Factsheet for Bra019370.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
peroxisome 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, peroxisome, vacuole
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX94103	Canola	nucleus	99.17	99.17
CDX98760	Canola	nucleus	98.89	98.89
CDX94101	Canola	cytosol	26.24	94.06
Bra013628.1-P	Field mustard	cytosol	83.15	93.77
AT4G22590.1	Thale cress	plastid	90.06	86.47
Solyc06g060600.1.1	Tomato	cytosol	59.39	67.61
VIT_02s0154g00110.t01	Wine grape	nucleus, peroxisome, plastid	72.65	66.92
VIT_00s0233g00030.t01	Wine grape	nucleus, peroxisome, plastid	72.38	66.67
PGSC0003DMT400035869	Potato	cytosol, nucleus, peroxisome	62.98	66.09
CDX98758	Canola	cytosol, nucleus, peroxisome	26.8	64.67
Solyc08g079060.2.1	Tomato	plastid	68.23	63.99
PGSC0003DMT400012219	Potato	plastid	67.13	63.28
KRH04085	Soybean	nucleus, plastid	61.88	61.88
GSMUA_Achr2P18640_001	Banana	cytosol	55.25	60.24
Bra022549.1-P	Field mustard	cytosol, plastid	62.43	59.63
GSMUA_Achr1P01710_001	Banana	plastid	65.19	59.6
GSMUA_Achr5P19860_001	Banana	plastid	62.15	59.21
GSMUA_Achr5P13510_001	Banana	plastid	64.36	58.84
GSMUA_Achr4P24650_001	Banana	cytosol	57.73	57.89
GSMUA_Achr5P15280_001	Banana	plastid	63.26	57.83
Bra028254.1-P	Field mustard	plastid	58.84	55.76
Bra010658.1-P	Field mustard	cytosol	48.9	51.3
Bra030256.1-P	Field mustard	cytosol	47.24	50.59
Bra011835.1-P	Field mustard	cytosol	47.51	49.86
VIT_11s0037g00720.t01	Wine grape	nucleus	15.19	49.55
Bra008344.1-P	Field mustard	plastid	48.62	46.68
Bra033634.1-P	Field mustard	cytosol	47.79	46.63
Bra015631.1-P	Field mustard	plastid	48.07	46.03
Bra006047.1-P	Field mustard	cytosol, nucleus, peroxisome, plastid	35.36	45.71
Bra024359.1-P	Field mustard	plastid	41.16	44.35
Bra031879.1-P	Field mustard	plastid	46.13	44.06
Bra009057.1-P	Field mustard	plastid	43.65	42.47
Bra034400.1-P	Field mustard	plastid	25.69	35.77

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	EnsemblPlantsGene:Bra019370	EnsemblPlants:Bra019370.1	EnsemblPlants:Bra019370.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975	GO:GO:0005992	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	UniProt:M4DS77	PFAM:PF02358	PANTHER:PTHR43768
PANTHER:PTHR43768:SF17	SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI0002540D9C

Description

AT4G22590 (E=4e-188) | trehalose-6-phosphate phosphatase, putative

Coordinates

chrA03:-:24609437..24611054

Molecular Weight (calculated)

41065.0 Da

IEP (calculated)

7.772

GRAVY (calculated)

-0.527

Length

362 amino acids

Sequence
(BLAST)

001: MDTDPESPTN KPRLASSFPS GRFMMKTRKK IPKLDDVRSN GWLEAMISSS PPRKRLVKDF NVEVAPEDDF AQRAWMLKYP SAITSFGHIA AQAKDKKIAM
101: FLDYDGTLSP IVDDPDRAIM SDAMRAAVKD VAKYFPTAII SGRSRDKVYE LVGLTELYYA GSHGMDIMTP ANVNGSPEDT NSDQQGEEVN LFQPAKEFIP
201: VIEEVYRSLV ELTKGIKGAK VENHKFCASV HYRNVDENDW PLVAQRVHDH LKQYPRLRLT HGRKVLEVRP VIEWNKGKAV EFLLESLGLS NNDDFLPIFI
301: GDDKTDEDAF KVLREKKQGF GILVSSVPKE SNAFYSLRDP SEVKKFLKTL VKWRKMEDST SQ

Best Arabidopsis Sequence Match ( AT4G22590.1 )
(BLAST)

001: MDLNINKTTP VLSDPTTPVS KTRLGSSFPS GRFMMNSRKK IPKLDDVRSN GWLDAMISSS PPRKRLVKDF NIEIAPEDDF SQRAWMLKYP SAITSFAHIA
101: AQAKNKKIAV FLDYDGTLSP IVDDPDRAIM SDAMRAAVKD VAKYFPTAII SGRSRDKVYQ LVGLTELYYA GSHGMDIMTP VNPNGSPEDP NCIKTTDQQG
201: EEVNLFQPAK EFIPVIEEVY NNLVEITKCI KGAKVENHKF CTSVHYRNVD EKDWPLVAQR VHDHLKRYPR LRITHGRKVL EVRPVIEWNK GKAVEFLLES
301: LGLSNNDEFL PIFIGDDKTD EDAFKVLREG NRGFGILVSS VPKESNAFYS LRDPSEVKKF LKTLVKWGKM ESSKTSF

Arabidopsis Description

TPPGTrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UWC3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.