Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019370.1-P | Field mustard | nucleus | 99.17 | 99.17 |
| CDX98760 | Canola | nucleus | 98.62 | 98.62 |
| CDX94101 | Canola | cytosol | 26.24 | 94.06 |
| CDX79165 | Canola | plastid | 92.27 | 89.07 |
| CDX82953 | Canola | plastid | 92.27 | 89.07 |
| AT4G22590.1 | Thale cress | plastid | 89.78 | 86.21 |
| Solyc06g060600.1.1 | Tomato | cytosol | 59.39 | 67.61 |
| VIT_02s0154g00110.t01 | Wine grape | nucleus, peroxisome, plastid | 72.93 | 67.18 |
| VIT_00s0233g00030.t01 | Wine grape | nucleus, peroxisome, plastid | 72.65 | 66.92 |
| PGSC0003DMT400035869 | Potato | cytosol, nucleus, peroxisome | 62.98 | 66.09 |
| CDX98758 | Canola | cytosol, nucleus, peroxisome | 26.8 | 64.67 |
| Solyc08g079060.2.1 | Tomato | plastid | 68.51 | 64.25 |
| PGSC0003DMT400012219 | Potato | plastid | 67.4 | 63.54 |
| KRH04085 | Soybean | nucleus, plastid | 61.88 | 61.88 |
| GSMUA_Achr2P18640_001 | Banana | cytosol | 54.97 | 59.94 |
| CDY66417 | Canola | plastid | 62.71 | 59.89 |
| GSMUA_Achr5P19860_001 | Banana | plastid | 62.43 | 59.47 |
| CDY56658 | Canola | plastid | 62.15 | 59.37 |
| GSMUA_Achr1P01710_001 | Banana | plastid | 64.92 | 59.34 |
| GSMUA_Achr5P13510_001 | Banana | plastid | 64.64 | 59.09 |
| GSMUA_Achr5P15280_001 | Banana | plastid | 63.26 | 57.83 |
| GSMUA_Achr4P24650_001 | Banana | cytosol | 57.46 | 57.62 |
| CDY70318 | Canola | mitochondrion | 36.74 | 57.08 |
| CDY00477 | Canola | plastid | 59.12 | 55.44 |
| CDX99919 | Canola | plastid | 58.84 | 55.04 |
| CDY26849 | Canola | mitochondrion | 34.53 | 53.65 |
| CDX90831 | Canola | mitochondrion | 10.5 | 52.78 |
| CDY15842 | Canola | cytosol | 46.69 | 50.0 |
| CDY63411 | Canola | cytosol | 46.41 | 49.56 |
| VIT_11s0037g00720.t01 | Wine grape | nucleus | 15.19 | 49.55 |
| CDX90361 | Canola | cytosol, peroxisome, plastid | 48.34 | 49.44 |
| CDY39454 | Canola | cytosol | 31.22 | 46.89 |
| CDY14635 | Canola | plastid | 48.34 | 46.42 |
| CDY26848 | Canola | plastid | 48.34 | 46.17 |
| CDY22393 | Canola | cytosol | 46.96 | 45.82 |
| CDX88416 | Canola | plastid | 47.24 | 45.24 |
| CDX87477 | Canola | plastid | 47.24 | 45.24 |
| CDX72676 | Canola | mitochondrion | 47.24 | 44.88 |
| CDY08815 | Canola | plastid | 44.75 | 44.63 |
| CDY31283 | Canola | plastid | 45.58 | 44.0 |
| CDY37091 | Canola | plastid | 25.69 | 35.77 |
| CDY14544 | Canola | endoplasmic reticulum, plasma membrane | 44.75 | 35.68 |
Protein Annotations
| MapMan:3.3.2 | Gene3D:3.30.70.1020 | Gene3D:3.40.50.1000 | GO:A0A078E3U0 | EnsemblPlants:CDX94103 | ProteinID:CDX94103 |
| ProteinID:CDX94103.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004805 | GO:GO:0005975 | GO:GO:0005992 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00157013001 |
| InterPro:HAD-SF_hydro_IIB | InterPro:HAD-like_sf | InterPro:HAD_sf | InterPro:IPR023214 | PFAM:PF02358 | PANTHER:PTHR43768 |
| PANTHER:PTHR43768:SF17 | SUPFAM:SSF56784 | TIGRFAMs:TIGR00685 | TIGRFAMs:TIGR01484 | InterPro:Trehalose_PPase | UniParc:UPI0004EB95FF |
Description
BnaC07g37370D
Coordinates
chrLK031879:-:701742..703880
Molecular Weight (calculated)
41009.0 Da
IEP (calculated)
7.775
GRAVY (calculated)
-0.512
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTDPESPTN KPRLGSSFPS GRFMMKTRKK IPKLDDVRSN GWLEAMISSS PPRKRLVKDF NVEVAPEDDF AQRAWMLKYP SAITSFGHIA AQAKDKKIAM
101: FLDYDGTLSP IVDDPDRAIM SDAMRAAVKD VAKYFPTAII SGRSRDKVYE LVGLTELYYA GSHGMDIMTP ANVNGSPEDT NSDQQGEEVN LFQPAKEFIP
201: VIEEVFRSLV ELTKGIKGAK VENHKFCASV HYRNVDENDW PLVAQRVHDH LKQYARLRLT HGRKVLEVRP VIEWNKGKAV EFLLESLGLS NNDDFLPIFI
301: GDDKTDEDAF KVLREKKQGF GILVSSVPKE SNAFYSLRDP SEVKKFLKTL VKWRKMEDST SQ
101: FLDYDGTLSP IVDDPDRAIM SDAMRAAVKD VAKYFPTAII SGRSRDKVYE LVGLTELYYA GSHGMDIMTP ANVNGSPEDT NSDQQGEEVN LFQPAKEFIP
201: VIEEVFRSLV ELTKGIKGAK VENHKFCASV HYRNVDENDW PLVAQRVHDH LKQYARLRLT HGRKVLEVRP VIEWNKGKAV EFLLESLGLS NNDDFLPIFI
301: GDDKTDEDAF KVLREKKQGF GILVSSVPKE SNAFYSLRDP SEVKKFLKTL VKWRKMEDST SQ
001: MDLNINKTTP VLSDPTTPVS KTRLGSSFPS GRFMMNSRKK IPKLDDVRSN GWLDAMISSS PPRKRLVKDF NIEIAPEDDF SQRAWMLKYP SAITSFAHIA
101: AQAKNKKIAV FLDYDGTLSP IVDDPDRAIM SDAMRAAVKD VAKYFPTAII SGRSRDKVYQ LVGLTELYYA GSHGMDIMTP VNPNGSPEDP NCIKTTDQQG
201: EEVNLFQPAK EFIPVIEEVY NNLVEITKCI KGAKVENHKF CTSVHYRNVD EKDWPLVAQR VHDHLKRYPR LRITHGRKVL EVRPVIEWNK GKAVEFLLES
301: LGLSNNDEFL PIFIGDDKTD EDAFKVLREG NRGFGILVSS VPKESNAFYS LRDPSEVKKF LKTLVKWGKM ESSKTSF
101: AQAKNKKIAV FLDYDGTLSP IVDDPDRAIM SDAMRAAVKD VAKYFPTAII SGRSRDKVYQ LVGLTELYYA GSHGMDIMTP VNPNGSPEDP NCIKTTDQQG
201: EEVNLFQPAK EFIPVIEEVY NNLVEITKCI KGAKVENHKF CTSVHYRNVD EKDWPLVAQR VHDHLKRYPR LRITHGRKVL EVRPVIEWNK GKAVEFLLES
301: LGLSNNDEFL PIFIGDDKTD EDAFKVLREG NRGFGILVSS VPKESNAFYS LRDPSEVKKF LKTLVKWGKM ESSKTSF
Arabidopsis Description
TPPGTrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UWC3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.