Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94101 | Canola | cytosol | 22.22 | 15.84 |
| CDY70318 | Canola | mitochondrion | 44.44 | 13.73 |
| CDY26849 | Canola | mitochondrion | 40.28 | 12.45 |
| CDX98760 | Canola | nucleus | 54.17 | 10.77 |
| CDX79165 | Canola | plastid | 55.56 | 10.67 |
| CDX82953 | Canola | plastid | 55.56 | 10.67 |
| CDX98758 | Canola | cytosol, nucleus, peroxisome | 22.22 | 10.67 |
| CDX94103 | Canola | nucleus | 52.78 | 10.5 |
| Os06t0222100-00 | Rice | cytosol | 52.78 | 9.6 |
| CDY66417 | Canola | plastid | 48.61 | 9.23 |
| CDY56658 | Canola | plastid | 48.61 | 9.23 |
| CDX72676 | Canola | mitochondrion | 48.61 | 9.19 |
| CDY15842 | Canola | cytosol | 43.06 | 9.17 |
| CDY63411 | Canola | cytosol | 43.06 | 9.14 |
| CDX90361 | Canola | cytosol, peroxisome, plastid | 44.44 | 9.04 |
| CDY22393 | Canola | cytosol | 45.83 | 8.89 |
| CDY00477 | Canola | plastid | 47.22 | 8.81 |
| CDX99919 | Canola | plastid | 47.22 | 8.79 |
| CDY14635 | Canola | plastid | 44.44 | 8.49 |
| CDX88416 | Canola | plastid | 44.44 | 8.47 |
| CDX87477 | Canola | plastid | 44.44 | 8.47 |
| CDY26848 | Canola | plastid | 44.44 | 8.44 |
| CDY39454 | Canola | cytosol | 26.39 | 7.88 |
| CDY31283 | Canola | plastid | 40.28 | 7.73 |
| CDY08815 | Canola | plastid | 38.89 | 7.71 |
| CDY14544 | Canola | endoplasmic reticulum, plasma membrane | 37.5 | 5.95 |
| CDY37091 | Canola | plastid | 11.11 | 3.08 |
Protein Annotations
| Gene3D:3.30.70.1020 | Gene3D:3.40.50.1000 | MapMan:35.1 | GO:A0A078DNJ2 | EnsemblPlants:CDX90831 | ProteinID:CDX90831 |
| ProteinID:CDX90831.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 | GO:GO:0005992 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00151541001 | InterPro:HAD-like_sf | InterPro:HAD_sf |
| InterPro:IPR023214 | PFAM:PF02358 | PANTHER:PTHR43768 | PANTHER:PTHR43768:SF17 | SUPFAM:SSF56784 | InterPro:Trehalose_PPase |
| UniParc:UPI0004EDFDAB | : | : | : | : | : |
Description
BnaA03g25110D
Coordinates
chrLK031864:-:748456..749537
Molecular Weight (calculated)
8446.3 Da
IEP (calculated)
10.768
GRAVY (calculated)
-0.511
Length
72 amino acids
Sequence
(BLAST)
(BLAST)
1: MNPTVSNRPT KRANNLVHYR NVDDKFWLDV IAQRLYGHLK QYPPLRLTHG GKVLEIRPVI DWNKGRAVEL LL
001: MDLNSNHKSS VLKDPSPSVN QSRLGVSSRF MMSQWKKPAK LDDVRSNGWL DAMISSSPPR KKLVKDFNVE VAPEDDFAQR AWMVKYPSAI SSFAHIAAQA
101: KKKKIAVFLD YDGTLSPIVD DPDRAIMSDA MRSAVKDVAS YFPTAIISGR SRDKVYQLVG LTELYYAGSH GMDIMTSSDG PNCFKSTDQQ GKEVNLFQPA
201: REFIPVIDEV FRTLVEKMKD IKGAKVENHK FCASVHYRNV DEKDWPIIAQ RVHDHLKQYP RLRLTHGRKV LEVRPVIDWN KGRAVEFLLE SLGLSNKDDL
301: LPIYIGDDTT DEDAFKVLRD GNRGFGILVS SIPKESNAFY SLRDPSEVKK FLKTLVKWAK LEKNSTGF
101: KKKKIAVFLD YDGTLSPIVD DPDRAIMSDA MRSAVKDVAS YFPTAIISGR SRDKVYQLVG LTELYYAGSH GMDIMTSSDG PNCFKSTDQQ GKEVNLFQPA
201: REFIPVIDEV FRTLVEKMKD IKGAKVENHK FCASVHYRNV DEKDWPIIAQ RVHDHLKQYP RLRLTHGRKV LEVRPVIDWN KGRAVEFLLE SLGLSNKDDL
301: LPIYIGDDTT DEDAFKVLRD GNRGFGILVS SIPKESNAFY SLRDPSEVKK FLKTLVKWAK LEKNSTGF
Arabidopsis Description
TPPFProbable trehalose-phosphate phosphatase F [Source:UniProtKB/Swiss-Prot;Acc:Q9SU39]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.