Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010658.1-P | Field mustard | cytosol | 96.61 | 99.13 |
| CDY39454 | Canola | cytosol | 65.54 | 96.27 |
| CDY70318 | Canola | mitochondrion | 59.04 | 89.7 |
| AT4G39770.1 | Thale cress | cytosol | 86.44 | 87.68 |
| CDY22393 | Canola | cytosol | 88.14 | 84.1 |
| CDX72676 | Canola | mitochondrion | 86.16 | 80.05 |
| CDY15842 | Canola | cytosol | 72.6 | 76.04 |
| CDY63411 | Canola | cytosol | 72.6 | 75.81 |
| PGSC0003DMT400056161 | Potato | cytosol | 45.48 | 75.23 |
| Solyc04g054930.2.1 | Tomato | cytosol, peroxisome, plastid | 63.56 | 70.98 |
| GSMUA_Achr9P12940_001 | Banana | cytosol, peroxisome, plastid | 53.67 | 68.35 |
| Solyc05g051880.2.1 | Tomato | plastid | 51.41 | 65.0 |
| VIT_00s0304g00080.t01 | Wine grape | cytosol, peroxisome | 67.51 | 64.08 |
| PGSC0003DMT400053144 | Potato | plastid | 66.67 | 61.14 |
| CDY26849 | Canola | mitochondrion | 39.83 | 60.52 |
| CDY08815 | Canola | plastid | 61.3 | 59.78 |
| CDY31283 | Canola | plastid | 62.43 | 58.93 |
| CDX94101 | Canola | cytosol | 16.67 | 58.42 |
| GSMUA_Achr6P30350_001 | Banana | plastid | 56.78 | 56.15 |
| GSMUA_AchrUn_... | Banana | peroxisome | 59.04 | 56.03 |
| GSMUA_Achr10P... | Banana | plastid | 57.91 | 55.41 |
| GSMUA_Achr10P... | Banana | plastid | 62.15 | 54.46 |
| GSMUA_Achr4P01810_001 | Banana | cytosol, peroxisome, plastid | 57.63 | 54.4 |
| CDX87477 | Canola | plastid | 57.06 | 53.44 |
| CDY14635 | Canola | plastid | 56.5 | 53.05 |
| CDY26848 | Canola | plastid | 56.21 | 52.51 |
| CDX88416 | Canola | plastid | 55.93 | 52.38 |
| CDX98760 | Canola | nucleus | 50.0 | 48.9 |
| CDY14544 | Canola | endoplasmic reticulum, plasma membrane | 62.43 | 48.68 |
| CDX94103 | Canola | nucleus | 49.44 | 48.34 |
| CDY66417 | Canola | plastid | 51.41 | 48.02 |
| CDY56658 | Canola | plastid | 51.41 | 48.02 |
| CDX82953 | Canola | plastid | 50.28 | 47.47 |
| CDX79165 | Canola | plastid | 50.28 | 47.47 |
| CDY00477 | Canola | plastid | 51.69 | 47.41 |
| CDX99919 | Canola | plastid | 51.41 | 47.03 |
| CDX90831 | Canola | mitochondrion | 9.04 | 44.44 |
| CDX98758 | Canola | cytosol, nucleus, peroxisome | 16.95 | 40.0 |
| OQU89414 | Sorghum | cytosol | 18.64 | 39.05 |
| CDY37091 | Canola | plastid | 24.29 | 33.08 |
Protein Annotations
| MapMan:3.3.2 | Gene3D:3.30.70.1020 | Gene3D:3.40.50.1000 | GO:A0A078DM67 | EnsemblPlants:CDX90361 | ProteinID:CDX90361 |
| ProteinID:CDX90361.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004805 | GO:GO:0005975 | GO:GO:0005992 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00150954001 |
| InterPro:HAD-SF_hydro_IIB | InterPro:HAD-like_sf | InterPro:HAD_sf | InterPro:IPR023214 | PFAM:PF02358 | PANTHER:PTHR43768 |
| PANTHER:PTHR43768:SF1 | SUPFAM:SSF56784 | TIGRFAMs:TIGR00685 | TIGRFAMs:TIGR01484 | InterPro:Trehalose_PPase | UniParc:UPI0004EDB614 |
Description
BnaA08g16230D
Coordinates
chrLK031862:-:1395051..1397416
Molecular Weight (calculated)
40291.6 Da
IEP (calculated)
8.110
GRAVY (calculated)
-0.384
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSVFMLLS VRFVEENTKH MEKETGNISN TDVTTLKKKV LQDLSINNGG GFVNSWVDSM RACSPTHLKS LMKQSSWLTE HPSALDMFEE ILHVSEGKQI
101: VMFLDYDGTL SPIVDDPDRA FMSKKMRRTV RKLAICFPTA IVSGRCREKV YNFVKLTELY YAGSHGMDIK GPAQGSKYKE GKSLLCQPAT EFLPMIDEVY
201: QKLVEKTKVT PGANVENNKF CASVHFRRVD EKNWSDLANQ VGSVIKEYPK LRITQGRKVL EIRPIIKWDK GKALEFLLES LGYANCTDVF PIYIGDDRTD
301: EDAFKILRDK RQGLGILVSK FPKETNASYS LQEPDEVMDF LQRLVEWEQL RSGA
101: VMFLDYDGTL SPIVDDPDRA FMSKKMRRTV RKLAICFPTA IVSGRCREKV YNFVKLTELY YAGSHGMDIK GPAQGSKYKE GKSLLCQPAT EFLPMIDEVY
201: QKLVEKTKVT PGANVENNKF CASVHFRRVD EKNWSDLANQ VGSVIKEYPK LRITQGRKVL EIRPIIKWDK GKALEFLLES LGYANCTDVF PIYIGDDRTD
301: EDAFKILRDK RQGLGILVSK FPKETNASYS LQEPDEVMDF LQRLVEWEQL RSGA
001: MVRFIEENTK LVEKETGNKS NNDVTTTKKK ALQDIIINNG VGLINSWVDS MRACSPTHLK SLLKQSSWLT EHPSALDMFE EILHLSEGKQ IVMFLDYDGT
101: LSPIVDDPDR AFMSRKMRRT VRKLANCFPT AIVSGRCIEK VYNFVKLTEL YYAGSHGMDI KGPEQGSKYE QILQDSKSLL CQPATEFLPM IDEVYHKLVE
201: KTKSTPGAQV ENNKFCVSVH FRRVDENNWS DLANQVRSVM KDYPKLRLTQ GRKVLEVRPI IKWDKGKALE FLLESLGYAN CTDVFPLYIG DDRTDEDAFK
301: VLRERRQGLG ILVSKFPKET SASYSLQEPD EVMEFLQRLV EWKQLRSGA
101: LSPIVDDPDR AFMSRKMRRT VRKLANCFPT AIVSGRCIEK VYNFVKLTEL YYAGSHGMDI KGPEQGSKYE QILQDSKSLL CQPATEFLPM IDEVYHKLVE
201: KTKSTPGAQV ENNKFCVSVH FRRVDENNWS DLANQVRSVM KDYPKLRLTQ GRKVLEVRPI IKWDKGKALE FLLESLGYAN CTDVFPLYIG DDRTDEDAFK
301: VLRERRQGLG ILVSKFPKET SASYSLQEPD EVMEFLQRLV EWKQLRSGA
Arabidopsis Description
TPPHProbable trehalose-phosphate phosphatase H [Source:UniProtKB/Swiss-Prot;Acc:Q8GWG2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.