CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, peroxisome, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024359.1-P	Field mustard	plastid	89.53	96.73
CDY31283	Canola	plastid	89.81	86.93
AT5G65140.1	Thale cress	plastid	87.33	85.68
CDY14544	Canola	endoplasmic reticulum, plasma membrane	96.14	76.87
KRH26019	Soybean	cytosol	19.56	74.74
PGSC0003DMT400056161	Potato	cytosol	42.7	72.43
KRH31279	Soybean	plastid	68.32	68.32
KRH75558	Soybean	cytosol, extracellular, peroxisome	12.4	68.18
KRG97593	Soybean	plastid	67.77	67.4
CDY70318	Canola	mitochondrion	42.98	66.95
Solyc04g054930.2.1	Tomato	cytosol, peroxisome, plastid	58.4	66.88
KRH43210	Soybean	cytosol, nucleus, peroxisome	66.67	66.12
KRH59366	Soybean	plastid	64.74	64.92
VIT_00s0304g00080.t01	Wine grape	cytosol, peroxisome	66.67	64.88
PGSC0003DMT400053144	Potato	plastid	67.77	63.73
Solyc05g051880.2.1	Tomato	plastid	49.04	63.57
CDY15842	Canola	cytosol	58.68	63.02
CDY63411	Canola	cytosol	58.4	62.54
CDY39454	Canola	cytosol	41.32	62.24
CDX90361	Canola	cytosol, peroxisome, plastid	59.78	61.3
GSMUA_Achr9P12940_001	Banana	cytosol, peroxisome, plastid	46.56	60.79
CDY26849	Canola	mitochondrion	38.02	59.23
CDY22393	Canola	cytosol	59.78	58.49
GSMUA_Achr6P30350_001	Banana	plastid	56.2	56.98
GSMUA_AchrUn_...	Banana	peroxisome	57.58	56.03
CDX72676	Canola	mitochondrion	58.4	55.64
CDY14635	Canola	plastid	57.3	55.17
CDX87477	Canola	plastid	57.3	55.03
CDY26848	Canola	plastid	57.02	54.62
CDX88416	Canola	plastid	56.47	54.23
GSMUA_Achr10P...	Banana	plastid	54.82	53.78
GSMUA_Achr10P...	Banana	plastid	57.85	51.98
GSMUA_Achr4P01810_001	Banana	cytosol, peroxisome, plastid	53.17	51.47
CDX94101	Canola	cytosol	13.5	48.51
CDY66417	Canola	plastid	47.11	45.12
CDY56658	Canola	plastid	47.11	45.12
CDX94103	Canola	nucleus	44.63	44.75
CDX98760	Canola	nucleus	44.63	44.75
CDY00477	Canola	plastid	46.56	43.78
CDX99919	Canola	plastid	46.56	43.67
CDX82953	Canola	plastid	44.9	43.47
CDX79165	Canola	plastid	44.9	43.47
CDX90831	Canola	mitochondrion	7.71	38.89
OQU89414	Sorghum	cytosol	17.36	37.28
CDY37091	Canola	plastid	26.17	36.54
CDX98758	Canola	cytosol, nucleus, peroxisome	13.77	33.33
KRH38605	Soybean	cytosol	42.7	29.98

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	GO:A0A078F2S2	UniProt:A0A078F2S2	EnsemblPlants:CDY08815
ProteinID:CDY08815	ProteinID:CDY08815.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975
GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00000775001	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF18	SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484
InterPro:Trehalose_PPase	UniParc:UPI0004EED98A	SEG:seg	:	:	:

Description

BnaA06g24090DTrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A078F2S2]

Coordinates

chrLK031989:+:697995..700016

Molecular Weight (calculated)

40630.8 Da

IEP (calculated)

9.596

GRAVY (calculated)

-0.379

Length

363 amino acids

Sequence
(BLAST)

001: MVNQNVVVPD ATTGIITVST VSNSSVFTPS AQKPPTAPGH ISISKKKLLK SLEINGDQSQ RLNSWVDSMR ASSPTHLKSL PSTSSEEELN SWMKRHPSAL
101: DMFERIIEAS RGKEIVMFLD YDGTLSPIVA DPDRAFISSK MRRTVKKLAK CFPTSIVTGR CIDKVYSFVK LAELYYAGSH GMDIKGPTKG FSRYNKDKPS
201: VLYQPAGDFL PMIDEAFKQL VEKTKSTPGA KVENNKFCLS VHFRCVDEKK WSELALKVRS VVKNYPTLKL SQGRKVFEIR PMIKWDKGKA LEFLLESLGF
301: DNSSDVFPIY IGDDRTDEDA FKLLQERGQG LGLLVTKFPK DTNASYSLQD PLEASTYTNI RTC

Best Arabidopsis Sequence Match ( AT5G65140.1 )
(BLAST)

001: MVSQNVVVSD AKTGIITVST VSNSSVFTPT AQKPPTAPGY ISVSKKKLLK NLEINGADQS QRLNSWVDSM RASSPTHLKS LSSFSSEEEH NSWIKRHPSA
101: LNMFERIIEE ARGKQIVMFL DYDGTLSPIV DDPDRAFMTS KMRRTVKKMA KCFPTSIVTG RCIDKVYSFV KLAELYYAGS HGMDIKGPTK GFSRYNKDKP
201: SVLYQPAGDF LPMIDEVYKQ LVEKTKSTPG AKVENNKFCL SVHFRCVDEK KWSELASKVR SVVKNYPTLK LSQGRKVFEI RPIIKWNKGK ALEFLLESLG
301: FENCNDVFPI YIGDDKTDED AFKLLRGRGQ GFGILVSKFP KDTSASYSLQ DPPEVMNFLG RLVEWKQMQQ

Arabidopsis Description

TPPJProbable trehalose-phosphate phosphatase J [Source:UniProtKB/Swiss-Prot;Acc:Q5HZ05]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.