Factsheet for GSMUA_Achr6P30350_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
peroxisome 1
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	plastid, vacuole
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	peroxisome	85.75	82.31
PGSC0003DMT400056161	Potato	cytosol	43.85	73.36
KRH26019	Soybean	cytosol	19.27	72.63
GSMUA_Achr10P...	Banana	plastid	79.61	70.54
GSMUA_Achr9P12940_001	Banana	cytosol, peroxisome, plastid	54.75	70.5
KRH75558	Soybean	cytosol, extracellular, peroxisome	12.57	68.18
Solyc04g054930.2.1	Tomato	cytosol, peroxisome, plastid	58.38	65.93
GSMUA_Achr10P...	Banana	plastid	66.2	64.05
GSMUA_Achr10P...	Banana	cytosol, plastid	59.22	62.35
CDY70318	Canola	mitochondrion	40.22	61.8
Solyc05g051880.2.1	Tomato	plastid	48.32	61.79
GSMUA_Achr2P22170_001	Banana	cytoskeleton, cytosol, peroxisome	57.26	61.75
VIT_00s0304g00080.t01	Wine grape	cytosol, peroxisome	64.25	61.66
KRH31279	Soybean	plastid	62.01	61.16
GSMUA_Achr4P01810_001	Banana	cytosol, peroxisome, plastid	63.97	61.07
KRG97593	Soybean	plastid	61.73	60.55
KRH43210	Soybean	cytosol, nucleus, peroxisome	61.73	60.38
Bra006047.1-P	Field mustard	cytosol, nucleus, peroxisome, plastid	47.21	60.36
GSMUA_Achr2P14790_001	Banana	cytosol	62.01	59.68
KRH59366	Soybean	plastid	60.34	59.67
PGSC0003DMT400053144	Potato	plastid	64.25	59.59
Bra011835.1-P	Field mustard	cytosol	56.98	59.13
GSMUA_Achr4P24170_001	Banana	cytosol	63.13	58.85
Bra010658.1-P	Field mustard	cytosol	56.15	58.26
Bra030256.1-P	Field mustard	cytosol	54.19	57.4
CDY15842	Canola	cytosol	54.19	57.4
GSMUA_Achr7P11700_001	Banana	plastid	61.45	57.29
GSMUA_Achr3P01660_001	Banana	cytosol, mitochondrion, plastid	62.01	57.07
AT4G39770.1	Thale cress	cytosol	55.59	57.02
CDY63411	Canola	cytosol	53.91	56.93
CDX90361	Canola	cytosol, peroxisome, plastid	56.15	56.78
AT5G10100.1	Thale cress	plastid	59.78	56.32
CDY08815	Canola	plastid	56.98	56.2
Bra024359.1-P	Field mustard	plastid	52.51	55.95
AT5G65140.1	Thale cress	plastid	57.54	55.68
CDY39454	Canola	cytosol	37.43	55.6
Bra009057.1-P	Field mustard	plastid	57.54	55.38
AT2G22190.1	Thale cress	cytosol, nucleus, peroxisome	54.75	55.37
CDY31283	Canola	plastid	57.82	55.2
Bra031879.1-P	Field mustard	plastid	57.54	54.35
CDY22393	Canola	cytosol	55.59	53.64
Bra033634.1-P	Field mustard	cytosol	55.59	53.64
CDX72676	Canola	mitochondrion	54.75	51.44
GSMUA_Achr2P18640_001	Banana	cytosol	45.25	48.8
GSMUA_Achr6P14300_001	Banana	cytosol, nucleus, peroxisome	47.49	48.16
GSMUA_Achr1P01710_001	Banana	plastid	51.96	46.97
GSMUA_Achr4P24650_001	Banana	cytosol	46.65	46.26
GSMUA_Achr5P15280_001	Banana	plastid	50.56	45.71
GSMUA_Achr5P13510_001	Banana	plastid	50.56	45.71
CDY14544	Canola	endoplasmic reticulum, plasma membrane	57.26	45.15
GSMUA_Achr5P19860_001	Banana	plastid	46.93	44.21
OQU89414	Sorghum	cytosol	20.11	42.6
GSMUA_Achr2P18630_001	Banana	cytosol, peroxisome, plastid	19.83	31.7
KRH38605	Soybean	cytosol	39.94	27.66

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805
GO:GO:0005975	GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr6G30350_001	EnsemblPlants:GSMUA_Achr6P30350_001	EnsemblPlants:GSMUA_Achr6T30350_001	InterPro:HAD-SF_hydro_IIB
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	UniProt:M0TBI0	PFAM:PF02358	PANTHER:PTHR43768
PANTHER:PTHR43768:SF1	SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI000295B4F8
SEG:seg	:	:	:	:	:

Description

uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G30350_001]

Coordinates

chr6:-:30359971..30362305

Molecular Weight (calculated)

39613.8 Da

IEP (calculated)

9.614

GRAVY (calculated)

-0.195

Length

358 amino acids

Sequence
(BLAST)

001: MTKQNVVPAD VVAAIAVASS YPLFPYPPPR AGGRKKYLSQ LELRGGRISA WVDSMKASSP THDKGVVALS GAPPSVDACL DEQSAWVMRH PSALTKFEHI
101: MSASKGKQIV MFLDYDGTLS PIVDDPDSAF MSDAMRAAVR DVARYFPTAI VSGRCLDKVI NFVRLANLYY AGSHGMDIKG PKKPRHTKAR AKPVVFQAAS
201: EFLPMIQAAY KALSERTKST AGVKVEDNKF CVSVHFRCVD EKSWSLLFEQ VRSVLKEYPK LWLTQGRKVL EIRPTINWDK GKALEFLLES LGFADCKNVM
301: PIYIGDDRTD EDAFKVLRDR GQGFGILVSR FPKETNATYS LKEPSEASAH GPSLSILF

Best Arabidopsis Sequence Match ( AT5G10100.2 )
(BLAST)

001: MSASQNIVVS ETTMSSIIPN NNNNNNNSSS QKLPPCLISI SKKKLLKNID IINGGGQRIN AWVDSMRASS PTHLKSLPSS ISTQQQLNSW IMQHPSALEK
101: FEQIMEASRG KQIVMFLDYD GTLSPIVDDP DKAFMSSKMR RTVKKLAKCF PTAIVTGRCI DKVYNFVKLA ELYYAGSHGM DIKGPAKGFS RHKRVKQSLL
201: YQPANDYLPM IDEVYRQLLE KTKSTPGAKV ENHKFCASVH FRCVDEKKWS ELVLQVRSVL KKFPTLQLTQ GRKVFEIRPM IEWDKGKALE FLLESLGFGN
301: TNNVFPVYIG DDRTDEDAFK MLRDRGEGFG ILVSKFPKDT DASYSLQDPS EASLNI

Arabidopsis Description

TPPITrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A2H1ZE62]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.