Factsheet for VIT_11s0037g00720.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0233g00030.t01	Wine grape	nucleus, peroxisome, plastid	68.47	19.34
VIT_02s0154g00110.t01	Wine grape	nucleus, peroxisome, plastid	67.57	19.08
Solyc06g060600.1.1	Tomato	cytosol	51.35	17.92
Bra013628.1-P	Field mustard	cytosol	48.65	16.82
KRH04085	Soybean	nucleus, plastid	54.05	16.57
PGSC0003DMT400035869	Potato	cytosol, nucleus, peroxisome	51.35	16.52
VIT_16s0022g00660.t01	Wine grape	plastid	53.15	15.32
CDX98760	Canola	nucleus	49.55	15.19
CDX94103	Canola	nucleus	49.55	15.19
Bra019370.1-P	Field mustard	nucleus	49.55	15.19
Solyc08g079060.2.1	Tomato	plastid	51.35	14.77
VIT_00s0304g00080.t01	Wine grape	cytosol, peroxisome	49.55	14.75
AT4G12430.1	Thale cress	plastid	48.65	14.67
PGSC0003DMT400012219	Potato	plastid	50.45	14.58
GSMUA_Achr5P19860_001	Banana	plastid	49.55	14.47
CDX82953	Canola	plastid	48.65	14.4
CDX79165	Canola	plastid	48.65	14.4
AT4G22590.1	Thale cress	plastid	48.65	14.32
GSMUA_Achr1P01710_001	Banana	plastid	49.55	13.89
VIT_18s0001g05300.t01	Wine grape	plastid	45.95	13.6
GSMUA_Achr4P24650_001	Banana	cytosol	44.14	13.57
GSMUA_Achr5P15280_001	Banana	plastid	47.75	13.38
GSMUA_Achr2P18640_001	Banana	cytosol	39.64	13.25
GSMUA_Achr5P13510_001	Banana	plastid	46.85	13.13
VIT_16s0050g02600.t01	Wine grape	mitochondrion	38.74	12.61
VIT_15s0046g01000.t01	Wine grape	cytosol, nucleus, peroxisome	32.43	12.46
CDX94101	Canola	cytosol	6.31	6.93
CDX98758	Canola	cytosol, nucleus, peroxisome	6.31	4.67

Protein Annotations

ArrayExpress:VIT_11s0037g00720	EMBL:FN596499	EnsemblPlants:VIT_11s0037g00720.t01	EnsemblPlantsGene:VIT_11s0037g00720	Gene3D:3.40.50.1000	InterPro:HAD_sf
InterPro:IPR023214	PANTHER:PTHR43768	PANTHER:PTHR43768:SF6	ProteinID:CBI36570	ProteinID:CBI36570.3	SEG:seg
UniParc:UPI0001BE47BE	UniProt:D7U1F4	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr11:-:9048757..9049505

Molecular Weight (calculated)

12512.1 Da

IEP (calculated)

8.447

GRAVY (calculated)

-0.233

Length

111 amino acids

Sequence
(BLAST)

001: MKSSSPPRKK FLKDFNVKVA TDDIDNVTSS WMLKYPSSAL NSFEKIINYP KSKKIVMFLD YDGTLSPVVD GPDRALMSDA IIECFSLILQ SISRQQSLVE
101: EAKTSLMNLK D

Best Arabidopsis Sequence Match ( AT4G22590.1 )
(BLAST)

001: MDLNINKTTP VLSDPTTPVS KTRLGSSFPS GRFMMNSRKK IPKLDDVRSN GWLDAMISSS PPRKRLVKDF NIEIAPEDDF SQRAWMLKYP SAITSFAHIA
101: AQAKNKKIAV FLDYDGTLSP IVDDPDRAIM SDAMRAAVKD VAKYFPTAII SGRSRDKVYQ LVGLTELYYA GSHGMDIMTP VNPNGSPEDP NCIKTTDQQG
201: EEVNLFQPAK EFIPVIEEVY NNLVEITKCI KGAKVENHKF CTSVHYRNVD EKDWPLVAQR VHDHLKRYPR LRITHGRKVL EVRPVIEWNK GKAVEFLLES
301: LGLSNNDEFL PIFIGDDKTD EDAFKVLREG NRGFGILVSS VPKESNAFYS LRDPSEVKKF LKTLVKWGKM ESSKTSF

Arabidopsis Description

TPPGTrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UWC3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.