Factsheet for VIT_15s0046g01000.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
plastid 1
vacuole 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06490	Soybean	cytosol	57.44	53.04
PGSC0003DMT400090449	Potato	cytosol	53.29	52.56
Solyc04g082550.1.1	Tomato	cytosol	52.94	52.22
VIT_16s0050g02600.t01	Wine grape	mitochondrion	61.25	51.91
PGSC0003DMT400095474	Potato	cytosol	38.06	51.89
GSMUA_Achr6P14300_001	Banana	cytosol, nucleus, peroxisome	57.09	46.74
VIT_00s0304g00080.t01	Wine grape	cytosol, peroxisome	54.33	42.09
VIT_16s0022g00660.t01	Wine grape	plastid	55.71	41.82
VIT_18s0001g05300.t01	Wine grape	plastid	53.98	41.6
VIT_02s0154g00110.t01	Wine grape	nucleus, peroxisome, plastid	53.63	39.44
VIT_00s0233g00030.t01	Wine grape	nucleus, peroxisome, plastid	52.25	38.42
VIT_11s0037g00720.t01	Wine grape	nucleus	12.46	32.43

Protein Annotations

EntrezGene:100248172	wikigene:100248172	MapMan:3.3.2	Gene3D:3.40.50.1000	EMBL:AM450508	ProteinID:CAN67648
ProteinID:CAN67648.1	ProteinID:CBI40506	ProteinID:CBI40506.3	UniProt:D7UCP1	EMBL:FN596755	GO:GO:0003674
GO:GO:0003824	GO:GO:0004805	GO:GO:0005575	GO:GO:0005975	GO:GO:0005992	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016311
GO:GO:0016787	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	EntrezGene:LOC100248172
wikigene:LOC100248172	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF4	SUPFAM:SSF56784	TIGRFAMs:TIGR00685
TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI0001BE5602	ArrayExpress:VIT_15s0046g01000	EnsemblPlantsGene:VIT_15s0046g01000	EnsemblPlants:VIT_15s0046g01000.t01
RefSeq:XP_002277162	RefSeq:XP_002277162.2	:	:	:	:

Description

Trehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:D7UCP1]

Coordinates

chr15:+:18071376..18073084

Molecular Weight (calculated)

32937.1 Da

IEP (calculated)

5.144

GRAVY (calculated)

-0.405

Length

289 amino acids

Sequence
(BLAST)

001: MEHPSALDEF EQIMSAIQHK KIVVFLDYDG TLSDIVDDPD KAFMTETMRS AVREVAECYP TAIISGRRRE KVQDFVKLDD IYYAGSHGMD IISPVCSNRF
101: GGQEHHRRVV DEKGNEIVLF QPAADFLPKV EGIFRLLTTR TKNIKGSRVE DNKFCVSVHF RCVHEKDTNA LKEVVESVLE DYPDFRVTRG KKVLEVRPLI
201: EWDKGHALEY LLDTLGFDSS DVVPIYLGDD RTDEDAFKMI TTRGEGYPII VSSIPKETKA SYSLRDTKEV MQFLQNLARW STNSSLGNS

Best Arabidopsis Sequence Match ( AT1G78090.1 )
(BLAST)

001: MTNQNVIVSD RKPILGLKTI TVSVSNSPLF SNSFPTYFNF PRRKLLKLLE AADKNNLVVA PKITSMIDSM RDSSPTRLRS SSYDSVSDND DKTSWIVRFP
101: SALNMFDEIV NAAKGKQIVM FLDYDGTLSP IVEDPDKAFI THEMREVVKD VASNFPTAIV TGRSIEKVRS FVQVNEIYYA GSHGMDIEGP TNENSNGQSN
201: ERVLFQPARE FLPMIEKVVN ILEEKTKWIP GAMVENNKFC LSVHFRRVDE KRWPALAEVV KSVLIDYPKL KLTQGRKVLE IRPTIKWDKG QALNFLLKSL
301: GYENSDDVVP VYIGDDRTDE DAFKVLRERG QGFGILVSKV PKDTNASYSL QDPSQVNKFL ERLVEWKRKT VGEE

Arabidopsis Description

TPPBTrehalose-phosphate phosphatase B [Source:UniProtKB/Swiss-Prot;Acc:Q9C9S4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.