Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G22590.1 | Thale cress | plastid | 83.15 | 81.17 |
| Solyc06g060600.1.1 | Tomato | cytosol | 60.33 | 69.81 |
| PGSC0003DMT400035869 | Potato | cytosol, nucleus, peroxisome | 64.67 | 68.99 |
| VIT_02s0154g00110.t01 | Wine grape | nucleus, peroxisome, plastid | 73.64 | 68.96 |
| VIT_00s0233g00030.t01 | Wine grape | nucleus, peroxisome, plastid | 73.37 | 68.7 |
| Solyc08g079060.2.1 | Tomato | plastid | 70.11 | 66.84 |
| PGSC0003DMT400012219 | Potato | plastid | 69.29 | 66.41 |
| KRH04085 | Soybean | nucleus, plastid | 62.23 | 63.26 |
| GSMUA_Achr1P01710_001 | Banana | plastid | 66.03 | 61.36 |
| GSMUA_Achr5P13510_001 | Banana | plastid | 65.76 | 61.11 |
| GSMUA_Achr5P19860_001 | Banana | plastid | 62.77 | 60.79 |
| GSMUA_Achr5P15280_001 | Banana | plastid | 64.13 | 59.6 |
| AT5G51460.3 | Thale cress | nucleus, plastid | 62.23 | 59.48 |
| GSMUA_Achr4P24650_001 | Banana | cytosol | 57.61 | 58.73 |
| GSMUA_Achr2P18640_001 | Banana | cytosol | 52.72 | 58.43 |
| AT1G35910.1 | Thale cress | plastid | 51.63 | 51.49 |
| AT4G39770.1 | Thale cress | cytosol | 47.01 | 49.57 |
| AT1G22210.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 42.93 | 49.38 |
| VIT_11s0037g00720.t01 | Wine grape | nucleus | 14.67 | 48.65 |
| AT2G22190.1 | Thale cress | cytosol, nucleus, peroxisome | 46.74 | 48.59 |
| AT5G65140.1 | Thale cress | plastid | 47.28 | 47.03 |
| AT1G78090.1 | Thale cress | plastid | 47.28 | 46.52 |
| AT5G10100.1 | Thale cress | plastid | 47.83 | 46.32 |
Protein Annotations
| MapMan:3.3.2 | Gene3D:3.30.70.1020 | Gene3D:3.40.50.1000 | EntrezGene:826855 | ProteinID:AEE83130.1 | ArrayExpress:AT4G12430 |
| EnsemblPlantsGene:AT4G12430 | RefSeq:AT4G12430 | TAIR:AT4G12430 | RefSeq:AT4G12430-TAIR-G | EnsemblPlants:AT4G12430.1 | TAIR:AT4G12430.1 |
| EMBL:AY059840 | Unigene:At.26607 | EMBL:BT002566 | ProteinID:CAB41713.1 | ProteinID:CAB78286.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004805 | GO:GO:0005975 | GO:GO:0005992 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016311 | GO:GO:0016787 | InterPro:HAD-SF_hydro_IIB | InterPro:HAD-like_sf |
| InterPro:HAD_sf | InterPro:IPR023214 | RefSeq:NP_192980.1 | PFAM:PF02358 | PO:PO:0000084 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR43768 | PANTHER:PTHR43768:SF17 |
| UniProt:Q9SU39 | SUPFAM:SSF56784 | TIGRFAMs:TIGR00685 | TIGRFAMs:TIGR01484 | Symbol:TPPF | InterPro:Trehalose_PPase |
| UniParc:UPI0000048940 | SEG:seg | : | : | : | : |
Description
TPPFProbable trehalose-phosphate phosphatase F [Source:UniProtKB/Swiss-Prot;Acc:Q9SU39]
Coordinates
chr4:-:7365257..7368730
Molecular Weight (calculated)
41609.8 Da
IEP (calculated)
9.571
GRAVY (calculated)
-0.450
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLNSNHKSS VLKDPSPSVN QSRLGVSSRF MMSQWKKPAK LDDVRSNGWL DAMISSSPPR KKLVKDFNVE VAPEDDFAQR AWMVKYPSAI SSFAHIAAQA
101: KKKKIAVFLD YDGTLSPIVD DPDRAIMSDA MRSAVKDVAS YFPTAIISGR SRDKVYQLVG LTELYYAGSH GMDIMTSSDG PNCFKSTDQQ GKEVNLFQPA
201: REFIPVIDEV FRTLVEKMKD IKGAKVENHK FCASVHYRNV DEKDWPIIAQ RVHDHLKQYP RLRLTHGRKV LEVRPVIDWN KGRAVEFLLE SLGLSNKDDL
301: LPIYIGDDTT DEDAFKVLRD GNRGFGILVS SIPKESNAFY SLRDPSEVKK FLKTLVKWAK LEKNSTGF
101: KKKKIAVFLD YDGTLSPIVD DPDRAIMSDA MRSAVKDVAS YFPTAIISGR SRDKVYQLVG LTELYYAGSH GMDIMTSSDG PNCFKSTDQQ GKEVNLFQPA
201: REFIPVIDEV FRTLVEKMKD IKGAKVENHK FCASVHYRNV DEKDWPIIAQ RVHDHLKQYP RLRLTHGRKV LEVRPVIDWN KGRAVEFLLE SLGLSNKDDL
301: LPIYIGDDTT DEDAFKVLRD GNRGFGILVS SIPKESNAFY SLRDPSEVKK FLKTLVKWAK LEKNSTGF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.