Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G200800.1 | Wheat | plastid | 88.67 | 98.66 |
| TraesCS5A01G190000.1 | Wheat | plastid | 88.67 | 98.66 |
| HORVU1Hr1G061580.4 | Barley | plastid | 43.37 | 88.67 |
| HORVU6Hr1G066240.1 | Barley | plastid | 30.12 | 86.21 |
| HORVU5Hr1G058300.1 | Barley | plastid | 88.19 | 85.71 |
| Os09t0369400-01 | Rice | plastid | 75.9 | 84.0 |
| EER96661 | Sorghum | plastid | 74.94 | 81.63 |
| Zm00001d005658_P001 | Maize | plastid | 71.81 | 77.6 |
| Zm00001d020272_P001 | Maize | peroxisome, plastid | 73.25 | 76.19 |
| CDY26849 | Canola | mitochondrion | 35.18 | 62.66 |
| KRH30218 | Soybean | plastid | 31.33 | 60.75 |
| VIT_18s0001g05300.t01 | Wine grape | plastid | 53.98 | 59.73 |
| KRH49582 | Soybean | mitochondrion | 40.72 | 59.3 |
| AT1G35910.1 | Thale cress | plastid | 52.53 | 59.08 |
| Solyc04g072920.2.1 | Tomato | extracellular | 51.57 | 58.63 |
| PGSC0003DMT400024511 | Potato | peroxisome, plastid | 51.33 | 58.36 |
| TraesCS6B01G330900.1 | Wheat | cytosol | 56.39 | 57.49 |
| TraesCS2B01G187200.1 | Wheat | cytosol, plastid | 49.4 | 57.26 |
| KRH18894 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 51.33 | 57.26 |
| TraesCS7B01G085800.1 | Wheat | peroxisome, plastid | 50.12 | 57.14 |
| KRH62370 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 51.08 | 57.14 |
| TraesCS2B01G187100.1 | Wheat | cytosol, plastid | 49.16 | 56.98 |
| AT1G22210.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 43.37 | 56.25 |
| KRH53087 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 51.33 | 56.05 |
| TraesCS2B01G187000.1 | Wheat | peroxisome, plastid | 48.19 | 55.87 |
| Bra008344.1-P | Field mustard | plastid | 50.12 | 55.17 |
| KRH16701 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 50.36 | 55.15 |
| Bra015631.1-P | Field mustard | plastid | 50.12 | 55.03 |
| CDY14635 | Canola | plastid | 49.64 | 54.64 |
| CDY26848 | Canola | plastid | 49.88 | 54.62 |
| AT1G78090.1 | Thale cress | plastid | 49.16 | 54.55 |
| CDX87477 | Canola | plastid | 49.64 | 54.5 |
| CDX88416 | Canola | plastid | 49.4 | 54.23 |
| TraesCS6B01G276300.1 | Wheat | plastid | 45.54 | 50.81 |
| TraesCS2B01G430700.1 | Wheat | plastid | 43.13 | 48.25 |
| TraesCS1B01G224300.2 | Wheat | golgi, vacuole | 43.61 | 41.32 |
| CDY37091 | Canola | plastid | 23.37 | 37.31 |
| Bra034400.1-P | Field mustard | plastid | 23.37 | 37.31 |
| TraesCS2B01G193300.1 | Wheat | plasma membrane | 34.46 | 25.58 |
Protein Annotations
| MapMan:3.3.2 | Gene3D:3.40.50.1000 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 | GO:GO:0005992 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:HAD-SF_hydro_IIB | InterPro:HAD-like_sf |
| InterPro:HAD_sf | InterPro:IPR023214 | PFAM:PF02358 | PANTHER:PTHR43768 | PANTHER:PTHR43768:SF13 | SUPFAM:SSF56784 |
| TIGRFAMs:TIGR00685 | TIGRFAMs:TIGR01484 | EnsemblPlantsGene:TraesCS5B01G193100 | EnsemblPlants:TraesCS5B01G193100.2 | InterPro:Trehalose_PPase | SEG:seg |
Description
No Description!
Coordinates
chr5B:-:348448315..348450149
Molecular Weight (calculated)
45628.6 Da
IEP (calculated)
8.485
GRAVY (calculated)
-0.030
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQTTVVVPE VGMTAATPTA CPCPGSLFPY PPPRAGMAVS RKCLRAAQAE LGAGMLSGLV ESMRASSPTH ARAAAALAAG VDDEHAAWMA RHPSALGKFE
101: EIVAASKGKQ IVMFLDYDGT LSPIVDDPDA AFMSETVSHS PPLFTLLPAV VFIVPAMHLC SVLTTCEHVI NFLIWNEQMR MAVRSVAKHF PTAIVSGRCR
201: DKVFEFVKLA ELYYAGSHGM DIKGPAKSSK SKAKGVLFQP ASEFLPMIEE VHQRLIEETK HVAGAKVENN KFCVSVHFRC VDEKSWGALA ETVKGVMREY
301: PKLRMSQGRM VFEVRPTIKW DKGKALEFLL ESLGFADCPN VLPVYIGDDR TDEDAFKVLR RRGQGVGILV SKHPKDTSAS FSLQEPAEVM EFLLRLVEWK
401: QLSRARLRLR RQADA
101: EIVAASKGKQ IVMFLDYDGT LSPIVDDPDA AFMSETVSHS PPLFTLLPAV VFIVPAMHLC SVLTTCEHVI NFLIWNEQMR MAVRSVAKHF PTAIVSGRCR
201: DKVFEFVKLA ELYYAGSHGM DIKGPAKSSK SKAKGVLFQP ASEFLPMIEE VHQRLIEETK HVAGAKVENN KFCVSVHFRC VDEKSWGALA ETVKGVMREY
301: PKLRMSQGRM VFEVRPTIKW DKGKALEFLL ESLGFADCPN VLPVYIGDDR TDEDAFKVLR RRGQGVGILV SKHPKDTSAS FSLQEPAEVM EFLLRLVEWK
401: QLSRARLRLR RQADA
001: MTNHNALISD AKGSIGVAVR VPNQSLFSPG GGRYISIPRK KLVQKLEADP SQTRIHTWIE AMRASSPTRT RPGNISPLPE SDEEDEYSSW MAQHPSALTM
101: FEEIAEASKG KQIVMFLDYD GTLSPIVENP DRAYMSEEMR EAVKGVARYF PTAIVTGRCR DKVRRFVKLP GLYYAGSHGM DIKGPSKRNK HNKNNKGVLF
201: QAANEFLPMI DKVSKCLVEK MRDIEGANVE NNKFCVSVHY RCVDQKDWGL VAEHVTSILS EYPKLRLTQG RKVLEIRPTI KWDKGKALEF LLESLGFANS
301: NDVLPIYIGD DRTDEDAFKV LRNKGQGFGI LVSKIPKETS ATYSLQEPSE VGEFLQRLVE WKQMSLRGR
101: FEEIAEASKG KQIVMFLDYD GTLSPIVENP DRAYMSEEMR EAVKGVARYF PTAIVTGRCR DKVRRFVKLP GLYYAGSHGM DIKGPSKRNK HNKNNKGVLF
201: QAANEFLPMI DKVSKCLVEK MRDIEGANVE NNKFCVSVHY RCVDQKDWGL VAEHVTSILS EYPKLRLTQG RKVLEIRPTI KWDKGKALEF LLESLGFANS
301: NDVLPIYIGD DRTDEDAFKV LRNKGQGFGI LVSKIPKETS ATYSLQEPSE VGEFLQRLVE WKQMSLRGR
Arabidopsis Description
TPPDProbable trehalose-phosphate phosphatase D [Source:UniProtKB/Swiss-Prot;Acc:Q67XC9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.