Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G200800.1 | Wheat | plastid | 98.93 | 98.93 |
| TraesCS5B01G193100.2 | Wheat | plastid | 98.66 | 88.67 |
| HORVU1Hr1G061580.4 | Barley | plastid | 47.19 | 86.7 |
| HORVU5Hr1G058300.1 | Barley | plastid | 96.78 | 84.54 |
| HORVU6Hr1G066240.1 | Barley | plastid | 32.44 | 83.45 |
| Os09t0369400-01 | Rice | plastid | 83.65 | 83.2 |
| EER96661 | Sorghum | plastid | 82.84 | 81.1 |
| Zm00001d005658_P001 | Maize | plastid | 79.62 | 77.34 |
| Zm00001d020272_P001 | Maize | peroxisome, plastid | 80.16 | 74.94 |
| CDY26849 | Canola | mitochondrion | 39.14 | 62.66 |
| KRH30218 | Soybean | plastid | 34.85 | 60.75 |
| VIT_18s0001g05300.t01 | Wine grape | plastid | 60.05 | 59.73 |
| KRH49582 | Soybean | mitochondrion | 45.31 | 59.3 |
| AT1G35910.1 | Thale cress | plastid | 58.45 | 59.08 |
| Solyc04g072920.2.1 | Tomato | extracellular | 57.64 | 58.9 |
| PGSC0003DMT400024511 | Potato | peroxisome, plastid | 57.37 | 58.63 |
| TraesCS2A01G161100.1 | Wheat | cytosol, plastid | 54.96 | 57.26 |
| KRH18894 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 57.1 | 57.26 |
| TraesCS7A01G180800.1 | Wheat | peroxisome, plastid | 55.23 | 57.06 |
| KRH62370 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 56.57 | 56.87 |
| TraesCS6A01G301800.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 63.27 | 56.73 |
| TraesCS2A01G161200.1 | Wheat | cytosol, plastid | 54.42 | 56.7 |
| TraesCS2A01G161000.1 | Wheat | plastid | 54.16 | 56.58 |
| AT1G22210.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 48.26 | 56.25 |
| KRH53087 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 56.84 | 55.79 |
| Bra008344.1-P | Field mustard | plastid | 55.5 | 54.91 |
| KRH16701 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 55.76 | 54.88 |
| Bra015631.1-P | Field mustard | plastid | 55.5 | 54.76 |
| CDY14635 | Canola | plastid | 54.96 | 54.38 |
| CDY26848 | Canola | plastid | 55.23 | 54.35 |
| AT1G78090.1 | Thale cress | plastid | 54.42 | 54.28 |
| CDX87477 | Canola | plastid | 54.96 | 54.23 |
| CDX88416 | Canola | plastid | 54.69 | 53.97 |
| TraesCS6A01G248400.1 | Wheat | cytosol, plastid | 51.21 | 51.34 |
| TraesCS2A01G167100.1 | Wheat | nucleus, peroxisome, plastid | 34.05 | 51.0 |
| TraesCS2A01G412100.1 | Wheat | plastid | 47.99 | 48.38 |
| TraesCS1A01G210400.1 | Wheat | plastid | 49.33 | 48.29 |
| CDY37091 | Canola | plastid | 26.01 | 37.31 |
| Bra034400.1-P | Field mustard | plastid | 26.01 | 37.31 |
| TraesCS3A01G085700.1 | Wheat | vacuole | 35.12 | 23.69 |
| TraesCS2A01G167200.1 | Wheat | extracellular | 4.83 | 6.84 |
Protein Annotations
| MapMan:3.3.2 | Gene3D:3.40.50.1000 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 | GO:GO:0005992 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:HAD-SF_hydro_IIB | InterPro:HAD-like_sf |
| InterPro:HAD_sf | InterPro:IPR023214 | PFAM:PF02358 | PANTHER:PTHR43768 | PANTHER:PTHR43768:SF13 | SUPFAM:SSF56784 |
| TIGRFAMs:TIGR00685 | TIGRFAMs:TIGR01484 | EnsemblPlantsGene:TraesCS5A01G190000 | EnsemblPlants:TraesCS5A01G190000.1 | InterPro:Trehalose_PPase | TIGR:cd01627 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:394181403..394183239
Molecular Weight (calculated)
40854.7 Da
IEP (calculated)
9.023
GRAVY (calculated)
-0.144
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQTTVVVPE VGMTAPAPTA CPCPGSLFPY PPPRAGMAVS RKCLRAAQAE LGAGMLSGLV ESMRASSPTH ARAAAALAAG VDDEHAAWMA KHPSALGKFE
101: EIVAASKGKQ IVMFLDYDGT LSPIVDDPDA AFMSETMRMA VRSVAKHFPT AIVSGRCRDK VFDFVKLAEL YYAGSHGMDI KGPAKSSKSK AKGVLFQPAS
201: EFLPMIEEVH QRLIEETKHV AGAKVENNKF CVSVHFRCVD EKSWGALAET VKGVMREYPK LRMSQGRMVF EVRPTIKWDK GKALEFLLES LGFADCPNVL
301: PVYIGDDRTD EDAFKVLRRR GQGVGILVSK HPKDTSASFS LQEPAEVMEF LLRLVEWKQL SKARLRLRRQ ADA
101: EIVAASKGKQ IVMFLDYDGT LSPIVDDPDA AFMSETMRMA VRSVAKHFPT AIVSGRCRDK VFDFVKLAEL YYAGSHGMDI KGPAKSSKSK AKGVLFQPAS
201: EFLPMIEEVH QRLIEETKHV AGAKVENNKF CVSVHFRCVD EKSWGALAET VKGVMREYPK LRMSQGRMVF EVRPTIKWDK GKALEFLLES LGFADCPNVL
301: PVYIGDDRTD EDAFKVLRRR GQGVGILVSK HPKDTSASFS LQEPAEVMEF LLRLVEWKQL SKARLRLRRQ ADA
001: MVRFIEENTK LVEKETGNKS NNDVTTTKKK ALQDIIINNG VGLINSWVDS MRACSPTHLK SLLKQSSWLT EHPSALDMFE EILHLSEGKQ IVMFLDYDGT
101: LSPIVDDPDR AFMSRKMRRT VRKLANCFPT AIVSGRCIEK VYNFVKLTEL YYAGSHGMDI KGPEQGSKYE QILQDSKSLL CQPATEFLPM IDEVYHKLVE
201: KTKSTPGAQV ENNKFCVSVH FRRVDENNWS DLANQVRSVM KDYPKLRLTQ GRKVLEVRPI IKWDKGKALE FLLESLGYAN CTDVFPLYIG DDRTDEDAFK
301: VLRERRQGLG ILVSKFPKET SASYSLQEPD EVMEFLQRLV EWKQLRSGA
101: LSPIVDDPDR AFMSRKMRRT VRKLANCFPT AIVSGRCIEK VYNFVKLTEL YYAGSHGMDI KGPEQGSKYE QILQDSKSLL CQPATEFLPM IDEVYHKLVE
201: KTKSTPGAQV ENNKFCVSVH FRRVDENNWS DLANQVRSVM KDYPKLRLTQ GRKVLEVRPI IKWDKGKALE FLLESLGYAN CTDVFPLYIG DDRTDEDAFK
301: VLRERRQGLG ILVSKFPKET SASYSLQEPD EVMEFLQRLV EWKQLRSGA
Arabidopsis Description
TPPHProbable trehalose-phosphate phosphatase H [Source:UniProtKB/Swiss-Prot;Acc:Q8GWG2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.