Factsheet for TraesCS6A01G248400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G230500.1	Wheat	cytosol, plastid	98.39	98.39
TraesCS6B01G276300.1	Wheat	plastid	97.58	97.58
HORVU6Hr1G063370.1	Barley	plastid	96.51	96.77
HORVU0Hr1G023540.3	Barley	plastid	96.51	96.77
Os02t0661100-01	Rice	cytosol, nucleus, peroxisome, plastid	84.41	84.64
OQU85690	Sorghum	nucleus, plastid	80.11	80.54
TraesCS2A01G412100.1	Wheat	plastid	62.9	63.24
Zm00001d017502_P002	Maize	extracellular	70.7	59.37
TraesCS1A01G210400.1	Wheat	plastid	57.26	55.91
TraesCS2A01G167100.1	Wheat	nucleus, peroxisome, plastid	35.75	53.41
TraesCS5A01G190000.1	Wheat	plastid	51.34	51.21
TraesCS7A01G180800.1	Wheat	peroxisome, plastid	48.39	49.86
TraesCS2A01G161000.1	Wheat	plastid	46.77	48.74
TraesCS2A01G161100.1	Wheat	cytosol, plastid	46.24	48.04
TraesCS2A01G161200.1	Wheat	cytosol, plastid	45.43	47.21
TraesCS6A01G301800.1	Wheat	cytosol, nucleus, peroxisome, plastid	48.66	43.51
TraesCS3A01G085700.1	Wheat	vacuole	36.29	24.41
TraesCS2A01G167200.1	Wheat	extracellular	5.91	8.37

Protein Annotations

MapMan:3.3.2	Gene3D:3.40.50.1000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975
GO:GO:0005992	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009409
GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF14	SUPFAM:SSF56784
TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	EnsemblPlantsGene:TraesCS6A01G248400	EnsemblPlants:TraesCS6A01G248400.1	InterPro:Trehalose_PPase	TIGR:cd01627
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:461145380..461147406

Molecular Weight (calculated)

41116.4 Da

IEP (calculated)

5.757

GRAVY (calculated)

-0.218

Length

372 amino acids

Sequence
(BLAST)

001: MDLSNGSPVI SDPMSMSQSL MGVLPSNMMP FSVRPGGYSG AGGAGVNVSR RKIEEVLVSG LLDAMKSSSP RKKHNVVFGQ ENLPEEDPAY SAWMAKCPSA
101: LASFKQIVAS AQGKKIAVFL DYDGTLSPIV DDPEKAVMSP VMRAAVRNVA KYFPAAIVSG RSRKKVLEFV KLKELCYAGS HGMDIMTSSS AHYEHNAEKG
201: KEANLFQPAR DFLPMIDEVS KALLEVTRGI EGASVEDNKF CVSVHYRNVD EKDWELVARL VNEVLEDFPT LKVTNGRMVL EVRPVIDWDK GKAVEFLLQS
301: LGLSDPENVI PIYIGDDRTD EDAFKVLRER NCGYGILVSQ APKETEAFYS LRDPSEVMEF LNSLVRWKKH SL

Best Arabidopsis Sequence Match ( AT5G51460.1 )
(BLAST)

001: MDMKSGHSSP VMTDSPPISN SRLTIRQNRL PYSSAAATAI SQNNNLLLTV PRKKTGILDD VKSNGWLDAM KSSSPPPTIL NKDNLSNDAT DMTYREWMQL
101: KYPSALTSFE KIMSFAKGKR IALFLDYDGT LSPIVEEPDC AYMSSAMRSA VQNVAKYFPT AIISGRSRDK VYEFVNLSEL YYAGSHGMDI MSPAGESLNH
201: EHSRTVSVYE QGKDVNLFQP ASEFLPMIDK VLCSLIESTK DIKGVKVEDN KFCISVHYRN VEEKNWTLVA QCVDDVIRTY PKLRLTHGRK VLEIRPVIDW
301: DKGKAVTFLL ESLGLNNCED VLPIYVGDDR TDEDAFKVLR DGPNHGYGIL VSAVPKDSNA FYSLRDPSEV MEFLKSLVTW KRSMG

Arabidopsis Description

TPPATrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UCG0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.