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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • plastid 1
  • plasma membrane 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
YLoc:plasma membrane
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY19574 Canola plasma membrane 68.28 58.64
KRH47020 Soybean golgi, plasma membrane 70.21 49.25
TraesCS7D01G252900.4 Wheat cytosol 88.59 42.29
HORVU7Hr1G052560.3 Barley cytosol, peroxisome, plasma membrane 88.2 42.14
TraesCS7A01G254400.1 Wheat plasma membrane 88.01 42.01
TraesCS7B01G150600.7 Wheat plasma membrane 87.23 41.64
EES15337 Sorghum cytosol, nucleus, plasma membrane 86.46 41.12
GSMUA_AchrUn_... Banana plasma membrane 68.67 40.16
Zm00001d031543_P005 Maize cytosol 79.88 37.17
GSMUA_Achr1P23580_001 Banana plasma membrane 72.15 34.57
VIT_11s0052g00320.t01 Wine grape plasma membrane 71.57 34.26
KRH12351 Soybean cytosol, nucleus, peroxisome 70.02 33.46
KRH37353 Soybean plasma membrane 70.02 33.36
Os04t0605500-02 Rice plasma membrane 70.21 33.36
KRH44631 Soybean nucleus 70.21 33.24
Bra024117.1-P Field mustard plasma membrane 68.09 33.18
AT5G57110.2 Thale cress plasma membrane 68.86 33.15
CDY30184 Canola plasma membrane 68.09 33.15
CDY43534 Canola cytosol 67.89 33.11
Os02t0176700-00 Rice plasma membrane 58.99 33.04
KRH09610 Soybean plasma membrane 69.63 33.0
CDY20693 Canola cytosol 68.28 32.99
CDX68595 Canola plasma membrane 67.5 32.99
Bra035649.1-P Field mustard cytosol 68.47 32.9
Bra011144.1-P Field mustard cytosol 67.7 32.74
CDY46716 Canola cytosol 67.89 32.71
Solyc07g008320.2.1 Tomato nucleus 68.28 32.65
KRH23705 Soybean nucleus, plastid 69.63 32.64
CDY38264 Canola plasma membrane 67.5 32.53
Bra002762.1-P Field mustard plasma membrane 67.5 32.53
Solyc03g123890.2.1 Tomato plasma membrane 65.57 32.38
AT4G29900.1 Thale cress plasma membrane 66.92 32.37
Bra031259.1-P Field mustard plasma membrane 68.28 32.24
CDY50072 Canola plasma membrane 68.09 32.15
CDX82212 Canola plasma membrane 67.7 32.11
CDY32412 Canola plasma membrane 67.7 32.11
GSMUA_AchrUn_... Banana plasma membrane 71.37 32.09
AT3G21180.1 Thale cress cytosol, plasma membrane, plastid 67.31 32.04
CDY37311 Canola plasma membrane 67.5 31.99
CDY19575 Canola plasma membrane 67.7 31.96
CDY27537 Canola plasma membrane 67.5 31.96
GSMUA_Achr4P05790_001 Banana plasma membrane, plastid 70.99 31.89
Bra023899.1-P Field mustard plasma membrane 67.5 31.84
KRH02761 Soybean cytosol, nucleus, peroxisome 65.96 31.63
CDY32902 Canola plasma membrane 68.09 31.37
KRH19116 Soybean cytosol 64.8 31.19
VIT_09s0018g02130.t01 Wine grape plasma membrane 67.89 30.93
CDY53981 Canola cytosol 67.12 29.97
Os10t0418100-01 Rice golgi 52.03 25.99
Os03t0203700-01 Rice plasma membrane 48.55 24.63
Os12t0586600-01 Rice plasma membrane 47.78 24.22
Os12t0136900-00 Rice plasma membrane 47.58 23.68
Os01t0939100-01 Rice plasma membrane 46.42 23.01
Os05t0495600-00 Rice plasma membrane 47.0 22.99
Os03t0616400-01 Rice plastid 45.26 22.65
Os11t0140400-01 Rice cytosol 36.56 21.05
Os05t0120700-01 Rice plasma membrane 11.03 20.28
Os03t0281600-01 Rice plasma membrane 23.21 14.2
Os03t0730800-01 Rice plasma membrane 9.48 7.66
KRH47024 Soybean cytosol, nucleus, plasma membrane 0.0 0.0
Protein Annotations
Gene3D:1.20.1110.10MapMan:24.1.2.2.2Gene3D:3.40.1110.10Gene3D:3.40.50.1000UniProt:A0A0P0XIC3InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cation-transptr_CInterPro:ATPase_P-typ_cyto_dom_NProteinID:BAT06247.1ProteinID:BAT06248.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005215GO:GO:0005388GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0070588
GO:GO:0099132InterPro:HAD-like_sfInterPro:HAD_sfInterPro:IPR023214InterPro:IPR023299EnsemblPlantsGene:Os08g0517200
EnsemblPlants:Os08t0517200-02InterPro:P-type_ATPase_IIBPFAM:PF00689PFAM:PF00702PFAM:PF13246PRINTS:PR00119
PRINTS:PR00120PANTHER:PTHR24093PANTHER:PTHR24093:SF415InterPro:P_typ_ATPaseSUPFAM:SSF56784SUPFAM:SSF81660
SUPFAM:SSF81665TIGRFAMs:TIGR01494TIGRFAMs:TIGR01517TMHMM:TMhelixUniParc:UPI000393979FSEG:seg
Description
Functioning in Cesium Over-transport 2Similar to autoinhibited calcium ATPase. (Os08t0517200-01);Similar to Cation transporting ATPase, C-terminal. (Os08t0517200-02);Similar to P-type ATPase (Fragment). (Os08t0517200-03)
Coordinates
chr8:-:25652085..25658556
Molecular Weight (calculated)
57447.8 Da
IEP (calculated)
7.340
GRAVY (calculated)
0.074
Length
517 amino acids
Sequence
(BLAST)
001: GMDFNDARSK SQILHVFPFN SEKKRGGVAV QSDAGVHVHW KGAAELVLSS CKSWLALDGS VQPMSAEKYN ECKKSIEDMA TSSLRCVAFA YCPCEIERIP
101: KEDIADWKLP EDDLTLLCIV GIKDPCRPGV KSAVQLCTNA GVKVRMVTGD NIETAKAIAL ECGILDANGA FVEPFVIEGK VFREMSEAAR GDIVDKITVM
201: GRSSPNDKLL LVQALKRKGH VVAVTGDGTN DAPALHEADI GLSMGISGTE VAKESSDIII LDDNFTSVVK VVRWGRSVYA NIQKFIQFQL TVNVAALVIN
301: VVAAVSSGDV PLNAVELLWV NLIMDTLGAL ALATEPPTDN LMKRQPVGRR EPLVTNIMWR NLFVQAIYQI AILLIFDFSG RSILRLQNDS REDAEKTQNT
401: FIFNTFVFCQ IFNEFNARKP EERNVFKGIT KNHLFMGIIA ITTVFQILII EFLGKFFKTV RLNWRLWLVS VAIGIISWPL AYLGKFIPVP VRPLQDYFKP
501: TCWRRASRRD EEESGQS
Best Arabidopsis Sequence Match ( AT4G29900.1 )
(BLAST)
0001: MSGQFNNSPR GEDKDVEAGT SSFTEYEDSP FDIASTKNAP VERLRRWRQA ALVLNASRRF RYTLDLKREE DKKQMLRKMR AHAQAIRAAH LFKAAASRVT
0101: GIASPLPTPG GGDFGIGQEQ IVSISRDQNI GALQELGGVR GLSDLLKTNL EKGIHGDDDD ILKRKSAFGS NTYPQKKGRS FWRFVWEASQ DLTLIILIVA
0201: AVASLALGIK TEGIEKGWYD GISIAFAVLL VIVVTATSDY RQSLQFQNLN EEKRNIRLEV TRDGRRVEIS IYDIVVGDVI PLNIGDQVPA DGVLVAGHSL
0301: AVDESSMTGE SKIVQKNSTK HPFLMSGCKV ADGNGTMLVT GVGVNTEWGL LMASVSEDNG GETPLQVRLN GVATFIGIVG LTVAGVVLFV LVVRYFTGHT
0401: KNEQGGPQFI GGKTKFEHVL DDLVEIFTVA VTIVVVAVPE GLPLAVTLTL AYSMRKMMAD KALVRRLSAC ETMGSATTIC SDKTGTLTLN EMTVVECYAG
0501: LQKMDSPDSS SKLPSAFTSI LVEGIAHNTT GSVFRSESGE IQVSGSPTER AILNWAIKLG MDFDALKSES SAVQFFPFNS EKKRGGVAVK SPDSSVHIHW
0601: KGAAEIVLGS CTHYMDESES FVDMSEDKMG GLKDAIDDMA ARSLRCVAIA FRTFEADKIP TDEEQLSRWE LPEDDLILLA IVGIKDPCRP GVKNSVLLCQ
0701: QAGVKVRMVT GDNIQTAKAI ALECGILASD SDASEPNLIE GKVFRSYSEE ERDRICEEIS VMGRSSPNDK LLLVQSLKRR GHVVAVTGDG TNDAPALHEA
0801: DIGLAMGIQG TEVAKEKSDI IILDDNFESV VKVVRWGRSV YANIQKFIQF QLTVNVAALV INVVAAISAG EVPLTAVQLL WVNLIMDTLG ALALATEPPT
0901: DHLMDRAPVG RREPLITNIM WRNLFIQAMY QVTVLLILNF RGISILHLKS KPNAERVKNT VIFNAFVICQ VFNEFNARKP DEINIFRGVL RNHLFVGIIS
1001: ITIVLQVVIV EFLGTFASTT KLDWEMWLVC IGIGSISWPL AVIGKLIPVP ETPVSQYFRI NRWRRNSSG
Arabidopsis Description
ACA10Calcium-transporting ATPase 10, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9SZR1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.