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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • nucleus 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:cytosol
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX82212 Canola plasma membrane 99.72 99.72
CDY19574 Canola plasma membrane 53.49 96.84
CDY27537 Canola plasma membrane 96.24 96.06
CDY37311 Canola plasma membrane 95.78 95.69
CDY50072 Canola plasma membrane 95.69 95.25
AT3G21180.1 Thale cress cytosol, plasma membrane, plastid 94.68 95.03
CDY19575 Canola plasma membrane 95.41 94.98
KRH47020 Soybean golgi, plasma membrane 53.21 78.7
KRH44631 Soybean nucleus 75.05 74.91
KRH09610 Soybean plasma membrane 74.31 74.24
KRH23705 Soybean nucleus, plastid 74.68 73.8
Solyc03g123890.2.1 Tomato plasma membrane 69.17 72.02
VIT_09s0018g02130.t01 Wine grape plasma membrane 73.39 70.48
CDX68595 Canola plasma membrane 67.8 69.85
CDY43534 Canola cytosol 67.8 69.72
CDY46716 Canola cytosol 68.07 69.15
CDY30184 Canola plasma membrane 67.06 68.83
CDY20693 Canola cytosol 67.34 68.6
CDY38264 Canola plasma membrane 67.52 68.59
Os08t0517200-02 Rice plasma membrane 32.11 67.7
Os02t0176700-00 Rice plasma membrane 56.88 67.17
EES12809 Sorghum plasma membrane 67.25 67.12
Zm00001d002396_P012 Maize nucleus, plasma membrane, plastid 66.7 67.0
HORVU6Hr1G030590.16 Barley cytosol, nucleus, plasma membrane 66.97 66.79
Os04t0605500-02 Rice plasma membrane 66.33 66.45
KRH47024 Soybean cytosol, nucleus, plasma membrane 21.47 66.29
TraesCS6A01G152700.2 Wheat cytosol 66.51 66.27
TraesCS2D01G430700.1 Wheat plasma membrane 65.6 66.27
TraesCS6D01G142400.1 Wheat cytosol, nucleus, plasma membrane 66.42 66.24
TraesCS2A01G432700.1 Wheat plastid, unclear 65.69 66.23
HORVU2Hr1G101040.4 Barley plasma membrane 65.78 66.14
TraesCS6B01G180700.3 Wheat cytosol, nucleus, plasma membrane 66.42 66.0
TraesCS5D01G284100.3 Wheat plasma membrane 64.86 65.77
TraesCS5B01G276500.1 Wheat plasma membrane 64.77 65.61
CDY32902 Canola plasma membrane 67.34 65.42
TraesCS2B01G454000.1 Wheat plasma membrane 65.41 65.35
EES15337 Sorghum cytosol, nucleus, plasma membrane 65.14 65.32
TraesCS7A01G254400.1 Wheat plasma membrane 64.5 64.91
TraesCS7D01G252900.4 Wheat cytosol 64.5 64.91
HORVU7Hr1G052560.3 Barley cytosol, peroxisome, plasma membrane 64.22 64.69
KXG29596 Sorghum cytosol, nucleus, plasma membrane 64.68 64.62
EER99121 Sorghum cytosol, peroxisome, plasma membrane 63.67 64.56
TraesCS5A01G276700.4 Wheat plasma membrane 64.68 64.15
TraesCS7B01G150600.7 Wheat plasma membrane 63.39 63.8
CDY53981 Canola cytosol 67.61 63.64
Zm00001d026253_P002 Maize peroxisome, plasma membrane, plastid 61.47 60.69
HORVU5Hr1G075050.19 Barley plastid 63.12 60.14
Zm00001d031543_P005 Maize cytosol 61.01 59.86
Zm00001d020985_P002 Maize cytosol, peroxisome, plasma membrane 62.02 59.09
Zm00001d015446_P016 Maize plasma membrane 60.37 58.54
CDY65296 Canola cytosol 3.3 54.55
CDY40822 Canola plasma membrane 49.63 53.25
CDY34219 Canola plasma membrane 49.54 53.1
CDX89371 Canola plasma membrane 16.33 52.98
CDY10680 Canola plasma membrane 48.99 52.66
CDY10319 Canola plasma membrane 49.27 52.39
CDX93910 Canola plasma membrane 47.98 50.63
CDY65295 Canola cytosol 12.2 50.19
CDY22420 Canola plasma membrane 46.05 49.41
CDY29571 Canola plasma membrane 45.78 49.21
CDX72644 Canola plasma membrane 45.69 49.11
CDY44033 Canola plasma membrane 45.78 48.97
CDY49443 Canola plasma membrane 45.32 48.72
CDY14779 Canola plasma membrane 44.31 48.64
CDX76883 Canola plasma membrane 45.23 48.62
CDX67686 Canola cytosol, peroxisome, plasma membrane, plastid 45.32 48.2
CDY11764 Canola plasma membrane 44.86 48.08
CDX90109 Canola plasma membrane 44.86 48.08
CDY33829 Canola plasma membrane 45.14 48.0
CDY06915 Canola plasma membrane 45.41 47.97
CDY06114 Canola plasma membrane 44.95 47.8
CDX72049 Canola plasma membrane 44.95 47.8
CDX89375 Canola plasma membrane 44.04 46.56
CDX94386 Canola cytosol 44.5 46.1
CDX94389 Canola plasma membrane 43.3 46.05
CDY38720 Canola plasma membrane 37.16 42.5
CDY38719 Canola plasma membrane 35.69 40.69
CDY53835 Canola nucleus, plasma membrane, plastid 8.81 31.17
CDY06279 Canola plasma membrane 10.09 29.33
CDX94924 Canola plasma membrane 21.19 27.86
CDY09907 Canola plasma membrane 25.96 27.8
CDY06268 Canola plasma membrane 25.96 27.75
CDY22720 Canola peroxisome, plasma membrane 25.6 27.71
CDY22604 Canola plasma membrane 25.05 27.35
CDY07153 Canola plasma membrane 25.96 26.85
CDY51719 Canola plasma membrane 25.96 26.85
CDY28053 Canola plasma membrane 26.79 26.84
CDX95122 Canola cytosol, plasma membrane, vacuole 7.52 26.8
CDY35928 Canola plasma membrane 25.05 26.2
CDY68458 Canola cytosol, peroxisome, plasma membrane 15.5 25.38
CDY61305 Canola cytosol 11.19 25.05
CDY70305 Canola plasma membrane 5.23 23.17
CDX93457 Canola cytosol, nucleus, plasma membrane 23.39 21.16
CDX95120 Canola mitochondrion 0.28 2.08
Protein Annotations
Gene3D:1.20.1110.10Gene3D:1.20.5.170Gene3D:2.70.150.10MapMan:24.1.2.2.2Gene3D:3.40.1110.10Gene3D:3.40.50.1000
GO:A0A078H4J5UniProt:A0A078H4J5InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cation-transptr_CInterPro:ATPase_P-typ_cation-transptr_N
InterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sfEnsemblPlants:CDY32412ProteinID:CDY32412ProteinID:CDY32412.1InterPro:Ca_ATPase_N_dom
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005388GO:GO:0005488
GO:GO:0005515GO:GO:0005516GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0006811
GO:GO:0006816GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0070588
GO:GO:0099132EnsemblPlantsGene:GSBRNA2T00052005001InterPro:HAD-like_sfInterPro:HAD_sfInterPro:IPR023214InterPro:IPR023299
InterPro:P-type_ATPase_IIBPFAM:PF00122PFAM:PF00689PFAM:PF00690PFAM:PF00702PFAM:PF12515
PRINTS:PR00119PRINTS:PR00121ScanProsite:PS00154PANTHER:PTHR24093PANTHER:PTHR24093:SF416InterPro:P_typ_ATPase
SMART:SM00831SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81660SUPFAM:SSF81665TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01517TMHMM:TMhelixUniParc:UPI0004EEDF8CSEG:seg::
Description
BnaC03g41960DCalcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A078H4J5]
Coordinates
chrLK032294:+:214210..220295
Molecular Weight (calculated)
118745.0 Da
IEP (calculated)
6.297
GRAVY (calculated)
0.068
Length
1090 amino acids
Sequence
(BLAST)
0001: MSTTSSNGLL LTSMSGRHDD MEAGSARTDH SDHEELEHDP DDPFDLDNTK NASAASLRRW RQAALVLNAS RRFRYTLDLN KEEHYENRRR MIRAHAQVIR
0101: AALLFKLAGE QQIGAFGSSS STTPATSAGN FDIDLEKLVS MTRNQNMSNL QQLGGVKGVA EKLKSNLEQG IEEDEKEVTD RKNAFGSNTY PKKKGKSFYM
0201: FLWEAWQDLT LIILIIAAVT SLALGIKTEG LKEGWLDGGS IAFAVLLVIM VTAVSDYRQS LQFQNLNDEK RNIQLEVMRG GRTVKISIYD VVVGDVIPLR
0301: IGDQVPADGV LISGHSLAID ESSMTGESKI VNKDQKSPFL MSGCKVADGV GSMLVTGVGI NTEWGLLMAS ISEDTGEETP LQVRLNGLAT FIGIVGLTVA
0401: LVVLVALLVR YFTGTSQDSN GATQFIKGTT SISDIVDDCV KIFTIAVTIV VVAVPEGLPL AVTLTLAYSM RKMMADKALV RRLSACETMG SATTICSDKT
0501: GTLTLNQMTV VETYAGGSKM DVADNPSGLH PKLVALISEG VAQNTTGNIF HPKDGGEVEI SGSPTEKAIL SWAYKLGMKF DTIRSESAII HAFPFNSEKK
0601: RGGVAVLRGD SEVFIHWKGA AEIVLACCTQ FMDSSGTLQP IDNQKEFFRL AIDAMAKNSL RCVAIACRTQ ELNKVPKEQE DLDKWDLPED ELTLLAIVGI
0701: KDPCRPGVRE AVRICTSAGV KVRMVTGDNL QTAKAIALEC GILSSDTEAV EPTIIEGKVF RELSEKEREQ VAKRITVMGR SSPNDKLLLV QALRKNGDVV
0801: AVTGDGTNDA PALHEADIGL SMGISGTEVA KESSDIIILD DNFASVVKVV RWGRSVYANI QKFIQFQLTV NVAALIINVV AAMSSGDVPL KAVQLLWVNL
0901: IMDTLGALAL ATEPPTDHLM HRTPVGRREP LITNIMWRNL LVQSLYQVAV LLVLNFAGLS VLGLKQDSDH AHAVEVKNTM IFNAFVMCQI FNEFNARKPD
1001: EMNVFSGVTK NPLFIAIVGV TFVLQILIVT FLGEFAHTVP LSWQLWLASI VIGLVSWPLA VVGKLIPVPK TPMSIYFKKP FRKYKASRSA
Best Arabidopsis Sequence Match ( AT3G21180.1 )
(BLAST)
0001: MSTSSSNGLL LTSMSGRHDD MEAGSAKTEE HSDHEELQHD PDDPFDIDNT KNASVESLRR WRQAALVLNA SRRFRYTLDL NKEEHYDNRR RMIRAHAQVI
0101: RAALLFKLAG EQQIAFGSST PAASTGNFDI DLEKLVSMTR NQNMSNLQQY GGVKGVAEKL KSNMEQGINE DEKEVIDRKN AFGSNTYPKK KGKNFFMFLW
0201: EAWQDLTLII LIIAAVTSLA LGIKTEGLKE GWLDGGSIAF AVLLVIVVTA VSDYRQSLQF QNLNDEKRNI QLEVMRGGRT VKISIYDVVV GDVIPLRIGD
0301: QVPADGVLIS GHSLAIDESS MTGESKIVHK DQKSPFLMSG CKVADGVGNM LVTGVGINTE WGLLMASISE DTGEETPLQV RLNGLATFIG IVGLSVALVV
0401: LVALLVRYFT GTTQDTNGAT QFIKGTTSIS DIVDDCVKIF TIAVTIVVVA VPEGLPLAVT LTLAYSMRKM MADKALVRRL SACETMGSAT TICSDKTGTL
0501: TLNQMTVVET YAGGSKMDVA DNPSGLHPKL VALISEGVAQ NTTGNIFHPK DGGEVEISGS PTEKAILSWA YKLGMKFDTI RSESAIIHAF PFNSEKKRGG
0601: VAVLRGDSEV FIHWKGAAEI VLACCTQYMD SNGTLQSIES QKEFFRVAID SMAKNSLRCV AIACRTQELN QVPKEQEDLD KWALPEDELI LLAIVGIKDP
0701: CRPGVREAVR ICTSAGVKVR MVTGDNLQTA KAIALECGIL SSDTEAVEPT IIEGKVFREL SEKEREQVAK KITVMGRSSP NDKLLLVQAL RKNGDVVAVT
0801: GDGTNDAPAL HEADIGLSMG ISGTEVAKES SDIIILDDNF ASVVKVVRWG RSVYANIQKF IQFQLTVNVA ALIINVVAAM SSGDVPLKAV QLLWVNLIMD
0901: TLGALALATE PPTDHLMHRT PVGRREPLIT NIMWRNLLVQ SFYQVAVLLV LNFAGLSILG LNHENHAHAV EVKNTMIFNA FVMCQIFNEF NARKPDEMNV
1001: FRGVNKNPLF VAIVGVTFIL QIIIVTFLGK FAHTVRLGWQ LWLASIIIGL VSWPLAIVGK LIPVPKTPMS VYFKKPFRKY KASRNA
Arabidopsis Description
ACA9Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178VER8]
SUBAcon: [plasma membrane,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.