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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX94389 Canola plasma membrane 95.15 95.71
CDY65296 Canola cytosol 6.11 95.45
CDY65295 Canola cytosol 23.96 93.21
CDX89371 Canola plasma membrane 27.06 83.04
CDX94386 Canola cytosol 77.5 75.95
CDY19574 Canola plasma membrane 28.03 48.01
CDX68595 Canola plasma membrane 48.4 47.16
CDY43534 Canola cytosol 47.91 46.6
CDY30184 Canola plasma membrane 47.91 46.52
CDY46716 Canola cytosol 48.21 46.32
CDY20693 Canola cytosol 48.01 46.26
CDY38264 Canola plasma membrane 47.91 46.04
CDY38720 Canola plasma membrane 42.39 45.86
CDY37311 Canola plasma membrane 46.94 44.36
CDY38719 Canola plasma membrane 41.13 44.35
CDY27537 Canola plasma membrane 46.75 44.14
CDX82212 Canola plasma membrane 46.56 44.04
CDY32412 Canola plasma membrane 46.56 44.04
CDY32902 Canola plasma membrane 47.91 44.03
CDY50072 Canola plasma membrane 46.75 44.02
CDY19575 Canola plasma membrane 46.65 43.93
CDY53981 Canola cytosol 47.91 42.66
CDY40822 Canola plasma membrane 38.6 39.17
CDY34219 Canola plasma membrane 38.51 39.04
CDY10680 Canola plasma membrane 38.02 38.66
CDY10319 Canola plasma membrane 37.83 38.05
CDY49443 Canola plasma membrane 37.25 37.87
CDX72644 Canola plasma membrane 37.05 37.67
CDX76883 Canola plasma membrane 37.05 37.67
CDY22420 Canola plasma membrane 36.95 37.5
CDY44033 Canola plasma membrane 37.05 37.49
CDY29571 Canola plasma membrane 36.86 37.48
CDY14779 Canola plasma membrane 35.98 37.36
CDX93910 Canola plasma membrane 37.34 37.27
CDX90109 Canola plasma membrane 36.57 37.07
CDY11764 Canola plasma membrane 36.57 37.07
CDY06915 Canola plasma membrane 36.37 36.34
CDY06114 Canola plasma membrane 35.79 36.0
CDX72049 Canola plasma membrane 35.69 35.9
CDX67686 Canola cytosol, peroxisome, plasma membrane, plastid 35.6 35.8
CDY33829 Canola plasma membrane 35.6 35.8
CDY53835 Canola nucleus, plasma membrane, plastid 8.15 27.27
CDX94924 Canola plasma membrane 19.01 23.64
CDY22604 Canola plasma membrane 22.31 23.05
CDY06279 Canola plasma membrane 8.15 22.4
CDY06268 Canola plasma membrane 21.53 21.76
CDY07153 Canola plasma membrane 22.11 21.63
CDY51719 Canola plasma membrane 22.02 21.54
CDY09907 Canola plasma membrane 21.24 21.51
CDY22720 Canola peroxisome, plasma membrane 20.76 21.25
CDY28053 Canola plasma membrane 21.63 20.5
CDX95122 Canola cytosol, plasma membrane, vacuole 6.01 20.26
CDY35928 Canola plasma membrane 20.37 20.15
CDY68458 Canola cytosol, peroxisome, plasma membrane 13.0 20.12
CDY61305 Canola cytosol 9.02 19.1
CDY70305 Canola plasma membrane 4.46 18.7
CDX93457 Canola cytosol, nucleus, plasma membrane 21.14 18.09
CDX95120 Canola mitochondrion 0.0 0.0
Protein Annotations
Gene3D:1.20.1110.10Gene3D:2.70.150.10MapMan:24.1.2.2.2Gene3D:3.40.1110.10Gene3D:3.40.50.1000GO:A0A078DJJ7
InterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cation-transptr_CInterPro:ATPase_P-typ_cation-transptr_NInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sfEnsemblPlants:CDX89375
ProteinID:CDX89375ProteinID:CDX89375.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215
GO:GO:0005388GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0070588EnsemblPlantsGene:GSBRNA2T00149606001InterPro:HAD-like_sf
InterPro:HAD_sfInterPro:IPR023214InterPro:IPR023299InterPro:P-type_ATPase_IIBPFAM:PF00122PFAM:PF00689
PFAM:PF00690PFAM:PF00702PFAM:PF13246PRINTS:PR00119PRINTS:PR00120PANTHER:PTHR24093
PANTHER:PTHR24093:SF368InterPro:P_typ_ATPaseSMART:SM00831SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81660
SUPFAM:SSF81665TIGRFAMs:TIGR01494TIGRFAMs:TIGR01517TMHMM:TMhelixUniParc:UPI0004EE75E7SEG:seg
Description
BnaA01g15180D
Coordinates
chrLK031858:-:1201853..1209341
Molecular Weight (calculated)
114241.0 Da
IEP (calculated)
6.552
GRAVY (calculated)
0.124
Length
1031 amino acids
Sequence
(BLAST)
0001: MKSPQRSSDD MEAGGDVPKS RNHSRRRGRG IFVAVDASIR FKSAMGCEKE IELGSHDQPT ATDVALSQSE EQPVQVEIEL PASYQDEFGI RLEELVSISR
0101: DGGLSVLKRF DGVSGLSPLL HTDLDKGICG SHEDIRRRRN TFGSNEYPLK KERNFWMFLW EASRSFTLIV LVLAALASLL LQIKTKTISH GWYDEAGIIV
0201: AVILVIFVTA ISNYNQSLQF EKLNDEKRNI CIEVTRNGRL VEVPIYDVPA DGVLVSGYSL QIAEYESMGT NRTVHKDTDI DPILISGSKV EDGIGRMLVT
0301: SVGMNTQWRM PACIPLYTGQ ETPLQVGLNR VVTAFGLISI SVALVVFLIE SCLCFMGRTK NTDGSPMFDA GKTTSDEKID MVIKFIILGV TIVVVAVPEG
0401: LPLAVTLNIA YMTRKLLGEK VLVQKLSACE AMGSATMIVC HKTGILTLNQ AICYLSSFFH SILNNSFSFE QMEVVDVCAG RVRTHNLDTI AAELSPLLIS
0501: WITEGIALNT NGSVYHPEGQ SEPEVFGSAT ERAILNFGVK LGMNFDEIKS KSTIFSVSPF NSRRKRRGVA VQLHDSQVRV HWKGAAKTIL ASCQWYMDKD
0601: NIAAMDQERI FHFEKIIDEM SKEGLRCAAL AYRTFTDEAF PDIPESNLVL LAIIGIKDSC RPGISQAIQQ CRNAGVKVCM VTGDDLLTAK AIAMQCGILR
0701: GTLDEPANTA ILASEFASMS EADREEIAEN IVVMGRSSPD ENLLLLEALR KKGHVVAATG KGIRDAPSLR QANISLAMGI GGTAIVKECS DIIILEDNFT
0801: SIVKVIQWGR FLYTNAQRFL QFRLTVNASA LIICVVVAVH SHEIPLNVAQ LLWINLLNDT FGAWALASEP PMDNLMRRPP VRKGEPFITN LMWAKFVAQV
0901: SFQVSALLYL NFHGESILKL ENKSLDQANK VKNTVIFNCF VFCQVFNEVE CRTSYQGNTF SGILKNHLFL GTILVNVILQ IIVIECLGIF FYTARLNLKQ
1001: WLISIGIGFF SQVIGRFPFQ AFPYLRNEDH I
Best Arabidopsis Sequence Match ( AT4G29900.1 )
(BLAST)
0001: MSGQFNNSPR GEDKDVEAGT SSFTEYEDSP FDIASTKNAP VERLRRWRQA ALVLNASRRF RYTLDLKREE DKKQMLRKMR AHAQAIRAAH LFKAAASRVT
0101: GIASPLPTPG GGDFGIGQEQ IVSISRDQNI GALQELGGVR GLSDLLKTNL EKGIHGDDDD ILKRKSAFGS NTYPQKKGRS FWRFVWEASQ DLTLIILIVA
0201: AVASLALGIK TEGIEKGWYD GISIAFAVLL VIVVTATSDY RQSLQFQNLN EEKRNIRLEV TRDGRRVEIS IYDIVVGDVI PLNIGDQVPA DGVLVAGHSL
0301: AVDESSMTGE SKIVQKNSTK HPFLMSGCKV ADGNGTMLVT GVGVNTEWGL LMASVSEDNG GETPLQVRLN GVATFIGIVG LTVAGVVLFV LVVRYFTGHT
0401: KNEQGGPQFI GGKTKFEHVL DDLVEIFTVA VTIVVVAVPE GLPLAVTLTL AYSMRKMMAD KALVRRLSAC ETMGSATTIC SDKTGTLTLN EMTVVECYAG
0501: LQKMDSPDSS SKLPSAFTSI LVEGIAHNTT GSVFRSESGE IQVSGSPTER AILNWAIKLG MDFDALKSES SAVQFFPFNS EKKRGGVAVK SPDSSVHIHW
0601: KGAAEIVLGS CTHYMDESES FVDMSEDKMG GLKDAIDDMA ARSLRCVAIA FRTFEADKIP TDEEQLSRWE LPEDDLILLA IVGIKDPCRP GVKNSVLLCQ
0701: QAGVKVRMVT GDNIQTAKAI ALECGILASD SDASEPNLIE GKVFRSYSEE ERDRICEEIS VMGRSSPNDK LLLVQSLKRR GHVVAVTGDG TNDAPALHEA
0801: DIGLAMGIQG TEVAKEKSDI IILDDNFESV VKVVRWGRSV YANIQKFIQF QLTVNVAALV INVVAAISAG EVPLTAVQLL WVNLIMDTLG ALALATEPPT
0901: DHLMDRAPVG RREPLITNIM WRNLFIQAMY QVTVLLILNF RGISILHLKS KPNAERVKNT VIFNAFVICQ VFNEFNARKP DEINIFRGVL RNHLFVGIIS
1001: ITIVLQVVIV EFLGTFASTT KLDWEMWLVC IGIGSISWPL AVIGKLIPVP ETPVSQYFRI NRWRRNSSG
Arabidopsis Description
ACA10Calcium-transporting ATPase 10, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9SZR1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.