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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY38719 Canola plasma membrane 72.72 72.49
AT5G53010.1 Thale cress plasma membrane 63.27 57.48
CDY65296 Canola cytosol 3.67 53.03
CDX89371 Canola plasma membrane 17.73 50.3
CDY65295 Canola cytosol 13.54 48.68
CDX94389 Canola plasma membrane 46.27 43.02
CDY19574 Canola plasma membrane 26.97 42.69
CDX94386 Canola cytosol 46.8 42.4
CDX89375 Canola plasma membrane 45.86 42.39
CDY20693 Canola cytosol 44.07 39.25
CDY46716 Canola cytosol 43.97 39.05
CDY30184 Canola plasma membrane 43.13 38.7
CDX68595 Canola plasma membrane 42.92 38.66
CDY43534 Canola cytosol 42.92 38.58
CDY38264 Canola plasma membrane 43.44 38.58
CDY37311 Canola plasma membrane 42.92 37.49
CDY19575 Canola plasma membrane 43.02 37.44
CDY50072 Canola plasma membrane 42.92 37.35
CDY27537 Canola plasma membrane 42.71 37.27
CDY32902 Canola plasma membrane 43.76 37.17
CDY32412 Canola plasma membrane 42.5 37.16
CDX82212 Canola plasma membrane 42.5 37.16
CDY53981 Canola cytosol 43.34 35.66
CDY40822 Canola plasma membrane 37.46 35.14
CDY10680 Canola plasma membrane 37.25 35.01
CDY34219 Canola plasma membrane 37.25 34.91
CDY10319 Canola plasma membrane 37.04 34.44
CDX93910 Canola plasma membrane 35.36 32.62
CDY29571 Canola plasma membrane 34.0 31.95
CDY14779 Canola plasma membrane 33.26 31.92
CDY22420 Canola plasma membrane 34.0 31.89
CDX72644 Canola plasma membrane 33.89 31.85
CDY49443 Canola plasma membrane 33.89 31.85
CDY44033 Canola plasma membrane 33.89 31.7
CDX76883 Canola plasma membrane 33.68 31.66
CDX67686 Canola cytosol, peroxisome, plasma membrane, plastid 33.16 30.83
CDY33829 Canola plasma membrane 33.05 30.73
CDY06114 Canola plasma membrane 32.95 30.63
CDY06915 Canola plasma membrane 33.16 30.62
CDY11764 Canola plasma membrane 32.53 30.48
CDX90109 Canola plasma membrane 32.53 30.48
CDX72049 Canola plasma membrane 32.63 30.34
CDY53835 Canola nucleus, plasma membrane, plastid 7.97 24.68
CDY06279 Canola plasma membrane 8.39 21.33
CDY06268 Canola plasma membrane 22.46 20.98
CDY07153 Canola plasma membrane 23.19 20.97
CDY51719 Canola plasma membrane 23.09 20.87
CDX94924 Canola plasma membrane 18.15 20.87
CDY09907 Canola plasma membrane 22.25 20.83
CDY22604 Canola plasma membrane 21.51 20.54
CDY22720 Canola peroxisome, plasma membrane 21.51 20.36
CDY28053 Canola plasma membrane 22.88 20.04
CDY68458 Canola cytosol, peroxisome, plasma membrane 13.96 19.97
CDY35928 Canola plasma membrane 21.83 19.96
CDY61305 Canola cytosol 10.07 19.71
CDX95122 Canola cytosol, plasma membrane, vacuole 5.98 18.63
CDX93457 Canola cytosol, nucleus, plasma membrane 20.99 16.6
CDY70305 Canola plasma membrane 3.78 14.63
CDX95120 Canola mitochondrion 0.1 0.69
Protein Annotations
Gene3D:1.20.1110.10Gene3D:2.70.150.10MapMan:24.1.2.2.2Gene3D:3.40.1110.10Gene3D:3.40.50.1000GO:A0A078HJN9
UniProt:A0A078HJN9InterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cation-transptr_CInterPro:ATPase_P-typ_cation-transptr_NInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sf
EnsemblPlants:CDY38720ProteinID:CDY38720ProteinID:CDY38720.1ncoils:CoilGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005215GO:GO:0005388GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0006811GO:GO:0006816GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0070588GO:GO:0099132EnsemblPlantsGene:GSBRNA2T00066498001InterPro:HAD-like_sfInterPro:HAD_sf
InterPro:IPR023214InterPro:IPR023299InterPro:P-type_ATPase_IIBPFAM:PF00122PFAM:PF00689PFAM:PF00690
PFAM:PF13246PRINTS:PR00119PRINTS:PR00120PANTHER:PTHR24093PANTHER:PTHR24093:SF368InterPro:P_typ_ATPase
SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81660SUPFAM:SSF81665TIGRFAMs:TIGR01517TMHMM:TMhelix
UniParc:UPI0004EE18AESEG:seg::::
Description
BnaC03g15290DCalcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A078HJN9]
Coordinates
chrLK032431:-:55843..64123
Molecular Weight (calculated)
105822.0 Da
IEP (calculated)
7.064
GRAVY (calculated)
0.160
Length
953 amino acids
Sequence
(BLAST)
001: MNHPVRFQNP SVDENLFLWF IRATLTSGGF GIKLDKLLQA VGARDLQALN HYNGVEGLST LLKTDLERGI DDEIQQRKQA FGSNTYPSKK GHTFWSFIWK
101: ATLFPPYMAI LLATVLNLLL RIKGKAIHGS WYVEACTILA IVPYIIVTAS TEYMQSRQSE KISEEKRNVA LDVIRGGRRF TVSSSDIVVG DIVPLKNGFQ
201: VPADGILFVA NSLKIDEQEL TGSHLIVQKD ILKDPFLLSG SKVIEGIGTM LVTSVGINTE WGKKMEKQHE TDEEKPFQVY LKWLAISASL LVILLASVAC
301: IVQLCRYFFG RTKKSDGTPL YMPGNTSFDE AMDFVIKSLS FGIATILVTV PVGLYVAVLL NLAYTTGEMI TDKALVQNLY ACERMGYVTT ILCHKTGILT
401: KNKASMSVVD VWAGGIRMQD MGDVSQLPSI LKELIIEGIA RNTNGSVVFE TGVTEPEVYG SPTEQAILSW GNKLGMKFDE ARSGSPVLHV IPFNPKKKYG
501: GVALQIGTRN HVHWKGSAKV ILNSCKWYMD KDNKRIAIDE QKQEMERIIK DMSMRGMRCA ALAYQSYELG TLPTTDEELS TLPQDLVLLA IIGIQDPCRS
601: DTKNAVKLCN SGGVKVRMVT EDDVSTAQAI ATDCGILENS DDPDVITTGA QFRVLSDLDR EEKAPKILVL AQAFPKDSLL FVEALRRSGH VVAATGMGIH
701: DTMTLRAAHV SLAMGVGGTA VAKENSDIII LDDNFDTIVK VIRWCRYLYT NIQRYVIFRV TVSVLAVAIC VIEVVFYDAF PLNAVQLLLL NLIADIFGAL
801: ALAYGPSARK LMGKPPVGES DPLITKTMWF KMVIQVIYLV QLALIHSDSV LKLDHGHTGD AEKVKNTFIF NSLVFCLVFN EFEIRSGEQT LTEVLEDNMF
901: IFTIMATIIV QIISVEFFGI RLDMKKWIIS ILEGFISQVA TRFPLKVYPY RRN
Best Arabidopsis Sequence Match ( AT5G53010.1 )
(BLAST)
0001: MVVFNLSMFR FWKRPSPNVG PGDLEIGLGG GYSSSLADDD VVIPHPPVAE DVPSELEAGI DPEAALENIA PHDLEAGHVT THRWRRVRTL KRASVAFYQV
0101: VICQMLRRNR TGTVPDQALV HDDHQETEQS SNEASTSGGF GIGVEELVQL VKERSLEALN RYNGVHGLSN LLKTDLKVGI DRRDDEILLR RNAYGSNTYP
0201: CKKGKTFWYF LWRASQFSHL LVIMFAAVFF SLLRIKTKGI LDGWYIEACI VLVTVFHIIA IAVAEYKQSC RFIKLTEEKR TVYLEVIRGG RRVRVSIYDI
0301: VVGDIVPLKN GCQVPADGVL FVANSLKVAE QEVTASDEIV QKDLQTNPFL LSGSKLIEGI GTMLVTSVGM NTEWGLKMEV SQKTDEEKPF QGYLKWLAIS
0401: ASWFVVLFAS VACSIQVGGS SAPSWQGPNN RFISRYFSGV TKKSDGTPMF IYGITTADEA IEFVITSLSF GIATIVVAVP VGLSIAVRLN FAKTTKKMRK
0501: DKVLMSVVDV WAGGIRMQDM DDVSQLPTFL KELIIEGIAQ NTNGSVVFET GVTEPEVYGS PTEQAILNFG NKLGMKFDDA RSASLVRHTI PFNPKKKYGG
0601: VALQLGTHAH VHWKGSAKTI LSSCEGYMDG ANNSRAINEQ KRKSFEGTIE NMSKEGLRCA ALAYQPCELG SLPTITEPRN LVLLAIVGIK DPCRPGTRDA
0701: IQLCNSGSVK VCMVTDNDGL TAQAIAIECG ILTDASGRNI RTGAQFRELS DLEREQIAGD ILVFAQSSPN DNLLLVQALK KRGHIVAATG MGIHDPKTLR
0801: EADVSLAMGV GGTAAAKENS DFIILDDNFA TIVKCIIWSR SLYNNVQKSI LFRLTVSVSA LAVCVVEVVV YDAFPLNAVQ FLLVNLIIDI LGALALAYRP
0901: RSDHHLMGKP PVGIRDPLIT KTMWSKMIIQ VFYLVLSLVL INSEKLLKLK HGQTGNAEKM MNTLIFNSFV FYLVFNEFEI QSVDQTFKEV LRENMFLVTI
1001: TSTIISQIIV IKFAGIFIDL KKWVTTSLLG LLSQVATRYP YPAIQYHRN
Arabidopsis Description
Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F4KHQ2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.