Skip to main content
crop-pal logo
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • mitochondrion 3
  • peroxisome 1
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY38719 Canola plasma membrane 61.49 67.47
CDY38720 Canola plasma membrane 57.48 63.27
Bra013942.1-P Field mustard cytosol 16.87 48.63
AT4G29900.1 Thale cress plasma membrane 41.18 40.41
AT5G57110.2 Thale cress plasma membrane 41.18 40.22
AT3G21180.1 Thale cress cytosol, plasma membrane, plastid 40.61 39.23
AT3G22910.1 Thale cress plasma membrane 33.46 34.51
AT2G22950.1 Thale cress cytosol, peroxisome, plasma membrane 31.36 32.41
AT4G37640.1 Thale cress plasma membrane 31.08 32.15
AT1G27770.1 Thale cress plasma membrane 31.17 32.06
AT2G41560.1 Thale cress plasma membrane 30.98 31.55
AT3G57330.1 Thale cress cytosol, peroxisome, plasma membrane, plastid 30.6 31.32
AT3G63380.1 Thale cress plasma membrane 30.41 30.88
AT4G00900.1 Thale cress plasma membrane 20.69 20.59
AT1G07670.2 Thale cress plasma membrane 20.59 20.36
AT1G07810.1 Thale cress plasma membrane 20.21 19.98
AT1G10130.1 Thale cress plasma membrane 18.3 19.24
Protein Annotations
Gene3D:1.20.1110.10Gene3D:2.70.150.10MapMan:24.1.2.2.2Gene3D:3.40.1110.10Gene3D:3.40.50.1000EntrezGene:835380
ProteinID:AED96289.1ArrayExpress:AT5G53010EnsemblPlantsGene:AT5G53010RefSeq:AT5G53010TAIR:AT5G53010RefSeq:AT5G53010-TAIR-G
EnsemblPlants:AT5G53010.1TAIR:AT5G53010.1InterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cation-transptr_CInterPro:ATPase_P-typ_cation-transptr_NInterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sfUnigene:At.29580UniProt:F4KHQ2GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005388GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810
GO:GO:0006811GO:GO:0006816GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0070588GO:GO:0099132InterPro:HAD-like_sfInterPro:HAD_sfInterPro:IPR023214InterPro:IPR023299
RefSeq:NP_200113.3PFAM:PF00122PFAM:PF00689PFAM:PF00690PFAM:PF13246PO:PO:0000293
PO:PO:0020094PRINTS:PR00119PRINTS:PR00120PANTHER:PTHR42861PANTHER:PTHR42861:SF4InterPro:P_typ_ATPase
SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81660SUPFAM:SSF81665TIGRFAMs:TIGR01494TMHMM:TMhelix
UniParc:UPI000034F2F8SEG:seg::::
Description
Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F4KHQ2]
Coordinates
chr5:-:21488490..21496537
Molecular Weight (calculated)
115808.0 Da
IEP (calculated)
7.941
GRAVY (calculated)
0.096
Length
1049 amino acids
Sequence
(BLAST)
0001: MVVFNLSMFR FWKRPSPNVG PGDLEIGLGG GYSSSLADDD VVIPHPPVAE DVPSELEAGI DPEAALENIA PHDLEAGHVT THRWRRVRTL KRASVAFYQV
0101: VICQMLRRNR TGTVPDQALV HDDHQETEQS SNEASTSGGF GIGVEELVQL VKERSLEALN RYNGVHGLSN LLKTDLKVGI DRRDDEILLR RNAYGSNTYP
0201: CKKGKTFWYF LWRASQFSHL LVIMFAAVFF SLLRIKTKGI LDGWYIEACI VLVTVFHIIA IAVAEYKQSC RFIKLTEEKR TVYLEVIRGG RRVRVSIYDI
0301: VVGDIVPLKN GCQVPADGVL FVANSLKVAE QEVTASDEIV QKDLQTNPFL LSGSKLIEGI GTMLVTSVGM NTEWGLKMEV SQKTDEEKPF QGYLKWLAIS
0401: ASWFVVLFAS VACSIQVGGS SAPSWQGPNN RFISRYFSGV TKKSDGTPMF IYGITTADEA IEFVITSLSF GIATIVVAVP VGLSIAVRLN FAKTTKKMRK
0501: DKVLMSVVDV WAGGIRMQDM DDVSQLPTFL KELIIEGIAQ NTNGSVVFET GVTEPEVYGS PTEQAILNFG NKLGMKFDDA RSASLVRHTI PFNPKKKYGG
0601: VALQLGTHAH VHWKGSAKTI LSSCEGYMDG ANNSRAINEQ KRKSFEGTIE NMSKEGLRCA ALAYQPCELG SLPTITEPRN LVLLAIVGIK DPCRPGTRDA
0701: IQLCNSGSVK VCMVTDNDGL TAQAIAIECG ILTDASGRNI RTGAQFRELS DLEREQIAGD ILVFAQSSPN DNLLLVQALK KRGHIVAATG MGIHDPKTLR
0801: EADVSLAMGV GGTAAAKENS DFIILDDNFA TIVKCIIWSR SLYNNVQKSI LFRLTVSVSA LAVCVVEVVV YDAFPLNAVQ FLLVNLIIDI LGALALAYRP
0901: RSDHHLMGKP PVGIRDPLIT KTMWSKMIIQ VFYLVLSLVL INSEKLLKLK HGQTGNAEKM MNTLIFNSFV FYLVFNEFEI QSVDQTFKEV LRENMFLVTI
1001: TSTIISQIIV IKFAGIFIDL KKWVTTSLLG LLSQVATRYP YPAIQYHRN
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.