Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70305 | Canola | plasma membrane | 23.75 | 96.34 |
| CDY22604 | Canola | plasma membrane | 95.79 | 95.79 |
| CDX94924 | Canola | plasma membrane | 79.46 | 95.66 |
| Bra031701.1-P | Field mustard | plasma membrane | 93.79 | 86.27 |
| CDY53835 | Canola | nucleus, plasma membrane, plastid | 26.05 | 84.42 |
| KRH61432 | Soybean | plasma membrane | 84.47 | 84.22 |
| VIT_18s0001g08850.t01 | Wine grape | plasma membrane | 78.06 | 84.03 |
| Solyc07g022790.2.1 | Tomato | plasma membrane | 33.27 | 83.84 |
| Bra019960.1-P | Field mustard | plasma membrane | 85.27 | 81.44 |
| GSMUA_Achr6P23080_001 | Banana | plasma membrane | 79.76 | 80.81 |
| Solyc07g022780.2.1 | Tomato | mitochondrion | 29.46 | 80.33 |
| KXG37640 | Sorghum | plasma membrane | 80.46 | 80.3 |
| Zm00001d033886_P001 | Maize | mitochondrion | 77.66 | 80.23 |
| HORVU4Hr1G010200.3 | Barley | plasma membrane | 80.16 | 80.0 |
| TraesCS4A01G253500.1 | Wheat | peroxisome | 80.16 | 80.0 |
| TraesCS4D01G060900.1 | Wheat | plasma membrane | 80.16 | 80.0 |
| TraesCS4B01G061900.1 | Wheat | plasma membrane | 79.96 | 79.8 |
| Os03t0730800-01 | Rice | plasma membrane | 50.5 | 78.75 |
| CDX93457 | Canola | cytosol, nucleus, plasma membrane | 84.27 | 69.79 |
| AT4G00900.1 | Thale cress | plasma membrane | 48.5 | 45.92 |
| AT1G07810.1 | Thale cress | plasma membrane | 48.7 | 45.81 |
| AT1G07670.2 | Thale cress | plasma membrane | 48.6 | 45.71 |
| AT4G37640.1 | Thale cress | plasma membrane | 27.45 | 27.02 |
| AT2G22950.1 | Thale cress | cytosol, peroxisome, plasma membrane | 27.45 | 27.0 |
| AT3G63380.1 | Thale cress | plasma membrane | 27.66 | 26.72 |
| AT3G22910.1 | Thale cress | plasma membrane | 26.75 | 26.25 |
| AT3G57330.1 | Thale cress | cytosol, peroxisome, plasma membrane, plastid | 26.45 | 25.76 |
| AT1G27770.1 | Thale cress | plasma membrane | 26.25 | 25.69 |
| AT2G41560.1 | Thale cress | plasma membrane | 26.35 | 25.53 |
| AT5G57110.2 | Thale cress | plasma membrane | 27.45 | 25.51 |
| AT4G29900.1 | Thale cress | plasma membrane | 27.05 | 25.26 |
| AT3G21180.1 | Thale cress | cytosol, plasma membrane, plastid | 26.25 | 24.13 |
| AT5G53010.1 | Thale cress | plasma membrane | 19.24 | 18.3 |
Protein Annotations
| Gene3D:1.20.1110.10 | Gene3D:2.70.150.10 | MapMan:24.1.2.2.1 | Gene3D:3.40.1110.10 | Gene3D:3.40.50.1000 | EntrezGene:837550 |
| ProteinID:AAC34328.2 | ProteinID:AAD32863.1 | ProteinID:AEE28545.1 | EMBL:AF117296 | EMBL:AJ132388 | EMBL:AK229199 |
| ArrayExpress:AT1G10130 | EnsemblPlantsGene:AT1G10130 | RefSeq:AT1G10130 | TAIR:AT1G10130 | RefSeq:AT1G10130-TAIR-G | EnsemblPlants:AT1G10130.1 |
| TAIR:AT1G10130.1 | InterPro:ATPase_P-typ_P_site | InterPro:ATPase_P-typ_TM_dom_sf | InterPro:ATPase_P-typ_cation-transptr_C | InterPro:ATPase_P-typ_cation-transptr_N | InterPro:ATPase_P-typ_cyto_dom_N |
| InterPro:ATPase_P-typ_transduc_dom_A_sf | EMBL:AY650902 | Unigene:At.24768 | ncoils:Coil | Symbol:ECA3 | EMBL:EU082212 |
| GO:GO:0000139 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005388 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005768 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0006810 | GO:GO:0006811 |
| GO:GO:0006816 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0010008 | GO:GO:0012505 | GO:GO:0015410 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0031902 | GO:GO:0033017 | GO:GO:0046872 |
| GO:GO:0048364 | GO:GO:0055071 | GO:GO:0070588 | GO:GO:0071421 | GO:GO:0099132 | InterPro:HAD-like_sf |
| InterPro:HAD_sf | InterPro:IPR023214 | InterPro:IPR023299 | RefSeq:NP_563860.1 | InterPro:P-type_ATPase_IIA | PFAM:PF00122 |
| PFAM:PF00689 | PFAM:PF00690 | PFAM:PF00702 | PFAM:PF13246 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0005052 | PO:PO:0005660 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009015 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00119 | PRINTS:PR00120 | ScanProsite:PS00154 | PANTHER:PTHR42861 |
| PANTHER:PTHR42861:SF6 | InterPro:P_typ_ATPase | UniProt:Q9SY55 | InterPro:SERCA3 | SMART:SM00831 | SUPFAM:SSF56784 |
| SUPFAM:SSF81653 | SUPFAM:SSF81660 | SUPFAM:SSF81665 | TIGRFAMs:TIGR01116 | TIGRFAMs:TIGR01494 | TMHMM:TMhelix |
| UniParc:UPI0000129B50 | SEG:seg | : | : | : | : |
Description
ECA3Calcium-transporting ATPase 3, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:Q9SY55]
Coordinates
chr1:+:3310930..3322269
Molecular Weight (calculated)
109067.0 Da
IEP (calculated)
5.991
GRAVY (calculated)
0.228
Length
998 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDAYARSVS EVLDFFGVDP TKGLSDSQVV HHSRLYGRNV LPEEKRTPFW KLVLKQFDDL LVKILIVAAI VSFVLALANG ETGLTAFLEP FVILLILAAN
101: AAVGVITETN AEKALEELRA YQANIATVLR NGCFSILPAT ELVPGDIVEV TVGCKIPADL RMIEMSSNTF RVDQAILTGE SCSVEKDVDC TLTTNAVYQD
201: KKNILFSGTD VVAGRGRAVV IGVGSNTAMG SIHDSMLQTD DEATPLKKKL DEFGSFLAKV IAGICVLVWV VNIGHFSDPS HGGFFKGAIH YFKIAVALAV
301: AAIPEGLPAV VTTCLALGTK KMARLNAIVR SLPSVETLGC TTVICSDKTG TLTTNMMSVS KICVVQSAEH GPMINEFTVS GTTYAPEGTV FDSNGMQLDL
401: PAQSPCLHHL AMCSSLCNDS ILQYNPDKDS YEKIGESTEV ALRVLAEKVG LPGFDSMPSA LNMLSKHERA SYCNHYWENQ FKKVYVLEFT RDRKMMSVLC
501: SHKQMDVMFS KGAPESIIAR CNKILCNGDG SVVPLTAAGR AELESRFYSF GDETLRCLAL AFKTVPHGQQ TISYDNENDL TFIGLVGMLD PPREEVRDAM
601: LACMTAGIRV IVVTGDNKST AESLCRKIGA FDNLVDFSGM SYTASEFERL PAVQQTLALR RMTLFSRVEP SHKRMLVEAL QKQNEVVAMT GDGVNDAPAL
701: KKADIGIAMG SGTAVAKSAS DMVLADDNFA SIVAAVAEGR AIYNNTKQFI RYMISSNIGE VVCIFVAAVL GIPDTLAPVQ LLWVNLVTDG LPATAIGFNK
801: QDSDVMKAKP RKVGEAVVTG WLFFRYLVIG VYVGLATVAG FIWWFVYSDG GPKLTYSELM NFETCALRET TYPCSIFEDR HPSTVAMTVL VVVEMFNALN
901: NLSENQSLLV ITPRSNLWLV GSIILTMLLH VLILYVHPLA VLFSVTPLSW AEWTAVLYLS FPVIIIDELL KFLSRNTGMR FRFRLRKADL LPKDRRDK
101: AAVGVITETN AEKALEELRA YQANIATVLR NGCFSILPAT ELVPGDIVEV TVGCKIPADL RMIEMSSNTF RVDQAILTGE SCSVEKDVDC TLTTNAVYQD
201: KKNILFSGTD VVAGRGRAVV IGVGSNTAMG SIHDSMLQTD DEATPLKKKL DEFGSFLAKV IAGICVLVWV VNIGHFSDPS HGGFFKGAIH YFKIAVALAV
301: AAIPEGLPAV VTTCLALGTK KMARLNAIVR SLPSVETLGC TTVICSDKTG TLTTNMMSVS KICVVQSAEH GPMINEFTVS GTTYAPEGTV FDSNGMQLDL
401: PAQSPCLHHL AMCSSLCNDS ILQYNPDKDS YEKIGESTEV ALRVLAEKVG LPGFDSMPSA LNMLSKHERA SYCNHYWENQ FKKVYVLEFT RDRKMMSVLC
501: SHKQMDVMFS KGAPESIIAR CNKILCNGDG SVVPLTAAGR AELESRFYSF GDETLRCLAL AFKTVPHGQQ TISYDNENDL TFIGLVGMLD PPREEVRDAM
601: LACMTAGIRV IVVTGDNKST AESLCRKIGA FDNLVDFSGM SYTASEFERL PAVQQTLALR RMTLFSRVEP SHKRMLVEAL QKQNEVVAMT GDGVNDAPAL
701: KKADIGIAMG SGTAVAKSAS DMVLADDNFA SIVAAVAEGR AIYNNTKQFI RYMISSNIGE VVCIFVAAVL GIPDTLAPVQ LLWVNLVTDG LPATAIGFNK
801: QDSDVMKAKP RKVGEAVVTG WLFFRYLVIG VYVGLATVAG FIWWFVYSDG GPKLTYSELM NFETCALRET TYPCSIFEDR HPSTVAMTVL VVVEMFNALN
901: NLSENQSLLV ITPRSNLWLV GSIILTMLLH VLILYVHPLA VLFSVTPLSW AEWTAVLYLS FPVIIIDELL KFLSRNTGMR FRFRLRKADL LPKDRRDK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.