Factsheet for TraesCS4B01G061900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, secretory
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G060900.1	Wheat	plasma membrane	99.4	99.4
HORVU4Hr1G010200.3	Barley	plasma membrane	99.0	99.0
TraesCS4A01G253500.1	Wheat	peroxisome	99.0	99.0
KXG37640	Sorghum	plasma membrane	94.5	94.5
Zm00001d033886_P001	Maize	mitochondrion	91.0	94.2
Os03t0730800-01	Rice	plasma membrane	60.2	94.06
GSMUA_Achr6P23080_001	Banana	plasma membrane	83.3	84.57
VIT_18s0001g08850.t01	Wine grape	plasma membrane	76.6	82.63
KRH61432	Soybean	plasma membrane	82.3	82.22
Solyc07g022790.2.1	Tomato	plasma membrane	32.4	81.82
AT1G10130.1	Thale cress	plasma membrane	79.8	79.96
Solyc07g022780.2.1	Tomato	mitochondrion	29.1	79.51
CDY22604	Canola	plasma membrane	78.7	78.86
CDX94924	Canola	plasma membrane	65.1	78.53
CDY70305	Canola	plasma membrane	18.8	76.42
Bra031701.1-P	Field mustard	plasma membrane	77.7	71.61
CDY53835	Canola	nucleus, plasma membrane, plastid	21.8	70.78
Bra019960.1-P	Field mustard	plasma membrane	72.0	68.9
CDX93457	Canola	cytosol, nucleus, plasma membrane	69.1	57.34
TraesCS1B01G060700.1	Wheat	golgi	48.0	45.41
TraesCS4B01G201500.2	Wheat	golgi	46.5	43.79
TraesCS1B01G346400.1	Wheat	plastid	26.5	25.98
TraesCS5B01G276500.1	Wheat	plasma membrane	27.5	25.56
TraesCS4B01G258000.2	Wheat	plasma membrane	26.4	25.46
TraesCS5B01G135200.1	Wheat	plasma membrane	26.3	25.39
TraesCS4B01G080300.1	Wheat	plastid	26.5	25.19
TraesCS7B01G150600.7	Wheat	plasma membrane	27.2	25.12
TraesCS1B01G324000.1	Wheat	plasma membrane	25.9	24.86
TraesCS2B01G454000.1	Wheat	plasma membrane	27.0	24.75
TraesCS5B01G075100.2	Wheat	plasma membrane	24.7	24.22
TraesCS6B01G180700.3	Wheat	cytosol, nucleus, plasma membrane	26.5	24.16
TraesCS3B01G519000.1	Wheat	plasma membrane	25.1	24.07
TraesCS4B01G007200.1	Wheat	cytosol, peroxisome, plasma membrane	22.9	23.63

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768
GO:GO:0005783	GO:GO:0005794	GO:GO:0005802	GO:GO:0006810	GO:GO:0006816	GO:GO:0007275
GO:GO:0008150	GO:GO:0012505	GO:GO:0015410	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0033017	GO:GO:0048364	GO:GO:0055071	GO:GO:0070588	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	InterPro:IPR023299	InterPro:P-type_ATPase_IIA	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690
PFAM:PF00702	PFAM:PF13246	PRINTS:PR00119	ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF6
InterPro:P_typ_ATPase	InterPro:SERCA3	SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660
SUPFAM:SSF81665	TIGRFAMs:TIGR01116	TIGRFAMs:TIGR01494	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4B01G061900	EnsemblPlants:TraesCS4B01G061900.1
TIGR:cd02083	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:53587311..53612524

Molecular Weight (calculated)

109568.0 Da

IEP (calculated)

5.854

GRAVY (calculated)

0.183

Length

1000 amino acids

Sequence
(BLAST)

001: MEDAYAKSAA EVLQAFGVDR TKGLSDSQVE QHALLHGKNV LPQEESTPFW KLVLKQFDDL LVKILIAAAV VSFLLARLNG ETGLTAFLEP SVIFMILAAN
101: AAVGVITETN AEKALEELRA YQADVATVLR NGCFSILPAT ELVPGDIVEV GVGCKVPADM RMVEMLSHQL RVDQAILTGE SCSVAKELDS TSAMNAVYQD
201: KTNILFSGTV VVAGRARAVV IGVGSNTAMG SIRDAMLRTE DEATPLKKKL DEFGTFLAKV IAGICILVWV VNIGHFRDPS HGGFLRGAIH YFKVAVALAV
301: AAIPEGLPAV VTTCLALGTK RMARLNAIVR SLPSVETLGC TTVICCDKTG TLTTNMMSVS KVCVVRSVHQ RPITDEYSIS GTTFAPDGFI YDASENQLEF
401: PPQSPCLLHI AMCSALCNES TLQYNPDKKS YEKIGESTEV ALRVLVEKVG LPGFDSMPSA LNMLTKHERA SYCNHYWENQ FRKISVLDFS RDRKMMSVLC
501: SRKQQEIMFS KGAPESVMAR CTHILCNDDG SSVPLTMDIR NELEARFQSF AGKDTLRCLA LALKRMPEGQ QSLSYDDEAN LTFIGLVGML DPPRDEVHSA
601: IHSCMSAGIR VIVVTGDNKS TAESLCRQIG AFEHLDDFTG YSYTASEFEG LPPLERANAL RRMVLFSRVE PSHKKMLVEA LQSHNEVVAM TGDGVNDAPA
701: LKKADIGIAM GSGTAVAKSA SDMVLADDNF ATIVAAVAEG RAIYNNTKQF IRYMISSNIG EVVCIFVAAV LGMPDTLVPV QLLWVNLVTD GLPATAIGFN
801: KPDGNIMAVK PRKVNEAVVS GWLFFRYLVI GAYVGLATIA GFVWWFVYSE DGPRLPYSEL INFDSCSTRQ TSYPCSIFED RHPSTVSMTV LVVVEMFNAL
901: NNLSENQSLL VIHPWSNLWL VGSIILTMLL HVAVLYTEPL SALFSVSPLT LAEWKVVLYL SFPVILIDEV LKFFSRRPQA WSFPLRLWRR EMLPKEARDN

Best Arabidopsis Sequence Match ( AT1G10130.1 )
(BLAST)

001: MEDAYARSVS EVLDFFGVDP TKGLSDSQVV HHSRLYGRNV LPEEKRTPFW KLVLKQFDDL LVKILIVAAI VSFVLALANG ETGLTAFLEP FVILLILAAN
101: AAVGVITETN AEKALEELRA YQANIATVLR NGCFSILPAT ELVPGDIVEV TVGCKIPADL RMIEMSSNTF RVDQAILTGE SCSVEKDVDC TLTTNAVYQD
201: KKNILFSGTD VVAGRGRAVV IGVGSNTAMG SIHDSMLQTD DEATPLKKKL DEFGSFLAKV IAGICVLVWV VNIGHFSDPS HGGFFKGAIH YFKIAVALAV
301: AAIPEGLPAV VTTCLALGTK KMARLNAIVR SLPSVETLGC TTVICSDKTG TLTTNMMSVS KICVVQSAEH GPMINEFTVS GTTYAPEGTV FDSNGMQLDL
401: PAQSPCLHHL AMCSSLCNDS ILQYNPDKDS YEKIGESTEV ALRVLAEKVG LPGFDSMPSA LNMLSKHERA SYCNHYWENQ FKKVYVLEFT RDRKMMSVLC
501: SHKQMDVMFS KGAPESIIAR CNKILCNGDG SVVPLTAAGR AELESRFYSF GDETLRCLAL AFKTVPHGQQ TISYDNENDL TFIGLVGMLD PPREEVRDAM
601: LACMTAGIRV IVVTGDNKST AESLCRKIGA FDNLVDFSGM SYTASEFERL PAVQQTLALR RMTLFSRVEP SHKRMLVEAL QKQNEVVAMT GDGVNDAPAL
701: KKADIGIAMG SGTAVAKSAS DMVLADDNFA SIVAAVAEGR AIYNNTKQFI RYMISSNIGE VVCIFVAAVL GIPDTLAPVQ LLWVNLVTDG LPATAIGFNK
801: QDSDVMKAKP RKVGEAVVTG WLFFRYLVIG VYVGLATVAG FIWWFVYSDG GPKLTYSELM NFETCALRET TYPCSIFEDR HPSTVAMTVL VVVEMFNALN
901: NLSENQSLLV ITPRSNLWLV GSIILTMLLH VLILYVHPLA VLFSVTPLSW AEWTAVLYLS FPVIIIDELL KFLSRNTGMR FRFRLRKADL LPKDRRDK

Arabidopsis Description

ECA3Calcium-transporting ATPase 3, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:Q9SY55]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.