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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, nucleus, plasma membrane

Predictor Summary:
  • cytosol 2
  • nucleus 1
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plasma membrane
Any Predictor:cytosol, nucleus
BaCelLo:cytosol
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX94924 Canola plasma membrane 67.63 98.31
CDY70305 Canola plasma membrane 20.0 97.97
CDY53835 Canola nucleus, plasma membrane, plastid 21.66 84.74
CDY22604 Canola plasma membrane 69.96 84.47
AT1G10130.1 Thale cress plasma membrane 69.79 84.27
Solyc07g022790.2.1 Tomato plasma membrane 27.47 83.59
Solyc07g022780.2.1 Tomato mitochondrion 24.07 79.23
VIT_18s0001g08850.t01 Wine grape plasma membrane 59.34 77.13
KRH61432 Soybean plasma membrane 61.08 73.53
Bra019960.1-P Field mustard plasma membrane 62.9 72.54
GSMUA_Achr6P23080_001 Banana plasma membrane 58.34 71.37
KXG37640 Sorghum plasma membrane 57.43 69.2
HORVU4Hr1G010200.3 Barley plasma membrane 57.43 69.2
TraesCS4A01G253500.1 Wheat peroxisome 57.34 69.1
TraesCS4B01G061900.1 Wheat plasma membrane 57.34 69.1
TraesCS4D01G060900.1 Wheat plasma membrane 57.34 69.1
Zm00001d033886_P001 Maize mitochondrion 54.94 68.53
Os03t0730800-01 Rice plasma membrane 32.95 62.03
CDY06279 Canola plasma membrane 15.85 50.93
CDX95122 Canola cytosol, plasma membrane, vacuole 12.12 47.71
CDY06268 Canola plasma membrane 34.19 40.39
CDY22720 Canola peroxisome, plasma membrane 33.69 40.32
CDY09907 Canola plasma membrane 33.94 40.18
CDY07153 Canola plasma membrane 35.1 40.13
CDY51719 Canola plasma membrane 34.94 39.94
CDY28053 Canola plasma membrane 34.85 38.6
CDY35928 Canola plasma membrane 32.2 37.24
CDY65296 Canola cytosol 1.83 33.33
CDY68458 Canola cytosol, peroxisome, plasma membrane 17.34 31.38
CDY19574 Canola plasma membrane 14.85 29.73
CDY61305 Canola cytosol 11.29 27.93
CDY65295 Canola cytosol 6.06 27.55
CDX89371 Canola plasma membrane 7.55 27.08
CDX76883 Canola plasma membrane 21.16 25.15
CDY49443 Canola plasma membrane 21.08 25.05
CDY22420 Canola plasma membrane 21.08 25.0
CDY14779 Canola plasma membrane 20.58 24.97
CDY44033 Canola plasma membrane 21.08 24.93
CDY11764 Canola plasma membrane 21.0 24.88
CDY40822 Canola plasma membrane 20.91 24.8
CDX93910 Canola plasma membrane 21.24 24.78
CDX90109 Canola plasma membrane 20.91 24.78
CDY34219 Canola plasma membrane 20.91 24.78
CDY10680 Canola plasma membrane 20.83 24.75
CDY38264 Canola plasma membrane 21.99 24.7
CDY29571 Canola plasma membrane 20.75 24.65
CDX67686 Canola cytosol, peroxisome, plasma membrane, plastid 20.91 24.59
CDY10319 Canola plasma membrane 20.91 24.59
CDY20693 Canola cytosol 21.83 24.58
CDX72644 Canola plasma membrane 20.66 24.56
CDY43534 Canola cytosol 21.41 24.34
CDY06915 Canola plasma membrane 20.83 24.32
CDY06114 Canola plasma membrane 20.66 24.29
CDX72049 Canola plasma membrane 20.66 24.29
CDY33829 Canola plasma membrane 20.66 24.29
CDY46716 Canola cytosol 21.49 24.14
CDY30184 Canola plasma membrane 21.24 24.11
CDX68595 Canola plasma membrane 21.16 24.1
CDY27537 Canola plasma membrane 21.33 23.53
CDX82212 Canola plasma membrane 21.16 23.39
CDY32412 Canola plasma membrane 21.16 23.39
CDY37311 Canola plasma membrane 21.08 23.28
CDY32902 Canola plasma membrane 21.66 23.26
CDY19575 Canola plasma membrane 21.08 23.2
CDY50072 Canola plasma membrane 20.91 23.01
CDY53981 Canola cytosol 21.83 22.71
CDX94389 Canola plasma membrane 18.09 21.27
CDX89375 Canola plasma membrane 18.09 21.14
CDY38720 Canola plasma membrane 16.6 20.99
CDX94386 Canola cytosol 17.34 19.87
CDY38719 Canola plasma membrane 15.35 19.35
CDX95120 Canola mitochondrion 0.5 4.17
Protein Annotations
Gene3D:1.20.1110.10Gene3D:2.70.150.10MapMan:24.1.2.2.1Gene3D:3.40.1110.10Gene3D:3.40.50.1000Gene3D:4.10.60.10
GO:A0A078DX24InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cation-transptr_CInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sf
EnsemblPlants:CDX93457ProteinID:CDX93457ProteinID:CDX93457.1GO:GO:0000166GO:GO:0003674GO:GO:0003676
GO:GO:0003824GO:GO:0005215GO:GO:0005388GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0006810GO:GO:0006816GO:GO:0008150
GO:GO:0008270GO:GO:0016020GO:GO:0016021GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00156125001InterPro:HAD-like_sf
InterPro:HAD_sfInterPro:IPR001878InterPro:IPR023214InterPro:IPR023299InterPro:P-type_ATPase_IIAPFAM:PF00098
PFAM:PF00122PFAM:PF00689PFAM:PF00702PFAM:PF13246PFAM:PF14223PRINTS:PR00119
PRINTS:PR00120ScanProsite:PS00154PFscan:PS50158PANTHER:PTHR42861PANTHER:PTHR42861:SF39InterPro:P_typ_ATPase
SMART:SM00343SUPFAM:SSF56784SUPFAM:SSF57756SUPFAM:SSF81653SUPFAM:SSF81660SUPFAM:SSF81665
TIGRFAMs:TIGR01116TIGRFAMs:TIGR01494TMHMM:TMhelixUniParc:UPI0004EECA02InterPro:Znf_CCHCInterPro:Znf_CCHC_sf
SEG:seg:::::
Description
BnaA06g05910D
Coordinates
chrLK031876:-:258771..267420
Molecular Weight (calculated)
133280.0 Da
IEP (calculated)
7.549
GRAVY (calculated)
-0.060
Length
1205 amino acids
Sequence
(BLAST)
0001: MEPTKGRFEV EKFDGEGDFA LWKHKMMAQF EILGLDSVLQ PEEDDLKGKG VEGDGSDAKP KKDPKWLEKD RRVRNLLSMS LSDMVLRKVI KSRSALEMWT
0101: ALEATYQIKS LPNRFYLKQR FYSYKMEDDK NLDKNLDVFT KLVSDLASLD VELSEEDQAV ILLNSLPRRF EPLVHTLKYG RDQETITLKE ITRAAYSIEL
0201: DMKAKGSSGS SGTSGEGLYF QSRGRSEKKT TSKVKSNSRS KSRPKFKKTC WVCGVEGHFK RECPKRNNSN GSVKAEASVG KAEYHEPLML TASCHLNREG
0301: WVLDSGCSYH MTFRKDLMFD VEEINGGKIL MGNDTFCEIT AIGKVKFVSY NKSEVILTGV RYSESARRNL ISLGQLETLG CFFSTSESCS VEKDVDCPLT
0401: TNAVYQDKKN ILFSGTDVVA GRGRAVVVGV GSNTAMGSIH DSMLHTDDEA TPLKKKLDEF GSFLAKVIAG ICVLVWVVNI GHFSDPSHGG FFKGAIHYFK
0501: IAVALAVAAI PEGLPAVVTT CLALGTKKMA RLNAIVRSLP SVETLGCTTV ICSDKTGTLT TNMMSVSKIC VVQSADHGPV INEFSVSGTT YAPEGTVFDN
0601: NGQQLDFPAQ SPCLHHLAMC SSLCNDSILQ YNPDKDSYEK IGESTEVALR VLAEKVGLPG FDSMPSALNM LSKHERAAYC NHYWENQFKK VYVLEFTRDR
0701: KMMSVLCSHK QMDVMFSKGA PESIIARCTK LLCNSDGSVV PLTAAARAEL ESRFHSFGDE TLRCLALAFK TVPHGQQTIS YDNENDLTFI GLVGILDPPR
0801: KEVRDAMLAC MTAGIRVIVV TGDNKSTAES ICRKIGAFDN LVEFSGLSYT ASEFERLPAV QQSLALRRMT LFSRVEPSHK RMLVEALQNQ NEVVAMTGDG
0901: VNDAPALKKA DIGIAMGSGT AVAKSASDMV LADDNFASIV AAVAEGRAIY NNTKQFIRYM ISSNIGEVVC IFVAAVLGIP DTLAPVQLLW VNLVTDGLPA
1001: TAIGFNKQDS DVMKAKPRKV GEAVVTGWLF FRYLVIGVYV GLATVAGFIW WFVYSEGGPK LTYSELMNFE TCALRETSYP CSIFEDRHPS TVAMTVLVVV
1101: EMFNALNNLS ENQSLLVITP RSNLWLVGSI ILTMVLHMLI LYVHPLAVLF SVTPLSWAEW TAVLYLSFPV IIIDEVLKFL SRNTGLRFRF RLRKTDLLPK
1201: DRRDK
Best Arabidopsis Sequence Match ( AT1G10130.1 )
(BLAST)
001: MEDAYARSVS EVLDFFGVDP TKGLSDSQVV HHSRLYGRNV LPEEKRTPFW KLVLKQFDDL LVKILIVAAI VSFVLALANG ETGLTAFLEP FVILLILAAN
101: AAVGVITETN AEKALEELRA YQANIATVLR NGCFSILPAT ELVPGDIVEV TVGCKIPADL RMIEMSSNTF RVDQAILTGE SCSVEKDVDC TLTTNAVYQD
201: KKNILFSGTD VVAGRGRAVV IGVGSNTAMG SIHDSMLQTD DEATPLKKKL DEFGSFLAKV IAGICVLVWV VNIGHFSDPS HGGFFKGAIH YFKIAVALAV
301: AAIPEGLPAV VTTCLALGTK KMARLNAIVR SLPSVETLGC TTVICSDKTG TLTTNMMSVS KICVVQSAEH GPMINEFTVS GTTYAPEGTV FDSNGMQLDL
401: PAQSPCLHHL AMCSSLCNDS ILQYNPDKDS YEKIGESTEV ALRVLAEKVG LPGFDSMPSA LNMLSKHERA SYCNHYWENQ FKKVYVLEFT RDRKMMSVLC
501: SHKQMDVMFS KGAPESIIAR CNKILCNGDG SVVPLTAAGR AELESRFYSF GDETLRCLAL AFKTVPHGQQ TISYDNENDL TFIGLVGMLD PPREEVRDAM
601: LACMTAGIRV IVVTGDNKST AESLCRKIGA FDNLVDFSGM SYTASEFERL PAVQQTLALR RMTLFSRVEP SHKRMLVEAL QKQNEVVAMT GDGVNDAPAL
701: KKADIGIAMG SGTAVAKSAS DMVLADDNFA SIVAAVAEGR AIYNNTKQFI RYMISSNIGE VVCIFVAAVL GIPDTLAPVQ LLWVNLVTDG LPATAIGFNK
801: QDSDVMKAKP RKVGEAVVTG WLFFRYLVIG VYVGLATVAG FIWWFVYSDG GPKLTYSELM NFETCALRET TYPCSIFEDR HPSTVAMTVL VVVEMFNALN
901: NLSENQSLLV ITPRSNLWLV GSIILTMLLH VLILYVHPLA VLFSVTPLSW AEWTAVLYLS FPVIIIDELL KFLSRNTGMR FRFRLRKADL LPKDRRDK
Arabidopsis Description
ECA3Calcium-transporting ATPase 3, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:Q9SY55]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.