CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
golgi 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, golgi, plasma membrane
BaCelLo:	cytosol
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06279	Canola	plasma membrane	36.74	99.73
CDY06268	Canola	plasma membrane	98.62	98.43
Bra031583.1-P	Field mustard	plasma membrane	89.19	94.19
CDX95122	Canola	cytosol, plasma membrane, vacuole	28.09	93.46
AT1G07670.2	Thale cress	plasma membrane	94.11	90.29
CDY22720	Canola	peroxisome, plasma membrane	89.29	90.27
CDY35928	Canola	plasma membrane	92.24	90.12
AT1G07810.1	Thale cress	plasma membrane	93.12	89.35
CDY68458	Canola	cytosol, peroxisome, plasma membrane	57.86	88.44
CDY28053	Canola	plasma membrane	93.32	87.32
Os05t0120700-01	Rice	plasma membrane	22.79	82.56
VIT_06s0004g03900.t01	Wine grape	plasma membrane	81.04	77.76
KRG95874	Soybean	endoplasmic reticulum	79.96	76.79
PGSC0003DMT400040184	Potato	plasma membrane	79.67	76.44
Solyc11g072880.1.1	Tomato	nucleus, plastid, unclear	79.47	76.25
KRH67591	Soybean	endoplasmic reticulum	78.78	75.66
EER92445	Sorghum	plasma membrane	77.41	74.27
Zm00001d047769_P001	Maize	plasma membrane	77.41	74.2
Zm00001d028687_P001	Maize	extracellular, mitochondrion	77.31	74.18
TraesCS4A01G103000.2	Wheat	unclear	76.03	72.88
TraesCS4B01G201500.2	Wheat	golgi	75.93	72.79
TraesCS4D01G202200.2	Wheat	plasma membrane	75.83	72.69
GSMUA_Achr2P16100_001	Banana	plasma membrane	64.73	72.42
Os03t0281600-01	Rice	plasma membrane	59.63	71.83
HORVU1Hr1G007310.1	Barley	plasma membrane	73.77	71.59
TraesCS1D01G047900.1	Wheat	plasma membrane	74.07	71.54
TraesCS1B01G060700.1	Wheat	golgi	74.07	71.33
TraesCS1A01G047000.1	Wheat	plasma membrane	73.97	71.24
GSMUA_Achr6P15410_001	Banana	plasma membrane	62.18	70.73
HORVU4Hr1G058210.4	Barley	plastid	75.15	70.64
EES18919	Sorghum	plasma membrane	72.69	69.94
Zm00001d011013_P001	Maize	plasma membrane	71.61	69.3
GSMUA_Achr3P17740_001	Banana	plasma membrane	67.78	67.71
GSMUA_Achr10P...	Banana	plasma membrane	59.04	67.38
CDY61305	Canola	cytosol	32.22	67.35
CDY07153	Canola	plasma membrane	65.03	62.81
CDY51719	Canola	plasma membrane	64.93	62.71
CDY70305	Canola	plasma membrane	11.89	49.19
CDY53835	Canola	nucleus, plasma membrane, plastid	14.24	47.08
CDY22604	Canola	plasma membrane	45.78	46.69
CDX94924	Canola	plasma membrane	36.94	45.36
CDX93457	Canola	cytosol, nucleus, plasma membrane	40.18	33.94
CDY65296	Canola	cytosol	2.16	33.33
CDY19574	Canola	plasma membrane	16.99	28.74
CDY14779	Canola	plasma membrane	26.52	27.19
CDY65295	Canola	cytosol	6.97	26.79
CDX76883	Canola	plasma membrane	26.52	26.63
CDY49443	Canola	plasma membrane	26.52	26.63
CDY22420	Canola	plasma membrane	26.52	26.57
CDY06915	Canola	plasma membrane	26.82	26.45
CDY44033	Canola	plasma membrane	26.42	26.4
CDX90109	Canola	plasma membrane	26.33	26.35
CDY29571	Canola	plasma membrane	26.23	26.33
CDX72644	Canola	plasma membrane	26.23	26.33
CDY11764	Canola	plasma membrane	26.23	26.25
CDY06114	Canola	plasma membrane	26.42	26.24
CDX89371	Canola	plasma membrane	8.64	26.19
CDX72049	Canola	plasma membrane	26.33	26.15
CDX82212	Canola	plasma membrane	27.8	25.96
CDY32412	Canola	plasma membrane	27.8	25.96
CDX67686	Canola	cytosol, peroxisome, plasma membrane, plastid	26.13	25.95
CDY10680	Canola	plasma membrane	25.84	25.94
CDY27537	Canola	plasma membrane	27.7	25.82
CDY37311	Canola	plasma membrane	27.6	25.76
CDY33829	Canola	plasma membrane	25.93	25.76
CDY40822	Canola	plasma membrane	25.64	25.69
CDY50072	Canola	plasma membrane	27.5	25.57
CDY34219	Canola	plasma membrane	25.54	25.57
CDX93910	Canola	plasma membrane	25.93	25.56
CDY19575	Canola	plasma membrane	27.41	25.48
CDY10319	Canola	plasma membrane	25.64	25.46
CDY38264	Canola	plasma membrane	26.42	25.07
CDY20693	Canola	cytosol	26.13	24.86
CDY46716	Canola	cytosol	26.03	24.7
CDX68595	Canola	plasma membrane	25.64	24.67
CDY43534	Canola	cytosol	25.64	24.62
CDY30184	Canola	plasma membrane	25.54	24.48
CDY32902	Canola	plasma membrane	26.23	23.8
CDY53981	Canola	cytosol	26.33	23.14
CDY38720	Canola	plasma membrane	20.83	22.25
CDY38719	Canola	plasma membrane	20.14	21.44
CDX89375	Canola	plasma membrane	21.51	21.24
CDX94389	Canola	plasma membrane	21.32	21.17
CDX94386	Canola	cytosol	21.61	20.91
CDX95120	Canola	mitochondrion	0.69	4.86

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.1	Gene3D:3.40.1110.10	GO:A0A078FA24	UniProt:A0A078FA24
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlants:CDY09907
ProteinID:CDY09907	ProteinID:CDY09907.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00031669001
InterPro:HAD-like_sf	InterPro:IPR023299	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF00702
PFAM:PF13246	PRINTS:PR00119	PANTHER:PTHR42861	PANTHER:PTHR42861:SF4	InterPro:P_typ_ATPase	SMART:SM00831
SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TMHMM:TMhelix
UniParc:UPI0004EEB4D5	:	:	:	:	:

Description

BnaC08g45440DBnaC08g45440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FA24]

Coordinates

chrLK032000:-:23882..28011

Molecular Weight (calculated)

111366.0 Da

IEP (calculated)

4.823

GRAVY (calculated)

0.043

Length

1018 amino acids

Sequence
(BLAST)

0001: MGKGGDDLGT NKQTNGSESS NFEPFPPWAK DVRECEDHFG VSAEKGLTTD DVAKRHQIYG LNELEKPEGT SLFKLILEQF NDTLVRILLA AAVISFVLAF
0101: VDGDEGGEMA ITAFVEPLVI FLILIVNAVV GIWQETNAEK ALEALKEIQS QQATVTRDGV KMSSLPAKEL VPGDVVELRV GDKVPADMRV VRLISSTLRV
0201: EQGSLTGESE AVSKTTKPVE ENADIQGKKC MVFAGTTVVN GSCVCLVTHT GMSTEIGRVH SQIQEAAQHE EDTPLKKKLN EFGEALTMII GLICALVWLI
0301: NVKYFLSWES VDGWPRNFKF SFEKCTYYFE IAVALAVAAI PEGLPAVITT CLALGTRKMA QKNALVRKLP SVETLGCTTI EDWPVGRMDT NLQMIAKIAA
0401: ICNDADVEKS ENQFVARGMP TEAALKVLVE KMGFPEGANK ASSLADGDVL RCCRLWSELE QRIATLEFDR DRKSMGVMVD SSSGKKLLLV KGAVENVLER
0501: STHIQLLDGS TQELDQYSRD LILQSLHDMS MSALRCLGFA YSDVPSDFAT YDGSEDHPAH QQLLNPSNYS SIESNLTFVG FVGLRDPPRK EVRQAIADCR
0601: TAGIRVMVIT GDNKSTAEAI CREIGVFEAD EDISSRSLTG KEFMDVKDQK NHLRQSGGLL FSRAEPKHKQ EIVRLLKEDG EVVAMTGDGV NDAPALKLAD
0701: IGVAMGISGT EVAKEASDMV LADDNFSTIV AAVGEGRSIY NNMKAFIRYM ISSNIGEVAS IFLTAALGIP EGMIPVQLLW VNLVTDGPPA TALGFNPPDK
0801: DIMKKPPRRS DDSLITAWIL FRYLVIGMYV GVATVGVFII WYTHSSFMGI DLSQDGHSLV SYSQLAHWGQ CSSWEGFKVS PFTAGSQTFS FESNPCEYFH
0901: QGKIKASTLS LSVLVAIEMF NSLNALSEDG SLVTMPPWVN PWLLLAMAVS FGLHFVILYV PFLAQVFGIV PLSLNEWLLV LAVSLPVILI DEVLKFVGRL
1001: TSGYRYSPRT PSAKQKTE

Best Arabidopsis Sequence Match ( AT1G07670.1 )
(BLAST)

0001: MGKGGEDCGN KQTNSSELVK SDTFPAWGKD VSECEEKFGV SREKGLSTDE VLKRHQIYGL NELEKPEGTS IFKLILEQFN DTLVRILLAA AVISFVLAFF
0101: DGDEGGEMGI TAFVEPLVIF LILIVNAIVG IWQETNAEKA LEALKEIQSQ QATVMRDGTK VSSLPAKELV PGDIVELRVG DKVPADMRVV ALISSTLRVE
0201: QGSLTGESEA VSKTTKHVDE NADIQGKKCM VFAGTTVVNG NCICLVTDTG MNTEIGRVHS QIQEAAQHEE DTPLKKKLNE FGEVLTMIIG LICALVWLIN
0301: VKYFLSWEYV DGWPRNFKFS FEKCTYYFEI AVALAVAAIP EGLPAVITTC LALGTRKMAQ KNALVRKLPS VETLGCTTVI CSDKTGTLTT NQMAVSKLVA
0401: MGSRIGTLRS FNVEGTSFDP RDGKIEDWPT GRMDANLQMI AKIAAICNDA NVEKSDQQFV SRGMPTEAAL KVLVEKMGFP EGLNEASSDG NVLRCCRLWS
0501: ELEQRIATLE FDRDRKSMGV MVDSSSGKKL LLVKGAVENV LERSTHIQLL DGSTRELDQY SRDLILQSLH DMSLSALRCL GFAYSDVPSD FATYDGSEDH
0601: PAHQQLLNPS NYSSIESNLV FVGFVGLRDP PRKEVRQAIA DCRTAGIRVM VITGDNKSTA EAICREIGVF EADEDISSRS LTGKEFMDVK DQKNHLRQTG
0701: GLLFSRAEPK HKQEIVRLLK EDGEVVAMTG DGVNDAPALK LADIGVAMGI SGTEVAKEAS DLVLADDNFS TIVAAVGEGR SIYNNMKAFI RYMISSNIGE
0801: VASIFLTAAL GIPEGMIPVQ LLWVNLVTDG PPATALGFNP PDKDIMKKPP RRSDDSLITA WILFRYMVIG LYVGVATVGV FIIWYTHNSF MGIDLSQDGH
0901: SLVSYSQLAH WGQCSSWEGF KVSPFTAGSQ TFSFDSNPCD YFQQGKIKAS TLSLSVLVAI EMFNSLNALS EDGSLVTMPP WVNPWLLLAM AVSFGLHFVI
1001: LYVPFLAQVF GIVPLSLNEW LLVLAVSLPV ILIDEVLKFV GRCTSGYRYS PRTPSAKQKE E

Arabidopsis Description

ECA4Calcium-transporting ATPase 4, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:Q9XES1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.