CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
peroxisome 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38720	Canola	plasma membrane	72.49	72.72
AT5G53010.1	Thale cress	plasma membrane	67.47	61.49
CDY65296	Canola	cytosol	3.87	56.06
CDX89371	Canola	plasma membrane	19.35	55.06
CDY65295	Canola	cytosol	12.97	46.79
CDX94386	Canola	cytosol	47.7	43.35
CDX94389	Canola	plasma membrane	44.77	41.76
CDX89375	Canola	plasma membrane	44.35	41.13
CDY19574	Canola	plasma membrane	25.73	40.86
CDY20693	Canola	cytosol	42.89	38.32
CDY38264	Canola	plasma membrane	42.57	37.93
CDX68595	Canola	plasma membrane	41.74	37.71
CDY46716	Canola	cytosol	42.26	37.65
CDY43534	Canola	cytosol	41.63	37.55
CDY30184	Canola	plasma membrane	41.42	37.29
CDY32902	Canola	plasma membrane	42.47	36.19
CDY37311	Canola	plasma membrane	41.21	36.11
CDY50072	Canola	plasma membrane	41.32	36.07
CDY19575	Canola	plasma membrane	41.32	36.07
CDY27537	Canola	plasma membrane	41.0	35.9
CDX82212	Canola	plasma membrane	40.69	35.69
CDY32412	Canola	plasma membrane	40.69	35.69
CDY53981	Canola	cytosol	42.47	35.06
CDY40822	Canola	plasma membrane	35.15	33.07
CDY34219	Canola	plasma membrane	34.83	32.74
CDY10680	Canola	plasma membrane	34.62	32.64
CDY10319	Canola	plasma membrane	34.52	32.2
CDY49443	Canola	plasma membrane	33.37	31.46
CDY14779	Canola	plasma membrane	32.64	31.42
CDX76883	Canola	plasma membrane	33.16	31.26
CDY29571	Canola	plasma membrane	33.16	31.26
CDX72644	Canola	plasma membrane	33.16	31.26
CDY22420	Canola	plasma membrane	33.16	31.2
CDY44033	Canola	plasma membrane	33.05	31.01
CDX93910	Canola	plasma membrane	33.37	30.88
CDY06915	Canola	plasma membrane	32.43	30.04
CDX67686	Canola	cytosol, peroxisome, plasma membrane, plastid	31.59	29.46
CDY33829	Canola	plasma membrane	31.49	29.37
CDY06114	Canola	plasma membrane	31.28	29.17
CDX90109	Canola	plasma membrane	30.86	29.01
CDX72049	Canola	plasma membrane	31.07	28.98
CDY11764	Canola	plasma membrane	30.75	28.91
CDY53835	Canola	nucleus, plasma membrane, plastid	7.95	24.68
CDY06279	Canola	plasma membrane	8.58	21.87
CDY06268	Canola	plasma membrane	21.76	20.39
CDY09907	Canola	plasma membrane	21.44	20.14
CDY07153	Canola	plasma membrane	22.07	20.02
CDY51719	Canola	plasma membrane	21.97	19.92
CDX94924	Canola	plasma membrane	17.26	19.9
CDY22604	Canola	plasma membrane	20.71	19.84
CDY22720	Canola	peroxisome, plasma membrane	20.4	19.36
CDY35928	Canola	plasma membrane	20.71	19.0
CDY68458	Canola	cytosol, peroxisome, plasma membrane	13.08	18.77
CDY28053	Canola	plasma membrane	21.34	18.75
CDX95122	Canola	cytosol, plasma membrane, vacuole	5.96	18.63
CDY61305	Canola	cytosol	8.58	16.84
CDY70305	Canola	plasma membrane	4.08	15.85
CDX93457	Canola	cytosol, nucleus, plasma membrane	19.35	15.35
CDX95120	Canola	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	GO:A0A078HMX8
UniProt:A0A078HMX8	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf
EnsemblPlants:CDY38719	ProteinID:CDY38719	ProteinID:CDY38719.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00066497001	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	InterPro:IPR023299	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF00702
PFAM:PF13246	PRINTS:PR00119	PRINTS:PR00120	PANTHER:PTHR24093	PANTHER:PTHR24093:SF368	InterPro:P_typ_ATPase
SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TMHMM:TMhelix
UniParc:UPI0004EF340E	SEG:seg	:	:	:	:

Description

BnaC03g15300DBnaC03g15300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HMX8]

Coordinates

chrLK032431:+:44904..52591

Molecular Weight (calculated)

105534.0 Da

IEP (calculated)

6.686

GRAVY (calculated)

0.170

Length

956 amino acids

Sequence
(BLAST)

001: MYRISKDLES GLGGYHVSTA HDAAPEDIEI VIGASADNLE SGTNVQDGDS GAHDRRSSWL CTSLMSSMSR PNDDAVGGLS TLLKTDLERG IDRRDDEILQ
101: RRQAFGSNTY PCKKGKTFWS FVWKACQFPL SLVMIIAVVI NSILLRIKRK AIHDGLYVET CAISATVLDI ILRAFIEYKQ SRQSEKASEE KRNVPQDVIR
201: GGRRLSVCTN DIVVGDIVPL KNGCQVPADG VLFVANSLKI DEQEITGSHL IVQKDILKDP FLLSGSKVIE GIGTMLVTSV GTNTEWGKKI ETQPEMDEEK
301: PFQVLYRYVK RLAISASWLV IMLASIACIV QLCRYFNGRT KNSDGTPMYI PGNTTLDEAI EFVIKSLSFG MGTIIVAVPV GLFIAVLLNL ANTTRKMMTD
401: NALMSVVDVW AGGIRVQHVE DVSHFPSIPT KLIIEGIAQN TNGSVVFEAG VTEPEVYGSP TEQAILNWGN KLGMKFDEAR SGSPVLHVIP FNPKKKYGGV
501: ALQVGTGHHI HWKGSAKVIL NSCQWYMDGA NNRIAIGGQR REMEGIIGDM SMRGMRCAAL AYQSYELGSL PTTDEELCTL PQDLVLLAII GIKDPCRPGT
601: RDAVELCKYG GIKVCMVTED EVSTAQAMAI ECGILRDTSG EHIRTAAQFC DLTDLEREQI SGDILVLAQA SPEDSLLFVK ALKRKGYVVA ATGMGIHDTK
701: TLHVADVSLA MGIGGTAAAK ENSDIIILDD SFATIVKVIQ WCRYLYTNIQ RYVLFRLTVS VSAVAICVVE VVFYNAFPLN AVQLLLLNLI VDIFGALALA
801: YRPSARKLMG KPPVGIRDHL VTKTMWFKIV IQVIYLVLLL ALIHSDSILK LDHGQTADTE KLKNTFIFNS LVFCLVFNEF EIRSGDQTLK EILRDNMFIV
901: TITSTIIFQI ILIEFLGIFI SAVRLDLKKW LISILVGFLS QVATRFPLEA YQYYRH

Best Arabidopsis Sequence Match ( AT5G53010.1 )
(BLAST)

0001: MVVFNLSMFR FWKRPSPNVG PGDLEIGLGG GYSSSLADDD VVIPHPPVAE DVPSELEAGI DPEAALENIA PHDLEAGHVT THRWRRVRTL KRASVAFYQV
0101: VICQMLRRNR TGTVPDQALV HDDHQETEQS SNEASTSGGF GIGVEELVQL VKERSLEALN RYNGVHGLSN LLKTDLKVGI DRRDDEILLR RNAYGSNTYP
0201: CKKGKTFWYF LWRASQFSHL LVIMFAAVFF SLLRIKTKGI LDGWYIEACI VLVTVFHIIA IAVAEYKQSC RFIKLTEEKR TVYLEVIRGG RRVRVSIYDI
0301: VVGDIVPLKN GCQVPADGVL FVANSLKVAE QEVTASDEIV QKDLQTNPFL LSGSKLIEGI GTMLVTSVGM NTEWGLKMEV SQKTDEEKPF QGYLKWLAIS
0401: ASWFVVLFAS VACSIQVGGS SAPSWQGPNN RFISRYFSGV TKKSDGTPMF IYGITTADEA IEFVITSLSF GIATIVVAVP VGLSIAVRLN FAKTTKKMRK
0501: DKVLMSVVDV WAGGIRMQDM DDVSQLPTFL KELIIEGIAQ NTNGSVVFET GVTEPEVYGS PTEQAILNFG NKLGMKFDDA RSASLVRHTI PFNPKKKYGG
0601: VALQLGTHAH VHWKGSAKTI LSSCEGYMDG ANNSRAINEQ KRKSFEGTIE NMSKEGLRCA ALAYQPCELG SLPTITEPRN LVLLAIVGIK DPCRPGTRDA
0701: IQLCNSGSVK VCMVTDNDGL TAQAIAIECG ILTDASGRNI RTGAQFRELS DLEREQIAGD ILVFAQSSPN DNLLLVQALK KRGHIVAATG MGIHDPKTLR
0801: EADVSLAMGV GGTAAAKENS DFIILDDNFA TIVKCIIWSR SLYNNVQKSI LFRLTVSVSA LAVCVVEVVV YDAFPLNAVQ FLLVNLIIDI LGALALAYRP
0901: RSDHHLMGKP PVGIRDPLIT KTMWSKMIIQ VFYLVLSLVL INSEKLLKLK HGQTGNAEKM MNTLIFNSFV FYLVFNEFEI QSVDQTFKEV LRENMFLVTI
1001: TSTIISQIIV IKFAGIFIDL KKWVTTSLLG LLSQVATRYP YPAIQYHRN

Arabidopsis Description

Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F4KHQ2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.