CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, golgi, plasma membrane
BaCelLo:	cytosol
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06279	Canola	plasma membrane	36.67	99.73
CDY09907	Canola	plasma membrane	98.43	98.62
Bra031583.1-P	Field mustard	plasma membrane	89.9	95.12
CDX95122	Canola	cytosol, plasma membrane, vacuole	28.04	93.46
AT1G07670.2	Thale cress	plasma membrane	94.22	90.57
CDY22720	Canola	peroxisome, plasma membrane	89.22	90.37
CDY35928	Canola	plasma membrane	91.96	90.02
AT1G07810.1	Thale cress	plasma membrane	93.43	89.82
CDY68458	Canola	cytosol, peroxisome, plasma membrane	57.65	88.29
CDY28053	Canola	plasma membrane	93.24	87.41
Os05t0120700-01	Rice	plasma membrane	22.75	82.56
VIT_06s0004g03900.t01	Wine grape	plasma membrane	81.27	78.13
KRG95874	Soybean	endoplasmic reticulum	80.2	77.17
PGSC0003DMT400040184	Potato	plasma membrane	79.71	76.63
Solyc11g072880.1.1	Tomato	nucleus, plastid, unclear	79.51	76.44
KRH67591	Soybean	endoplasmic reticulum	79.02	76.04
EER92445	Sorghum	plasma membrane	77.55	74.55
Zm00001d047769_P001	Maize	plasma membrane	77.55	74.48
Zm00001d028687_P001	Maize	extracellular, mitochondrion	77.45	74.46
TraesCS4A01G103000.2	Wheat	unclear	76.08	73.07
TraesCS4B01G201500.2	Wheat	golgi	75.98	72.98
TraesCS4D01G202200.2	Wheat	plasma membrane	75.88	72.88
GSMUA_Achr2P16100_001	Banana	plasma membrane	64.61	72.42
Os03t0281600-01	Rice	plasma membrane	59.8	72.19
HORVU1Hr1G007310.1	Barley	plasma membrane	73.92	71.88
TraesCS1D01G047900.1	Wheat	plasma membrane	74.12	71.73
TraesCS1B01G060700.1	Wheat	golgi	74.12	71.52
TraesCS1A01G047000.1	Wheat	plasma membrane	74.02	71.43
GSMUA_Achr6P15410_001	Banana	plasma membrane	62.25	70.95
HORVU4Hr1G058210.4	Barley	plastid	75.0	70.64
EES18919	Sorghum	plasma membrane	72.75	70.13
Zm00001d011013_P001	Maize	plasma membrane	71.96	69.77
CDY61305	Canola	cytosol	32.65	68.38
GSMUA_Achr3P17740_001	Banana	plasma membrane	67.65	67.71
GSMUA_Achr10P...	Banana	plasma membrane	58.73	67.15
CDY07153	Canola	plasma membrane	65.39	63.28
CDY51719	Canola	plasma membrane	65.29	63.19
CDY70305	Canola	plasma membrane	11.86	49.19
CDY22604	Canola	plasma membrane	46.08	47.09
CDY53835	Canola	nucleus, plasma membrane, plastid	14.22	47.08
CDX94924	Canola	plasma membrane	37.16	45.72
CDX93457	Canola	cytosol, nucleus, plasma membrane	40.39	34.19
CDY65296	Canola	cytosol	2.16	33.33
CDY19574	Canola	plasma membrane	17.16	29.07
CDY14779	Canola	plasma membrane	26.57	27.29
CDY65295	Canola	cytosol	6.96	26.79
CDX76883	Canola	plasma membrane	26.57	26.73
CDY49443	Canola	plasma membrane	26.57	26.73
CDY22420	Canola	plasma membrane	26.57	26.67
CDX90109	Canola	plasma membrane	26.47	26.55
CDY44033	Canola	plasma membrane	26.47	26.5
CDY06915	Canola	plasma membrane	26.76	26.45
CDY11764	Canola	plasma membrane	26.37	26.45
CDY06114	Canola	plasma membrane	26.57	26.44
CDX72644	Canola	plasma membrane	26.27	26.43
CDY29571	Canola	plasma membrane	26.27	26.43
CDX72049	Canola	plasma membrane	26.47	26.34
CDY10680	Canola	plasma membrane	26.08	26.23
CDX89371	Canola	plasma membrane	8.63	26.19
CDX67686	Canola	cytosol, peroxisome, plasma membrane, plastid	26.18	26.05
CDY40822	Canola	plasma membrane	25.88	25.98
CDY32412	Canola	plasma membrane	27.75	25.96
CDX82212	Canola	plasma membrane	27.75	25.96
CDY34219	Canola	plasma membrane	25.78	25.86
CDY33829	Canola	plasma membrane	25.98	25.85
CDX93910	Canola	plasma membrane	26.18	25.85
CDY27537	Canola	plasma membrane	27.65	25.82
CDY37311	Canola	plasma membrane	27.55	25.76
CDY10319	Canola	plasma membrane	25.88	25.76
CDY50072	Canola	plasma membrane	27.45	25.57
CDY19575	Canola	plasma membrane	27.45	25.57
CDY38264	Canola	plasma membrane	26.57	25.26
CDY20693	Canola	cytosol	26.37	25.14
CDY46716	Canola	cytosol	25.98	24.7
CDX68595	Canola	plasma membrane	25.59	24.67
CDY43534	Canola	cytosol	25.59	24.62
CDY30184	Canola	plasma membrane	25.49	24.48
CDY32902	Canola	plasma membrane	26.47	24.06
CDY53981	Canola	cytosol	26.47	23.32
CDY38720	Canola	plasma membrane	20.98	22.46
CDY38719	Canola	plasma membrane	20.39	21.76
CDX89375	Canola	plasma membrane	21.76	21.53
CDX94389	Canola	plasma membrane	21.47	21.37
CDX94386	Canola	cytosol	21.96	21.29
CDX95120	Canola	mitochondrion	0.69	4.86

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	GO:A0A078F3E2
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlants:CDY06268
ProteinID:CDY06268	ProteinID:CDY06268.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00122187001	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
InterPro:IPR023299	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF00702	PFAM:PF13246
PRINTS:PR00119	PANTHER:PTHR42861	PANTHER:PTHR42861:SF4	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TMHMM:TMhelix	UniParc:UPI0004EF14AB

Description

BnaA09g49350D

Coordinates

chrLK031968:+:563550..567718

Molecular Weight (calculated)

111595.0 Da

IEP (calculated)

4.854

GRAVY (calculated)

0.055

Length

1020 amino acids

Sequence
(BLAST)

0001: MGKGGEDLGI NKQTSGSESS NSEPWAKDVR ECEDHFGVSV EKGLTTDDVA KRHQIYGLNE LEKPEGTSLF KLILEQFNDT LVRILLAAAV ISFVLAFVDG
0101: DEGGEMGITA FVEPLVIFLI LIVNAVVGIW QETNAEKALE ALKEIQSQQA TVTRDGVKLS SLPAKELVPG DVVELRVGDK VPADMRVVRL ISSTLRVEQG
0201: SLTGESEAVS KTTKPVEENA DIQGKKCMVF AGTTVVNGSC VCLVTHTGMS TEIGRVHSQI QEAAQHEEDT PLKKKLNEFG EALTMIIGLI CALVWLINVK
0301: YFLSWEYVDG WPRNFKFSFE KCTYYFEIAV ALAVAAIPEG LPAVITTCLA LGTRKMAQKN ALVRKLPSVE TLGCTTVIYG KIEDWPAGRM DTNLQMIAKI
0401: AAICNDADVE KSENQFVARG MPTEAALKVL VEKMGFPEGA NKASSLADGD VLRCCRLWSE LEQRIATLEF DRDRKSMGVM VDSSSGKKLL LVKGAVENVL
0501: ERSTHIQLLD GSIQELDQYS RDLILQSLHD MSMSALRCLG FAYSDVPSDF ATYDGSEDHP AHQQLLNPSN YSSIESNLTF VGFVGLRDPP RKEVRQAIAD
0601: CRTAGIRVMV ITGDNKSTAE AICREIGVFE ADEDISTRSL TGKEFMDVKD QKNHLRQSGG LLFSRAEPKH KQEIVRLLKE DGEVVAMTGD GVNDAPALKL
0701: ADIGVAMGIS GTEVAKEASD MVLADDNFST IVAAVGEGRS IYNNMKAFIR YMISSNIGEV ASIFLTAALG IPEGMIPVQL LWVNLVTDGP PATALGFNPP
0801: DKDIMKKPPR RSDDSLITAW ILFRYLVIGM YVGVATVGVF IIWYTHSSFM GIDLSQDGHS LVSYSQLAHW GQCSSWEGFK VSPFTAGSQT FSFESNPCEY
0901: FHQGKIKAST LSLSVLVAIE MFNSLNALSE DGSLVTMPPW VNPWLLLAMA VSFGLHFVIL YVPFLAQVFG IVPLSLNEWL LVLAVSLPVI LIDEVLKFVG
1001: RLTSGYRYSP RTPSAKQKTE

Best Arabidopsis Sequence Match ( AT1G07670.1 )
(BLAST)

0001: MGKGGEDCGN KQTNSSELVK SDTFPAWGKD VSECEEKFGV SREKGLSTDE VLKRHQIYGL NELEKPEGTS IFKLILEQFN DTLVRILLAA AVISFVLAFF
0101: DGDEGGEMGI TAFVEPLVIF LILIVNAIVG IWQETNAEKA LEALKEIQSQ QATVMRDGTK VSSLPAKELV PGDIVELRVG DKVPADMRVV ALISSTLRVE
0201: QGSLTGESEA VSKTTKHVDE NADIQGKKCM VFAGTTVVNG NCICLVTDTG MNTEIGRVHS QIQEAAQHEE DTPLKKKLNE FGEVLTMIIG LICALVWLIN
0301: VKYFLSWEYV DGWPRNFKFS FEKCTYYFEI AVALAVAAIP EGLPAVITTC LALGTRKMAQ KNALVRKLPS VETLGCTTVI CSDKTGTLTT NQMAVSKLVA
0401: MGSRIGTLRS FNVEGTSFDP RDGKIEDWPT GRMDANLQMI AKIAAICNDA NVEKSDQQFV SRGMPTEAAL KVLVEKMGFP EGLNEASSDG NVLRCCRLWS
0501: ELEQRIATLE FDRDRKSMGV MVDSSSGKKL LLVKGAVENV LERSTHIQLL DGSTRELDQY SRDLILQSLH DMSLSALRCL GFAYSDVPSD FATYDGSEDH
0601: PAHQQLLNPS NYSSIESNLV FVGFVGLRDP PRKEVRQAIA DCRTAGIRVM VITGDNKSTA EAICREIGVF EADEDISSRS LTGKEFMDVK DQKNHLRQTG
0701: GLLFSRAEPK HKQEIVRLLK EDGEVVAMTG DGVNDAPALK LADIGVAMGI SGTEVAKEAS DLVLADDNFS TIVAAVGEGR SIYNNMKAFI RYMISSNIGE
0801: VASIFLTAAL GIPEGMIPVQ LLWVNLVTDG PPATALGFNP PDKDIMKKPP RRSDDSLITA WILFRYMVIG LYVGVATVGV FIIWYTHNSF MGIDLSQDGH
0901: SLVSYSQLAH WGQCSSWEGF KVSPFTAGSQ TFSFDSNPCD YFQQGKIKAS TLSLSVLVAI EMFNSLNALS EDGSLVTMPP WVNPWLLLAM AVSFGLHFVI
1001: LYVPFLAQVF GIVPLSLNEW LLVLAVSLPV ILIDEVLKFV GRCTSGYRYS PRTPSAKQKE E

Arabidopsis Description

ECA4Calcium-transporting ATPase 4, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:Q9XES1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.