CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
peroxisome 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61305	Canola	cytosol	42.49	58.11
CDY09907	Canola	plasma membrane	88.44	57.86
CDY06268	Canola	plasma membrane	88.29	57.65
CDY35928	Canola	plasma membrane	90.09	57.58
AT1G07670.2	Thale cress	plasma membrane	88.29	55.42
AT1G07810.1	Thale cress	plasma membrane	87.24	54.76
CDY28053	Canola	plasma membrane	89.04	54.5
Os03t0281600-01	Rice	plasma membrane	67.72	53.37
CDY22720	Canola	peroxisome, plasma membrane	80.48	53.23
Bra029645.1-P	Field mustard	plasma membrane, plastid	92.34	51.51
VIT_06s0004g03900.t01	Wine grape	plasma membrane	74.92	47.03
KRG95874	Soybean	endoplasmic reticulum	72.97	45.85
PGSC0003DMT400040184	Potato	plasma membrane	72.37	45.43
Solyc11g072880.1.1	Tomato	nucleus, plastid, unclear	72.22	45.33
KRH67591	Soybean	endoplasmic reticulum	71.62	45.0
EER92445	Sorghum	plasma membrane	68.47	42.98
Zm00001d047769_P001	Maize	plasma membrane	68.32	42.84
Zm00001d028687_P001	Maize	extracellular, mitochondrion	67.87	42.6
GSMUA_Achr2P16100_001	Banana	plasma membrane	57.51	42.09
TraesCS4A01G103000.2	Wheat	unclear	66.97	42.0
TraesCS4B01G201500.2	Wheat	golgi	66.82	41.9
TraesCS4D01G202200.2	Wheat	plasma membrane	66.82	41.9
TraesCS1A01G047000.1	Wheat	plasma membrane	65.17	41.06
HORVU1Hr1G007310.1	Barley	plasma membrane	64.56	40.99
HORVU4Hr1G058210.4	Barley	plastid	66.52	40.9
TraesCS1D01G047900.1	Wheat	plasma membrane	64.71	40.89
TraesCS1B01G060700.1	Wheat	golgi	64.71	40.78
EES18919	Sorghum	plasma membrane	63.66	40.08
Zm00001d011013_P001	Maize	plasma membrane	62.76	39.73
GSMUA_Achr10P...	Banana	plasma membrane	51.2	38.23
GSMUA_Achr6P15410_001	Banana	plasma membrane	49.25	36.65
GSMUA_Achr3P17740_001	Banana	plasma membrane	55.71	36.41
CDY07153	Canola	plasma membrane	55.26	34.91
CDY51719	Canola	plasma membrane	54.95	34.72
CDY65296	Canola	cytosol	3.3	33.33
CDY53835	Canola	nucleus, plasma membrane, plastid	13.21	28.57
CDY22604	Canola	plasma membrane	40.09	26.75
CDX94924	Canola	plasma membrane	26.43	21.23
CDX93457	Canola	cytosol, nucleus, plasma membrane	31.38	17.34
CDY14779	Canola	plasma membrane	25.23	16.92
CDX72049	Canola	plasma membrane	25.68	16.68
CDY06114	Canola	plasma membrane	25.68	16.68
CDY06915	Canola	plasma membrane	25.83	16.67
CDX67686	Canola	cytosol, peroxisome, plasma membrane, plastid	25.08	16.29
CDY22420	Canola	plasma membrane	24.62	16.14
CDY11764	Canola	plasma membrane	24.62	16.13
CDX90109	Canola	plasma membrane	24.62	16.13
CDY49443	Canola	plasma membrane	24.47	16.07
CDY33829	Canola	plasma membrane	24.62	16.0
CDY44033	Canola	plasma membrane	24.47	16.0
CDX72644	Canola	plasma membrane	24.32	15.98
CDY29571	Canola	plasma membrane	24.32	15.98
CDX76883	Canola	plasma membrane	24.32	15.98
CDY37311	Canola	plasma membrane	25.53	15.58
CDY27537	Canola	plasma membrane	25.53	15.57
CDY32412	Canola	plasma membrane	25.38	15.5
CDX82212	Canola	plasma membrane	25.38	15.5
CDX93910	Canola	plasma membrane	24.02	15.49
CDY10680	Canola	plasma membrane	23.42	15.38
CDY19575	Canola	plasma membrane	25.08	15.25
CDY50072	Canola	plasma membrane	25.08	15.25
CDY38264	Canola	plasma membrane	24.32	15.1
CDY20693	Canola	cytosol	24.17	15.05
CDY40822	Canola	plasma membrane	22.67	14.86
CDY34219	Canola	plasma membrane	22.67	14.85
CDY10319	Canola	plasma membrane	22.82	14.83
CDY46716	Canola	cytosol	23.12	14.35
CDY32902	Canola	plasma membrane	24.17	14.35
CDX68595	Canola	plasma membrane	22.37	14.08
CDY43534	Canola	cytosol	22.37	14.06
CDY30184	Canola	plasma membrane	22.37	14.03
CDY53981	Canola	cytosol	24.32	13.99
CDY38720	Canola	plasma membrane	19.97	13.96
CDY38719	Canola	plasma membrane	18.77	13.08
CDX94386	Canola	cytosol	20.57	13.02
CDX89375	Canola	plasma membrane	20.12	13.0
CDX94389	Canola	plasma membrane	19.97	12.98
CDY19574	Canola	plasma membrane	10.51	11.63
CDY06279	Canola	plasma membrane	3.0	5.33
CDX89371	Canola	plasma membrane	2.1	4.17
Os05t0120700-01	Rice	plasma membrane	0.9	2.14
CDY65295	Canola	cytosol	0.45	1.13
CDX95122	Canola	cytosol, plasma membrane, vacuole	0.0	0.0
CDX95120	Canola	mitochondrion	0.0	0.0
CDY70305	Canola	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	GO:A0A078JLS2
UniProt:A0A078JLS2	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlants:CDY68458
ProteinID:CDY68458	ProteinID:CDY68458.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00074254001
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	PFAM:PF00122	PFAM:PF00690
PFAM:PF00702	PFAM:PF13246	PRINTS:PR00119	PANTHER:PTHR42861	PANTHER:PTHR42861:SF4	InterPro:P_typ_ATPase
SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494
TMHMM:TMhelix	UniParc:UPI0004EF2FE5	SEG:seg	:	:	:

Description

BnaAnng27350DBnaAnng27350D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JLS2]

Coordinates

chrLK037366:+:3240..5826

Molecular Weight (calculated)

72902.0 Da

IEP (calculated)

4.928

GRAVY (calculated)

-0.015

Length

666 amino acids

Sequence
(BLAST)

001: MGKGGEDKQS NGSEPLKLDT FPAWGKDVRE CEEHFGVSVE RGLSSSEVLT RHQIYGLNEL EKPEGTSLLK LILEQFNDTL VRILLAAAVV SFVLAFVDGD
101: EGGEMGITAF VEPLVIFLIL IVNAIVGIWQ ETNAEKALEA LKEIQSQQAT VTRDGVKVSC LPAKELVPGD VVELRVGDKV PADMRVVGLV SSTLRVEQGS
201: LTGESEAVSK TTKAVEENAD IQGKKCMVFA GTTVVNGNCV CLVTHTGMST EIGRVHSQIQ EAAQHEEDTP LKKKLNEFGE ALTMIIGLIC ALVWLINVKY
301: FLSWEYVDGW PRNFKFSFEK CTYYFEIAVA LAVAAIPEGL PAVITTCLAL GTRKMAQKNA LVRKLPKLGL FGLLMLRGLL LIHEMGRLKI GLWMIAKIAA
401: ICNDADVEKS ENQFVARGMP TEAALKVLVE KMGFPEGADK ASSLADGNVL GCCRLWSELE QRIATLEFDR DRKSMGVMVD SSSGTKLLLV KGAVENVLER
501: STHIQLLDGS TQELDQYSRD LILQSLHDMS MSALRCLGFA YSDVPSDFAT YDGSEDHPAH QQLLNPSNYS SIESNLTFVG FVGLRDPPRK EVRQAIADCR
601: TAGIRVMVIT GDNKSTAEAI CREIGVFEAD EDISSRSLTG KEFMDVKDQK NHLRQSGGIL FSRAEP

Best Arabidopsis Sequence Match ( AT1G07670.1 )
(BLAST)

0001: MGKGGEDCGN KQTNSSELVK SDTFPAWGKD VSECEEKFGV SREKGLSTDE VLKRHQIYGL NELEKPEGTS IFKLILEQFN DTLVRILLAA AVISFVLAFF
0101: DGDEGGEMGI TAFVEPLVIF LILIVNAIVG IWQETNAEKA LEALKEIQSQ QATVMRDGTK VSSLPAKELV PGDIVELRVG DKVPADMRVV ALISSTLRVE
0201: QGSLTGESEA VSKTTKHVDE NADIQGKKCM VFAGTTVVNG NCICLVTDTG MNTEIGRVHS QIQEAAQHEE DTPLKKKLNE FGEVLTMIIG LICALVWLIN
0301: VKYFLSWEYV DGWPRNFKFS FEKCTYYFEI AVALAVAAIP EGLPAVITTC LALGTRKMAQ KNALVRKLPS VETLGCTTVI CSDKTGTLTT NQMAVSKLVA
0401: MGSRIGTLRS FNVEGTSFDP RDGKIEDWPT GRMDANLQMI AKIAAICNDA NVEKSDQQFV SRGMPTEAAL KVLVEKMGFP EGLNEASSDG NVLRCCRLWS
0501: ELEQRIATLE FDRDRKSMGV MVDSSSGKKL LLVKGAVENV LERSTHIQLL DGSTRELDQY SRDLILQSLH DMSLSALRCL GFAYSDVPSD FATYDGSEDH
0601: PAHQQLLNPS NYSSIESNLV FVGFVGLRDP PRKEVRQAIA DCRTAGIRVM VITGDNKSTA EAICREIGVF EADEDISSRS LTGKEFMDVK DQKNHLRQTG
0701: GLLFSRAEPK HKQEIVRLLK EDGEVVAMTG DGVNDAPALK LADIGVAMGI SGTEVAKEAS DLVLADDNFS TIVAAVGEGR SIYNNMKAFI RYMISSNIGE
0801: VASIFLTAAL GIPEGMIPVQ LLWVNLVTDG PPATALGFNP PDKDIMKKPP RRSDDSLITA WILFRYMVIG LYVGVATVGV FIIWYTHNSF MGIDLSQDGH
0901: SLVSYSQLAH WGQCSSWEGF KVSPFTAGSQ TFSFDSNPCD YFQQGKIKAS TLSLSVLVAI EMFNSLNALS EDGSLVTMPP WVNPWLLLAM AVSFGLHFVI
1001: LYVPFLAQVF GIVPLSLNEW LLVLAVSLPV ILIDEVLKFV GRCTSGYRYS PRTPSAKQKE E

Arabidopsis Description

ECA4Calcium-transporting ATPase 4, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:Q9XES1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.