CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plasma membrane

Predictor Summary:

cytosol 1
peroxisome 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06279	Canola	plasma membrane	36.94	99.2
CDX95122	Canola	cytosol, plasma membrane, vacuole	28.6	94.12
CDY09907	Canola	plasma membrane	90.27	89.29
CDY06268	Canola	plasma membrane	90.37	89.22
CDY35928	Canola	plasma membrane	88.68	85.7
AT1G07670.2	Thale cress	plasma membrane	89.97	85.39
CDY28053	Canola	plasma membrane	91.66	84.83
AT1G07810.1	Thale cress	plasma membrane	89.18	84.64
Os05t0120700-01	Rice	plasma membrane	22.84	81.85
CDY68458	Canola	cytosol, peroxisome, plasma membrane	53.23	80.48
VIT_06s0004g03900.t01	Wine grape	plasma membrane	77.95	73.99
KRG95874	Soybean	endoplasmic reticulum	76.07	72.26
PGSC0003DMT400040184	Potato	plasma membrane	75.77	71.91
Solyc11g072880.1.1	Tomato	nucleus, plastid, unclear	75.67	71.82
KRH67591	Soybean	endoplasmic reticulum	74.98	71.23
Zm00001d047769_P001	Maize	plasma membrane	74.58	70.72
EER92445	Sorghum	plasma membrane	74.48	70.69
Zm00001d028687_P001	Maize	extracellular, mitochondrion	74.38	70.59
GSMUA_Achr6P15410_001	Banana	plasma membrane	62.66	70.5
GSMUA_Achr2P16100_001	Banana	plasma membrane	63.65	70.44
TraesCS4A01G103000.2	Wheat	unclear	72.79	69.02
TraesCS4B01G201500.2	Wheat	golgi	72.69	68.93
TraesCS4D01G202200.2	Wheat	plasma membrane	72.59	68.83
HORVU1Hr1G007310.1	Barley	plasma membrane	71.6	68.73
TraesCS1D01G047900.1	Wheat	plasma membrane	71.8	68.6
TraesCS1B01G060700.1	Wheat	golgi	71.9	68.5
TraesCS1A01G047000.1	Wheat	plasma membrane	71.8	68.4
Os03t0281600-01	Rice	plasma membrane	56.5	67.34
EES18919	Sorghum	plasma membrane	70.21	66.82
CDY61305	Canola	cytosol	32.17	66.53
Zm00001d011013_P001	Maize	plasma membrane	69.41	66.44
GSMUA_Achr10P...	Banana	plasma membrane	58.09	65.58
GSMUA_Achr3P17740_001	Banana	plasma membrane	66.34	65.55
HORVU4Hr1G058210.4	Barley	plastid	70.31	65.37
CDY07153	Canola	plasma membrane	63.26	60.44
CDY51719	Canola	plasma membrane	63.26	60.44
CDY70305	Canola	plasma membrane	12.02	49.19
CDY53835	Canola	nucleus, plasma membrane, plastid	14.4	47.08
CDY22604	Canola	plasma membrane	45.78	46.19
CDX94924	Canola	plasma membrane	37.24	45.24
CDX93457	Canola	cytosol, nucleus, plasma membrane	40.32	33.69
CDY65296	Canola	cytosol	2.18	33.33
CDY19574	Canola	plasma membrane	18.17	30.4
CDY14779	Canola	plasma membrane	27.61	28.0
CDY06915	Canola	plasma membrane	27.71	27.03
CDX72049	Canola	plasma membrane	27.31	26.83
CDY65295	Canola	cytosol	7.05	26.79
CDY06114	Canola	plasma membrane	27.21	26.73
CDX90109	Canola	plasma membrane	26.91	26.65
CDY11764	Canola	plasma membrane	26.81	26.55
CDX67686	Canola	cytosol, peroxisome, plasma membrane, plastid	27.01	26.54
CDY49443	Canola	plasma membrane	26.61	26.43
CDX76883	Canola	plasma membrane	26.61	26.43
CDY22420	Canola	plasma membrane	26.61	26.38
CDY33829	Canola	plasma membrane	26.81	26.34
CDY44033	Canola	plasma membrane	26.61	26.3
CDX72644	Canola	plasma membrane	26.42	26.23
CDY29571	Canola	plasma membrane	26.42	26.23
CDX89371	Canola	plasma membrane	8.74	26.19
CDY10680	Canola	plasma membrane	26.22	26.04
CDX93910	Canola	plasma membrane	26.61	25.94
CDY32412	Canola	plasma membrane	27.71	25.6
CDX82212	Canola	plasma membrane	27.71	25.6
CDY40822	Canola	plasma membrane	25.82	25.59
CDY10319	Canola	plasma membrane	26.02	25.56
CDY27537	Canola	plasma membrane	27.71	25.55
CDY37311	Canola	plasma membrane	27.61	25.48
CDY34219	Canola	plasma membrane	25.72	25.47
CDY50072	Canola	plasma membrane	27.51	25.3
CDY38264	Canola	plasma membrane	26.81	25.16
CDY19575	Canola	plasma membrane	27.31	25.11
CDY20693	Canola	cytosol	26.51	24.95
CDY32902	Canola	plasma membrane	26.81	24.06
CDY46716	Canola	cytosol	25.42	23.86
CDY43534	Canola	cytosol	25.02	23.77
CDX68595	Canola	plasma membrane	24.93	23.72
CDY30184	Canola	plasma membrane	24.93	23.63
CDY53981	Canola	cytosol	26.71	23.23
CDY38720	Canola	plasma membrane	20.36	21.51
CDX89375	Canola	plasma membrane	21.25	20.76
CDX94389	Canola	plasma membrane	20.95	20.59
CDY38719	Canola	plasma membrane	19.36	20.4
CDX94386	Canola	cytosol	20.95	20.06
CDX95120	Canola	mitochondrion	1.09	7.64

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	GO:A0A078G8E0
UniProt:A0A078G8E0	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlants:CDY22720	ProteinID:CDY22720	ProteinID:CDY22720.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00019393001	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299
PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00121
ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF4	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TMHMM:TMhelix	UniParc:UPI0004EE699B
SEG:seg	:	:	:	:	:

Description

BnaC08g43540DBnaC08g43540D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078G8E0]

Coordinates

chrLK032134:-:635733..640131

Molecular Weight (calculated)

109369.0 Da

IEP (calculated)

4.800

GRAVY (calculated)

0.138

Length

1007 amino acids

Sequence
(BLAST)

0001: EEKYLERSVA ISDSVTDLMG KGGEEDLGNK QSNGSEPVER GLSRGEVLTR HQIYGLNELE KPEGTSLLKL ILEQFNDTLV RILLAAAVVS FVLAFVDGDE
0101: GGEMGITAFV EPLVIFLILI VNAIVGIWQE TNAEKALEAL KEIQSQQATV MRDGVKVSCL PAKELVPGDV VELRVGDKVP ADMRVVGLVS STLRVEQGSL
0201: TGESEAKCIV FAGTTVVNGS CVCLVTHTGM STEIGRVHSQ IQEASQHEED TPLKKKLNEF GEALTMIIGL ICALIAVALA VAAIPEGLPA VITTCLALGT
0301: RKMAQKNALV RKLPSVETLG CTTVICSDKT GTLTTNQMAV SKLVAMDWPV GRMDTNLQMI AKIAAICNDA DVEKSENQFA ALKVLVEKMG FPEGANKASS
0401: LADGDVLRCC RLWSELEQRI ATLEFDRDRK SMGVMVDSSS GKKLLLVKGA VENVLERSTH IQLLDGSTQE LDQYSRDLIL QSLHDMSMSA LRCLGFAYSD
0501: VPSDFATYDG SEDHPAHQQL LNPSNYSSIE SNLTFVGFVG LRDPPRKEVR QAIADCRTAG IRVMVITGDN KSTAEAICRE IGVFEADEDI SSRSLTGKEF
0601: MDVKDQKNHL RQSGGLLFSR AEPKHKQEIV RLLKEDGEVV AMTGDGVNDA PALKLADIGV AMGISGTEVA KEASDMVLAD DNFSTIVAAV GEGRSIYNNM
0701: KAFIRYMISS NIGEVASIFL TAALGIPEGM IPVQLLWVNL VTDGPPATAL GFNPPDKDIM KKPPRRSDDS LITAWILFRY LVIGMYVGVA TVGVFIIWYT
0801: HSSFMGIDLS QDGHSLVSYS QLAHWGQCSS WEGFKVSPFT AGSQTFSFES NPCEYFHLGK IKASTLSLSV LVAIEMFNSL NALSEDGSLV TMPPWVNPWL
0901: LLAMAVSFGL HFVILYVPFL AQVFGIVPLS LNEWLLVLAV SLPVILIDEV LKFVGRLTSG YRYSPRTPSA KQKTDSLTSV LIQYTKTVQV KVTVSVMINE
1001: ICSEFVT

Best Arabidopsis Sequence Match ( AT1G07670.1 )
(BLAST)

0001: MGKGGEDCGN KQTNSSELVK SDTFPAWGKD VSECEEKFGV SREKGLSTDE VLKRHQIYGL NELEKPEGTS IFKLILEQFN DTLVRILLAA AVISFVLAFF
0101: DGDEGGEMGI TAFVEPLVIF LILIVNAIVG IWQETNAEKA LEALKEIQSQ QATVMRDGTK VSSLPAKELV PGDIVELRVG DKVPADMRVV ALISSTLRVE
0201: QGSLTGESEA VSKTTKHVDE NADIQGKKCM VFAGTTVVNG NCICLVTDTG MNTEIGRVHS QIQEAAQHEE DTPLKKKLNE FGEVLTMIIG LICALVWLIN
0301: VKYFLSWEYV DGWPRNFKFS FEKCTYYFEI AVALAVAAIP EGLPAVITTC LALGTRKMAQ KNALVRKLPS VETLGCTTVI CSDKTGTLTT NQMAVSKLVA
0401: MGSRIGTLRS FNVEGTSFDP RDGKIEDWPT GRMDANLQMI AKIAAICNDA NVEKSDQQFV SRGMPTEAAL KVLVEKMGFP EGLNEASSDG NVLRCCRLWS
0501: ELEQRIATLE FDRDRKSMGV MVDSSSGKKL LLVKGAVENV LERSTHIQLL DGSTRELDQY SRDLILQSLH DMSLSALRCL GFAYSDVPSD FATYDGSEDH
0601: PAHQQLLNPS NYSSIESNLV FVGFVGLRDP PRKEVRQAIA DCRTAGIRVM VITGDNKSTA EAICREIGVF EADEDISSRS LTGKEFMDVK DQKNHLRQTG
0701: GLLFSRAEPK HKQEIVRLLK EDGEVVAMTG DGVNDAPALK LADIGVAMGI SGTEVAKEAS DLVLADDNFS TIVAAVGEGR SIYNNMKAFI RYMISSNIGE
0801: VASIFLTAAL GIPEGMIPVQ LLWVNLVTDG PPATALGFNP PDKDIMKKPP RRSDDSLITA WILFRYMVIG LYVGVATVGV FIIWYTHNSF MGIDLSQDGH
0901: SLVSYSQLAH WGQCSSWEGF KVSPFTAGSQ TFSFDSNPCD YFQQGKIKAS TLSLSVLVAI EMFNSLNALS EDGSLVTMPP WVNPWLLLAM AVSFGLHFVI
1001: LYVPFLAQVF GIVPLSLNEW LLVLAVSLPV ILIDEVLKFV GRCTSGYRYS PRTPSAKQKE E

Arabidopsis Description

ECA4Calcium-transporting ATPase 4, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:Q9XES1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.