CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
peroxisome 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65296	Canola	cytosol	6.34	98.48
CDX89375	Canola	plasma membrane	95.71	95.15
CDY65295	Canola	cytosol	24.39	94.34
CDX89371	Canola	plasma membrane	26.93	82.14
CDX94386	Canola	cytosol	78.05	76.05
CDY19574	Canola	plasma membrane	27.9	47.51
CDX68595	Canola	plasma membrane	47.8	46.31
CDY38720	Canola	plasma membrane	43.02	46.27
CDY30184	Canola	plasma membrane	47.71	46.05
CDY20693	Canola	cytosol	48.0	45.98
CDY46716	Canola	cytosol	48.0	45.85
CDY43534	Canola	cytosol	47.41	45.85
CDY38264	Canola	plasma membrane	47.8	45.67
CDY38719	Canola	plasma membrane	41.76	44.77
CDY32902	Canola	plasma membrane	47.9	43.76
CDY37311	Canola	plasma membrane	46.44	43.63
CDY27537	Canola	plasma membrane	46.24	43.41
CDX82212	Canola	plasma membrane	46.05	43.3
CDY32412	Canola	plasma membrane	46.05	43.3
CDY50072	Canola	plasma membrane	46.24	43.29
CDY19575	Canola	plasma membrane	46.15	43.2
CDY53981	Canola	cytosol	47.8	42.31
CDY40822	Canola	plasma membrane	38.93	39.27
CDY34219	Canola	plasma membrane	38.73	39.04
CDY10680	Canola	plasma membrane	38.15	38.56
CDY10319	Canola	plasma membrane	38.05	38.05
CDY49443	Canola	plasma membrane	36.98	37.38
CDX72644	Canola	plasma membrane	36.88	37.28
CDX76883	Canola	plasma membrane	36.78	37.18
CDY22420	Canola	plasma membrane	36.78	37.11
CDY44033	Canola	plasma membrane	36.88	37.1
CDY29571	Canola	plasma membrane	36.68	37.08
CDX93910	Canola	plasma membrane	37.37	37.08
CDY14779	Canola	plasma membrane	35.61	36.76
CDX90109	Canola	plasma membrane	36.2	36.48
CDY11764	Canola	plasma membrane	36.2	36.48
CDY06915	Canola	plasma membrane	36.0	35.76
CDY06114	Canola	plasma membrane	35.41	35.41
CDX72049	Canola	plasma membrane	35.22	35.22
CDX67686	Canola	cytosol, peroxisome, plasma membrane, plastid	35.12	35.12
CDY33829	Canola	plasma membrane	35.12	35.12
CDY53835	Canola	nucleus, plasma membrane, plastid	8.1	26.95
CDX94924	Canola	plasma membrane	19.12	23.64
CDY22604	Canola	plasma membrane	22.34	22.95
CDY06279	Canola	plasma membrane	8.1	22.13
CDY07153	Canola	plasma membrane	22.24	21.63
CDY51719	Canola	plasma membrane	22.15	21.54
CDY06268	Canola	plasma membrane	21.37	21.47
CDY09907	Canola	plasma membrane	21.17	21.32
CDY22720	Canola	peroxisome, plasma membrane	20.59	20.95
CDY28053	Canola	plasma membrane	21.46	20.22
CDY68458	Canola	cytosol, peroxisome, plasma membrane	12.98	19.97
CDY35928	Canola	plasma membrane	20.29	19.96
CDX95122	Canola	cytosol, plasma membrane, vacuole	5.95	19.93
CDY70305	Canola	plasma membrane	4.59	19.11
CDY61305	Canola	cytosol	8.98	18.89
CDX93457	Canola	cytosol, nucleus, plasma membrane	21.27	18.09
CDX95120	Canola	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	GO:A0A078E170
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlants:CDX94389
ProteinID:CDX94389	ProteinID:CDX94389.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00157519001	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
InterPro:IPR023299	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF00702	PFAM:PF13246
PRINTS:PR00119	PRINTS:PR00120	PANTHER:PTHR24093	PANTHER:PTHR24093:SF368	InterPro:P_typ_ATPase	SMART:SM00831
SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TMHMM:TMhelix
UniParc:UPI0004EE4AE3	SEG:seg	:	:	:	:

Description

BnaC01g17950D

Coordinates

chrLK031881:-:757386..766016

Molecular Weight (calculated)

113832.0 Da

IEP (calculated)

7.207

GRAVY (calculated)

0.116

Length

1025 amino acids

Sequence
(BLAST)

0001: MKSPQRSSDD LEAGGDAPKS RNHSRRRGRG IFVAVDASIR FKSAMGCEKE IELGSHDQPT AKDVKLSQLE EQPVQVEIEL PASYPDEFGI RLEELVSISC
0101: DGGLSVLKRF DGVSGLSPLL HTDLDKGICG THEDIRRRRN KFGSNEYPLK KERNFWMFLG EASRSFTLIV LVLAALASLL LQIKTKTISH EWYDEAGIIV
0201: AVILVIFVTA ISNYNQSLQF EKLNDEKRNI CIEVTRNGRL VEVPIYDVPA DGVLVSGYSL QIGEYETMGT NRTVHKDTDI DPILISGSKV EDGIGRMLVT
0301: SVGMNTQWRM PMACIPLYTG EETPLQVHLN RVVIAFGLIS ISVALVVFLI ESCLCFMGRI KNTDGSPMFD AGKTTLDEKI DMVIKFIILG VTIIVVAVPE
0401: GLPLAVTLNI AYMTRKLLGE KVLVQKLSAC EAMGSATTIV CHKTGILTLN QAICYLSSFF SQHTYFQSQM EVVDVCAGRV RTHNLDTMSE LSPLQISLIA
0501: EGIALNTNGS VYHPEGQSEP EVFGSATERA ILNFGVKLGM NFDEIKSKST IFRVSPFNSR RKRRGVAVQL HDSQVRVHWK GAAKTILASC QWYMDKDNIA
0601: AMDQERIFHF EKIIDEMSKE GLRCAALAYR NFTDGDIPES NLVLLAIIGI KDSCRPGISR AIQQCRNAGV KVCMVTGDDL LTAKAIAMQC GILRGTLDEP
0701: ANTAILASEF ASMSEADREE IAENIVVMGR SSPDENLLLL EALRKKGHVV AATGKGIRDA PSLRQANISL AMGIGGTAIV KECSDIIILE DNFTSIVKVI
0801: QWGRFLYTNA QRFLQFRLTL NASALIICVV VAVHSHEIPL NVAQLLWINL LTFTFGAWAL ASEPPMDNLM RRPPVRKGEP FITKLMWAKF VAQVSFQVSA
0901: LLYLNFRGES ILKLENKSLD QANKVKNTVI FNCFVFCQVF NEVECRTSYQ GNTFSGILKN HLFLGTILLN VILQIIVIEC LGIFFYTARL NLKQWLISIG
1001: IGFFSQVIGR FPFQAFPYLR NEDHI

Best Arabidopsis Sequence Match ( AT4G29900.1 )
(BLAST)

0001: MSGQFNNSPR GEDKDVEAGT SSFTEYEDSP FDIASTKNAP VERLRRWRQA ALVLNASRRF RYTLDLKREE DKKQMLRKMR AHAQAIRAAH LFKAAASRVT
0101: GIASPLPTPG GGDFGIGQEQ IVSISRDQNI GALQELGGVR GLSDLLKTNL EKGIHGDDDD ILKRKSAFGS NTYPQKKGRS FWRFVWEASQ DLTLIILIVA
0201: AVASLALGIK TEGIEKGWYD GISIAFAVLL VIVVTATSDY RQSLQFQNLN EEKRNIRLEV TRDGRRVEIS IYDIVVGDVI PLNIGDQVPA DGVLVAGHSL
0301: AVDESSMTGE SKIVQKNSTK HPFLMSGCKV ADGNGTMLVT GVGVNTEWGL LMASVSEDNG GETPLQVRLN GVATFIGIVG LTVAGVVLFV LVVRYFTGHT
0401: KNEQGGPQFI GGKTKFEHVL DDLVEIFTVA VTIVVVAVPE GLPLAVTLTL AYSMRKMMAD KALVRRLSAC ETMGSATTIC SDKTGTLTLN EMTVVECYAG
0501: LQKMDSPDSS SKLPSAFTSI LVEGIAHNTT GSVFRSESGE IQVSGSPTER AILNWAIKLG MDFDALKSES SAVQFFPFNS EKKRGGVAVK SPDSSVHIHW
0601: KGAAEIVLGS CTHYMDESES FVDMSEDKMG GLKDAIDDMA ARSLRCVAIA FRTFEADKIP TDEEQLSRWE LPEDDLILLA IVGIKDPCRP GVKNSVLLCQ
0701: QAGVKVRMVT GDNIQTAKAI ALECGILASD SDASEPNLIE GKVFRSYSEE ERDRICEEIS VMGRSSPNDK LLLVQSLKRR GHVVAVTGDG TNDAPALHEA
0801: DIGLAMGIQG TEVAKEKSDI IILDDNFESV VKVVRWGRSV YANIQKFIQF QLTVNVAALV INVVAAISAG EVPLTAVQLL WVNLIMDTLG ALALATEPPT
0901: DHLMDRAPVG RREPLITNIM WRNLFIQAMY QVTVLLILNF RGISILHLKS KPNAERVKNT VIFNAFVICQ VFNEFNARKP DEINIFRGVL RNHLFVGIIS
1001: ITIVLQVVIV EFLGTFASTT KLDWEMWLVC IGIGSISWPL AVIGKLIPVP ETPVSQYFRI NRWRRNSSG

Arabidopsis Description

ACA10Calcium-transporting ATPase 10, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9SZR1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.