CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX70995
CDX88803
CDX90890
CDX92368
CDY09128
CDY17950
CDY21953
CDY22119
CDY35676

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G37640.1	CDX90890	AT4G03290.1	21798944
AT4G37640.1	CDY17950	AT4G03290.1	21798944
AT4G37640.1	CDY21953	AT4G03290.1	21798944
AT4G37640.1	CDY22119	AT4G03290.1	21798944
AT4G37640.1	CDX70995	AT5G22290.1	21798944
AT4G37640.1	CDX88803	AT5G22290.1	21798944
AT4G37640.1	CDX92368	AT5G22290.1	21798944
AT4G37640.1	CDY09128	AT5G22290.1	21798944
AT4G37640.1	CDY35676	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017841.1-P	Field mustard	plasma membrane	99.9	99.9
CDX72644	Canola	plasma membrane	99.41	99.41
AT4G37640.1	Thale cress	plasma membrane	96.55	96.55
CDY22420	Canola	plasma membrane	96.35	96.16
CDY44033	Canola	plasma membrane	96.35	95.88
CDY49443	Canola	plasma membrane	93.49	93.49
CDX76883	Canola	plasma membrane	93.2	93.2
Solyc02g092450.2.1	Tomato	nucleus, unclear	82.74	82.5
KRH28359	Soybean	cytosol, peroxisome, plasma membrane	82.64	82.48
KRH77121	Soybean	cytosol, endoplasmic reticulum, peroxisome	82.45	82.45
VIT_07s0129g00180.t01	Wine grape	plasma membrane	82.84	82.43
PGSC0003DMT400055192	Potato	plasma membrane	82.35	82.1
PGSC0003DMT400033890	Potato	cytosol, peroxisome, plasma membrane	82.35	82.1
Solyc02g064680.2.1	Tomato	nucleus, unclear	82.25	82.01
KRH58090	Soybean	cytosol	81.56	81.56
KRH04436	Soybean	cytosol, endoplasmic reticulum, plasma membrane	81.07	81.07
VIT_07s0129g00110.t01	Wine grape	plasma membrane	42.7	80.93
GSMUA_Achr6P16920_001	Banana	cytosol	61.44	80.91
GSMUA_Achr4P10940_001	Banana	cytosol	70.61	80.18
GSMUA_Achr4P32520_001	Banana	plasma membrane	64.99	79.69
CDX90109	Canola	plasma membrane	78.21	77.97
CDY11764	Canola	plasma membrane	78.11	77.88
Os12t0586600-01	Rice	plasma membrane	77.91	77.45
Zm00001d030893_P004	Maize	plasma membrane	76.82	76.37
KXG23838	Sorghum	plasma membrane	76.63	76.18
TraesCS5B01G075100.2	Wheat	plasma membrane	75.94	75.49
TraesCS5A01G068700.1	Wheat	plasma membrane	75.64	75.2
TraesCS5D01G080700.1	Wheat	plasma membrane	75.64	75.2
HORVU5Hr1G018160.3	Barley	cytosol	75.15	73.77
Os03t0616400-01	Rice	plastid	67.95	66.7
EER93815	Sorghum	plastid	67.46	66.21
TraesCS4D01G079200.1	Wheat	plasma membrane	68.15	65.81
HORVU4Hr1G013660.3	Barley	plasma membrane, plastid	68.05	65.71
Zm00001d033334_P001	Maize	plastid	66.77	65.47
TraesCS4B01G080300.1	Wheat	plastid	67.75	65.3
TraesCS4A01G234700.1	Wheat	plastid	67.55	65.11
CDY14779	Canola	plasma membrane	62.72	64.05
CDY06915	Canola	plasma membrane	64.2	63.08
CDY06114	Canola	plasma membrane	63.61	62.93
CDX72049	Canola	plasma membrane	63.51	62.83
CDX67686	Canola	cytosol, peroxisome, plasma membrane, plastid	63.02	62.34
CDY33829	Canola	plasma membrane	62.92	62.24
CDY19574	Canola	plasma membrane	28.99	48.84
CDY43534	Canola	cytosol	49.21	47.08
CDX68595	Canola	plasma membrane	49.01	46.98
CDX89371	Canola	plasma membrane	15.38	46.43
CDY46716	Canola	cytosol	49.11	46.41
CDY30184	Canola	plasma membrane	48.32	46.14
CDY20693	Canola	cytosol	48.62	46.07
CDY38264	Canola	plasma membrane	48.52	45.85
CDY32412	Canola	plasma membrane	49.21	45.78
CDY19575	Canola	plasma membrane	49.41	45.75
CDY50072	Canola	plasma membrane	49.31	45.66
CDX82212	Canola	plasma membrane	49.01	45.6
CDY37311	Canola	plasma membrane	49.01	45.55
CDY27537	Canola	plasma membrane	48.92	45.42
GSMUA_Achr3P30070_001	Banana	cytosol, nucleus, plasma membrane	71.7	44.99
CDY10680	Canola	plasma membrane	43.89	43.89
CDY32902	Canola	plasma membrane	48.52	43.85
CDY40822	Canola	plasma membrane	43.89	43.8
CDY34219	Canola	plasma membrane	43.89	43.76
CDX93910	Canola	plasma membrane	44.28	43.47
CDY10319	Canola	plasma membrane	43.59	43.12
CDY53981	Canola	cytosol	48.62	42.57
CDY65295	Canola	cytosol	10.65	40.75
CDX94386	Canola	cytosol	38.86	37.45
CDX89375	Canola	plasma membrane	37.48	36.86
CDX94389	Canola	plasma membrane	37.08	36.68
CDY65296	Canola	cytosol	2.37	36.36
CDY38720	Canola	plasma membrane	31.95	34.0
CDY38719	Canola	plasma membrane	31.26	33.16
CDY53835	Canola	nucleus, plasma membrane, plastid	9.96	32.79
CDY22604	Canola	plasma membrane	26.73	27.15
CDY06279	Canola	plasma membrane	9.96	26.93
CDX94924	Canola	plasma membrane	21.79	26.66
CDY51719	Canola	plasma membrane	27.61	26.57
CDY22720	Canola	peroxisome, plasma membrane	26.23	26.42
CDY07153	Canola	plasma membrane	27.42	26.38
CDY06268	Canola	plasma membrane	26.43	26.27
CDY09907	Canola	plasma membrane	26.33	26.23
CDY28053	Canola	plasma membrane	27.12	25.28
CDY35928	Canola	plasma membrane	25.54	24.86
CDY68458	Canola	cytosol, peroxisome, plasma membrane	15.98	24.32
CDX95122	Canola	cytosol, plasma membrane, vacuole	7.2	23.86
CDY61305	Canola	cytosol	10.85	22.59
CDX93457	Canola	cytosol, nucleus, plasma membrane	24.65	20.75
CDY70305	Canola	plasma membrane	4.64	19.11
CDX95120	Canola	mitochondrion	0.1	0.69

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	GO:A0A078GVP1
UniProt:A0A078GVP1	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlants:CDY29571	ProteinID:CDY29571	ProteinID:CDY29571.1	InterPro:Ca_ATPase_N_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005515
GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006816
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0070588	GO:GO:0099132
EnsemblPlantsGene:GSBRNA2T00043295001	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	InterPro:P-type_ATPase_IIB
PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF12515	PFAM:PF13246	PRINTS:PR00119
PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR24093	PANTHER:PTHR24093:SF262	InterPro:P_typ_ATPase	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517	TMHMM:TMhelix
UniParc:UPI0004EDCB60	SEG:seg	:	:	:	:

Description

BnaA03g54160DCalcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A078GVP1]

Coordinates

chrLK032239:-:348311..353484

Molecular Weight (calculated)

110405.0 Da

IEP (calculated)

5.446

GRAVY (calculated)

0.228

Length

1014 amino acids

Sequence
(BLAST)

0001: MESYLNQNFD VKAKHSSEEA LEKWRNLCGV VKNPKRRFRF TANLSKRYEA AAMRRTNQEK LRIAVLVSKA AFQFISGVAP SDYTVPEEVK AAGFDICADE
0101: LGSIVESHDV KKLKFHGGVD GLAGKLKASP TEGLSTDAAH LSQRQDLFGI NKFAESELKS FWVFVWEALQ DMTLMILGVC AFVSLIVGIA TEGWPKGSHD
0201: GLGIVASILL VVFVTATSDY RQSLQFRDLD KEKKKITVQV TRSGFRQKLS IYDLLPGDIV HLAIGDQVPA DGLFLSGFSV VIDESSLTGE SEPVMVNAQN
0301: PFLLSGTKVQ DGSCKMLITT VGMRTQWGKL MATLTEGGDD ETPLQVKLNG VATIIGKIGL FFAVVTFAVL VQGMFMRKLS TGTHWIWSGD EALELLEYFA
0401: IAVTIVVVAV PEGLPLAVTL SLAFAMKKMM NDKALVRHLA ACETMGSATT ICSDKTGTLT TNHMTVVKSC ICMNVQDVAN KGSSLQSEIP ESALKLLIQS
0501: IFNNTGGEVV VNKHGKTEIL GTPTETAILE LGLSLGGKFQ EERKSYKVIK VEPFNSTKKR MGVVIELPEG GSLRAHTKGA SEIVLAACDK VVNSSGEVVP
0601: LDEESIKYLN VTINEFANEA LRTLCLAYMD LENGFSPDEA IPASGFTCVG IVGIKDPVRA GVKESVELCR RAGITVRMVT GDNINTAKAI ARECGILTDD
0701: GIAIEGPVFR EKSQEELLEL IPKIQVMARS SPMDKHTLVK QLRTTFDEVV AVTGDGTNDA PALHEADIGL AMGIAGTEVA KESADVIILD DNFSTIVTVA
0801: KWGRSVYINI QKFVQFQLTV NVVALIVNFS SACLTGDAPL TAVQLLWVNM IMDTLGALAL ATEPPNNELM KRLPVGRRGN FITNAMWRNI LGQSVYQFIV
0901: IWFLQAKGKS MFGLDGPDST LMLNTLIFNC FVFCQVFNEI SSREMEEIDV FKGILDNYVF VVVIGATVFF QIIIIEFLGT FASTTPLTIV QWIFSIIIGF
1001: LGMPIAAGLK MIPV

Best Arabidopsis Sequence Match ( AT4G37640.1 )
(BLAST)

0001: MESYLNENFD VKAKHSSEEV LEKWRNLCGV VKNPKRRFRF TANLSKRYEA AAMRRTNQEK LRIAVLVSKA AFQFISGVSP SDYTVPEDVK AAGFEICADE
0101: LGSIVESHDV KKLKFHGGVD GLAGKLKASP TDGLSTEAAQ LSQRQELFGI NKFAESEMRG FWVFVWEALQ DMTLMILGVC AFVSLIVGIA TEGWPKGSHD
0201: GLGIAASILL VVFVTATSDY RQSLQFRDLD KEKKKITVQV TRNGFRQKLS IYDLLPGDIV HLAIGDQVPA DGLFLSGFSV VIDESSLTGE SEPVMVNAQN
0301: PFLMSGTKVQ DGSCKMMITT VGMRTQWGKL MATLTEGGDD ETPLQVKLNG VATIIGKIGL FFAVVTFAVL VQGMFMRKLS TGTHWVWSGD EALELLEYFA
0401: IAVTIVVVAV PEGLPLAVTL SLAFAMKKMM NDKALVRHLA ACETMGSATT ICSDKTGTLT TNHMTVVKSC ICMNVQDVAN KGSSLQSEIP ESAVKLLIQS
0501: IFNNTGGEVV VNKHGKTELL GTPTETAILE LGLSLGGKFQ EERKSYKVIK VEPFNSTKKR MGVVIELPEG GRMRAHTKGA SEIVLAACDK VVNSSGEVVP
0601: LDEESIKYLN VTINEFANEA LRTLCLAYMD IEGGFSPDDA IPASGFTCVG IVGIKDPVRP GVKESVELCR RAGITVRMVT GDNINTAKAI ARECGILTDD
0701: GIAIEGPVFR EKNQEELLEL IPKIQVMARS SPMDKHTLVK QLRTTFDEVV AVTGDGTNDA PALHEADIGL AMGIAGTEVA KESADVIILD DNFSTIVTVA
0801: KWGRSVYINI QKFVQFQLTV NVVALVVNFS SACLTGSAPL TAVQLLWVNM IMDTLGALAL ATEPPNDELM KRLPVGRRGN FITNAMWRNI LGQAVYQFIV
0901: IWILQAKGKA MFGLDGPDST LMLNTLIFNC FVFCQVFNEI SSREMEEIDV FKGILDNYVF VVVIGATVFF QIIIIEFLGT FASTTPLTIT QWIFSIFIGF
1001: LGMPIAAGLK TIPV

Arabidopsis Description

ACA2Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178V2M5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.