Factsheet for TraesCS4D01G079200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
peroxisome 1
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G234700.1	Wheat	plastid	96.57	96.39
TraesCS4B01G080300.1	Wheat	plastid	96.19	96.01
HORVU4Hr1G013660.3	Barley	plasma membrane, plastid	95.14	95.14
Os03t0616400-01	Rice	plastid	76.48	77.73
EER93815	Sorghum	plastid	74.76	75.99
Zm00001d033334_P001	Maize	plastid	74.38	75.53
TraesCS5D01G080700.1	Wheat	plasma membrane	71.9	74.02
GSMUA_Achr4P32520_001	Banana	plasma membrane	55.71	70.74
KRH28359	Soybean	cytosol, peroxisome, plasma membrane	67.24	69.49
KRH77121	Soybean	cytosol, endoplasmic reticulum, peroxisome	66.76	69.13
KRH61405	Soybean	endoplasmic reticulum	66.29	68.3
CDY29571	Canola	plasma membrane	65.81	68.15
AT4G37640.1	Thale cress	plasma membrane	65.81	68.15
KRH52089	Soybean	endoplasmic reticulum, mitochondrion	66.1	68.11
CDX72644	Canola	plasma membrane	65.71	68.05
Bra017841.1-P	Field mustard	plasma membrane	65.71	68.05
KRH58090	Soybean	cytosol	65.62	67.95
KRH04436	Soybean	cytosol, endoplasmic reticulum, plasma membrane	65.62	67.95
Solyc02g092450.2.1	Tomato	nucleus, unclear	65.81	67.94
AT2G22950.1	Thale cress	cytosol, peroxisome, plasma membrane	65.43	67.68
PGSC0003DMT400055386	Potato	plasma membrane	65.43	67.62
Solyc04g077870.2.1	Tomato	plasma membrane	65.43	67.62
CDY22420	Canola	plasma membrane	65.33	67.52
CDY44033	Canola	plasma membrane	65.52	67.52
VIT_18s0001g09150.t01	Wine grape	plasma membrane	65.43	67.49
CDY49443	Canola	plasma membrane	65.14	67.46
Bra039940.1-P	Field mustard	plasma membrane	65.05	67.36
PGSC0003DMT400033890	Potato	cytosol, peroxisome, plasma membrane	65.24	67.36
PGSC0003DMT400055192	Potato	plasma membrane	65.24	67.36
TraesCS4D01G257900.1	Wheat	plasma membrane	65.43	67.35
CDX76883	Canola	plasma membrane	64.95	67.26
Solyc02g064680.2.1	Tomato	nucleus, unclear	65.14	67.26
Bra010917.1-P	Field mustard	plasma membrane	65.05	67.16
VIT_07s0129g00180.t01	Wine grape	plasma membrane	65.14	67.12
CDX90109	Canola	plasma membrane	64.86	66.96
AT1G27770.1	Thale cress	plasma membrane	64.95	66.86
CDY11764	Canola	plasma membrane	64.67	66.77
Bra010605.1-P	Field mustard	plasma membrane	65.33	66.6
VIT_07s0129g00110.t01	Wine grape	plasma membrane	32.38	63.55
TraesCS5D01G142900.2	Wheat	plasma membrane	55.52	56.27
TraesCS1D01G312500.1	Wheat	plasma membrane	54.19	54.61
TraesCS3D01G470100.1	Wheat	plasma membrane	53.14	53.5
TraesCS2D01G430700.1	Wheat	plasma membrane	44.1	42.91
TraesCS5D01G284100.3	Wheat	plasma membrane	43.52	42.51
TraesCS6D01G142400.1	Wheat	cytosol, nucleus, plasma membrane	44.1	42.36
TraesCS7D01G252900.4	Wheat	cytosol	43.62	42.29
TraesCS1D01G066500.1	Wheat	mitochondrion	33.81	42.06
TraesCS1D01G335400.1	Wheat	plastid	40.67	41.86
TraesCS1D01G335500.1	Wheat	plastid	40.48	41.79
TraesCS4D01G060900.1	Wheat	plasma membrane	25.43	26.7
TraesCS4D01G202200.2	Wheat	plasma membrane	26.48	26.18
TraesCS1D01G047900.1	Wheat	plasma membrane	26.19	26.09
TraesCS4D01G079100.1	Wheat	nucleus	2.95	4.74

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0070588	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	InterPro:P-type_ATPase_IIB
PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF08282	PFAM:PF13246	PRINTS:PR00119
PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR24093	PANTHER:PTHR24093:SF420	InterPro:P_typ_ATPase	SMART:SM00831
SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4D01G079200	EnsemblPlants:TraesCS4D01G079200.1	TIGR:cd02081	SEG:seg	:

Description

No Description!

Coordinates

chr4D:+:53237642..53242014

Molecular Weight (calculated)

113350.0 Da

IEP (calculated)

4.689

GRAVY (calculated)

0.137

Length

1050 amino acids

Sequence
(BLAST)

0001: MHSGLLARPL QLAPLYGAAS PPAALPCRRT PWARPGLGVS TATLRRPCRR NPCGAAKTER PDRRGFRFAA AGQLSSSPRP QREKLQVAAS ASKAAVQLQN
0101: GLSLQSSQYV VPEDVRAAGF QIDADELTSI VESRDTERLT EHGQLDGIAD KLATSLTDGI STREGLLGQR QEIYGVNKFA ESEPRSFWEF VWDALQDTTL
0201: IILAACAFVS LTVGIATEGW PNGSHDGIGI FASIILVVSV TATSDYQQSL QFRDLDKEKR KILVQVTRDG FRQRTLIDDL LPGDVVHLAV GDQVPADGVF
0301: ISGFSLLLDE SSLTGESEPV DVNEDKPFLS SGTKVLDGSG QMLVTAVGMR TQWGKLMAAL TEGGNDETPL QVKLSGVANI IGKIGLFFAV LTFIVLSQEL
0401: IGQKYHDGLL LSWSGDDVLE ILNHFAVAVT IVVVAVPEGL PLAVTLSLAY AMEKMMNDKA LVRQLAACET MGSATVICSD KTGTLTSNRM TVVKACICGN
0501: TLEFNDPLSS LSSELPEVAV ETLLESILTN TGGEVVIDQN GKQDIIGTPT ETALLEFALS LGGNYKQKRQ ESKIVKVEPF NSVKKRMTVI LELPGGGYRA
0601: HCKGAAEIVL AACDKFIDGS GSVVPLDKKT ANLLNDTIET FSSEALRTLC LAYRGLEDGS TQEEIPLQGY TFIGIVGIKD PVRLGVRESV ASCRSAGIAV
0701: KMVTGDNINT AKAIARECGI LTDGGLAIEG AEFREKTPEE LLELIPKMQV LARSSPLDKL ALVKYLRTTS NEVVAVTGDG TNDAPALREA DIGLAMGIAG
0801: TEVAKESADV VILDDNFSTI VTVAKWGRSV YVNIQKFVQF QLTVNIVALL VNFSSACFTG DAPLTAVQLL WVNMIMDTLG ALALATEPPN DNLMEKAPVG
0901: RTGKFITNVM WRNILGQSLY QFTVIWYLQS QGRYVFGLEG SEADTVLNTI IFNTFVFCQV FNEVSSREME EINVLKGMSE NSIFVGVLTG TVVFQFILVQ
1001: FLGDFANTTL LTQLQWLICI LFGFLGMPIA AMIKLISVEP HEEHDGYGKL

Best Arabidopsis Sequence Match ( AT1G27770.1 )
(BLAST)

0001: MESYLNENFG DVKPKNSSDE ALQRWRKLCW IVKNPKRRFR FTANLSKRSE AEAIRRSNQE KFRVAVLVSQ AALQFINSLK LSSEYTLPEE VRKAGFEICP
0101: DELGSIVEGH DLKKLKIHGG TEGLTEKLST SIASGISTSE DLLSVRKEIY GINQFTESPS RGFWLFVWEA LQDTTLMILA ACAFVSLIVG ILMEGWPIGA
0201: HDGLGIVASI LLVVFVTATS DYRQSLQFKD LDAEKKKIVV QVTRDKLRQK ISIYDLLPGD VVHLGIGDQI PADGLFISGF SVLINESSLT GESEPVSVSV
0301: EHPFLLSGTK VQDGSCKMLV TTVGMRTQWG KLMATLSEGG DDETPLQVKL NGVATIIGKI GLFFAVITFA VLVQGLANQK RLDNSHWIWT ADELMAMLEY
0401: FAVAVTIVVV AVPEGLPLAV TLSLAFAMKK MMNDKALVRN LAACETMGSA TTICSDKTGT LTTNHMTVVK ACICEQAKEV NGPDAAMKFA SGIPESAVKL
0501: LLQSIFTNTG GEIVVGKGNK TEILGTPTET ALLEFGLSLG GDFQEVRQAS NVVKVEPFNS TKKRMGVVIE LPERHFRAHC KGASEIVLDS CDKYINKDGE
0601: VVPLDEKSTS HLKNIIEEFA SEALRTLCLA YFEIGDEFSL EAPIPSGGYT CIGIVGIKDP VRPGVKESVA ICKSAGITVR MVTGDNLTTA KAIARECGIL
0701: TDDGIAIEGP EFREKSDEEL LKLIPKLQVM ARSSPMDKHT LVRLLRTMFQ EVVAVTGDGT NDAPALHEAD IGLAMGISGT EVAKESADVI ILDDNFSTIV
0801: TVAKWGRSVY INIQKFVQFQ LTVNVVALIV NFLSACLTGN APLTAVQLLW VNMIMDTLGA LALATEPPQD DLMKRSPVGR KGNFISNVMW RNILGQSLYQ
0901: LVIIWCLQTK GKTMFGLDGP DSDLTLNTLI FNIFVFCQVF NEISSREMEK IDVFKGILKN YVFVAVLTCT VVFQVIIIEL LGTFADTTPL NLGQWLVSII
1001: LGFLGMPVAA ALKMIPVGSH

Arabidopsis Description

ACA1Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178WD16]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.