Factsheet for VIT_07s0129g00180.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
plastid 2
endoplasmic reticulum 2
vacuole 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_05s0102g00450.t01
VIT_06s0080g00970.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G37640.1	VIT_05s0102g00450.t01	AT4G03290.1	21798944
AT4G37640.1	VIT_06s0080g00970.t01	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0129g00110.t01	Wine grape	plasma membrane	52.31	99.63
KRH77121	Soybean	cytosol, endoplasmic reticulum, peroxisome	84.99	85.4
KRH28359	Soybean	cytosol, peroxisome, plasma membrane	84.79	85.04
AT4G37640.1	Thale cress	plasma membrane	82.53	82.94
Bra017841.1-P	Field mustard	plasma membrane	82.43	82.84
CDY29571	Canola	plasma membrane	82.43	82.84
VIT_18s0001g09150.t01	Wine grape	plasma membrane	82.73	82.81
CDX72644	Canola	plasma membrane	82.24	82.64
GSMUA_Achr4P32520_001	Banana	plasma membrane	66.93	82.47
GSMUA_Achr4P10940_001	Banana	cytosol	72.23	82.42
GSMUA_Achr6P16920_001	Banana	cytosol	62.22	82.34
CDY44033	Canola	plasma membrane	82.34	82.34
CDY22420	Canola	plasma membrane	82.04	82.28
KRH58090	Soybean	cytosol	81.84	82.25
Solyc02g092450.2.1	Tomato	nucleus, unclear	81.94	82.1
Solyc02g064680.2.1	Tomato	nucleus, unclear	81.84	82.01
PGSC0003DMT400055192	Potato	plasma membrane	81.65	81.81
PGSC0003DMT400033890	Potato	cytosol, peroxisome, plasma membrane	81.65	81.81
KRH04436	Soybean	cytosol, endoplasmic reticulum, plasma membrane	81.35	81.76
AT2G22950.1	Thale cress	cytosol, peroxisome, plasma membrane	81.16	81.48
Bra010605.1-P	Field mustard	plasma membrane	81.84	80.97
Bra039940.1-P	Field mustard	plasma membrane	80.47	80.87
CDY49443	Canola	plasma membrane	80.47	80.87
CDX76883	Canola	plasma membrane	80.37	80.77
Os12t0586600-01	Rice	plasma membrane	78.61	78.53
KXG23838	Sorghum	plasma membrane	78.21	78.14
Zm00001d030893_P004	Maize	plasma membrane	77.82	77.75
TraesCS5D01G080700.1	Wheat	plasma membrane	77.33	77.25
TraesCS5B01G075100.2	Wheat	plasma membrane	77.23	77.16
TraesCS5A01G068700.1	Wheat	plasma membrane	77.13	77.06
HORVU5Hr1G018160.3	Barley	cytosol	76.45	75.41
Os03t0616400-01	Rice	plastid	68.11	67.18
EER93815	Sorghum	plastid	67.81	66.89
Zm00001d033334_P001	Maize	plastid	67.12	66.15
HORVU4Hr1G013660.3	Barley	plasma membrane, plastid	67.71	65.71
TraesCS4D01G079200.1	Wheat	plasma membrane	67.12	65.14
TraesCS4B01G080300.1	Wheat	plastid	66.93	64.83
TraesCS4A01G234700.1	Wheat	plastid	66.54	64.45
VIT_13s0158g00360.t01	Wine grape	plasma membrane	64.18	63.13
VIT_08s0007g08960.t01	Wine grape	plasma membrane	63.3	62.44
GSMUA_Achr3P30070_001	Banana	cytosol, nucleus, plasma membrane	71.84	45.3
VIT_11s0052g00320.t01	Wine grape	plasma membrane	47.89	45.19
VIT_05s0020g04350.t01	Wine grape	plasma membrane	13.84	44.34
VIT_05s0020g04380.t01	Wine grape	plasma membrane	43.67	43.97
VIT_09s0018g02130.t01	Wine grape	plasma membrane	48.18	43.26
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	42.69	43.2
VIT_05s0020g04390.t01	Wine grape	plastid	42.89	43.18
VIT_14s0030g02080.t01	Wine grape	plasma membrane	44.55	42.67
VIT_19s0014g01620.t01	Wine grape	plasma membrane	24.14	42.63
VIT_14s0030g02110.t01	Wine grape	plasma membrane	41.12	42.37
VIT_05s0020g04300.t01	Wine grape	plasma membrane	43.18	41.98
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	43.08	41.81
VIT_05s0020g04280.t01	Wine grape	plastid	43.67	41.63
VIT_05s0020g04240.t01	Wine grape	plasma membrane	38.76	41.23
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	42.3	40.43
VIT_05s0020g04360.t01	Wine grape	plasma membrane	25.32	35.59
VIT_00s0691g00010.t01	Wine grape	plasma membrane	24.24	31.71
VIT_00s0463g00030.t01	Wine grape	plasma membrane	27.87	27.95
VIT_18s0001g08850.t01	Wine grape	plasma membrane	24.53	26.97
VIT_08s0040g02830.t01	Wine grape	plasma membrane	27.87	26.72
VIT_15s0046g00040.t01	Wine grape	plasma membrane	27.28	26.45
VIT_06s0004g03900.t01	Wine grape	plasma membrane	27.48	26.39
VIT_05s0020g04270.t01	Wine grape	plasma membrane	40.43	23.06
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	42.59	21.16
VIT_05s0020g04220.t01	Wine grape	plastid	42.2	20.91

Protein Annotations

Gene3D:1.20.1110.10	EntrezGene:100247373	wikigene:100247373	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10
Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sf	ProteinID:CCB57745	ProteinID:CCB57745.1	InterPro:Ca_ATPase_N_dom	UniProt:F6HST5	EMBL:FN596246
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488
GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006811	GO:GO:0006816	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0043231	GO:GO:0070588	GO:GO:0099132
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	EntrezGene:LOC100247373	wikigene:LOC100247373
InterPro:P-type_ATPase_IIB	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF00702	PFAM:PF12515
PFAM:PF13246	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR24093	PANTHER:PTHR24093:SF262
InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665
TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517	TMHMM:TMhelix	UniParc:UPI00015C9686	ArrayExpress:VIT_07s0129g00180	EnsemblPlantsGene:VIT_07s0129g00180
EnsemblPlants:VIT_07s0129g00180.t01	unigene:Vvi.25775	RefSeq:XP_002284429	RefSeq:XP_002284429.1	SEG:seg	:

Description

Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HST5]

Coordinates

chr7:+:15444465..15450307

Molecular Weight (calculated)

110816.0 Da

IEP (calculated)

5.599

GRAVY (calculated)

0.208

Length

1019 amino acids

Sequence
(BLAST)

0001: MESYLDENFS GVKPKHSSDE VLQRWRNLCS VVKNPKRRFR FTANLSKRGE AAAMRRTNQE KLRIAVLVSK AALQFIQGVP VSDYVVPEEI KAAGFQICAD
0101: ELGSIVEGHD VKKLKIHGGV DGIAEKLSTS TTYGLTADNK LLNHRQEIYG INKFTETQAR GFLVFVWEAL HDMTLIILAV CALVSLIVGI AMEGWPVGAH
0201: DGLGIVASIL LVVLVTATSD YRQSLQFRDL DKEKKKISIQ VTRNGYRHKM SIYDLLPGDI VHLSIGDQVP ADGLFVSGFC VSIDESSLTG ESEPVMVSAE
0301: NPFLLSGTKV QDGSCKMMIT TVGMRTQWGK LMATLSEGGD DETPLQVKLN GVATFIGKIG LVFAVVTFAV LVQGLFNRKL GEGTHWSWSG DDALEMLEFF
0401: AIAVTIVVVA VPEGLPLAVT LSLAFAMKKM MNDKALVRHL AACETMGSAT CICSDKTGTL TTNHMTVVKS CICMNVKDVD RQSNASSFCS EIPDSTVKLL
0501: LQSIFNNSGG EVVINKEGKL EILGSPTDAA LLEFGLFLGG DFQGERQAPK LIKVEPFNST KKRMGVVLEL PEGGLRAHTK GASEIILAAC DKMIDSNGEV
0601: VPLDEASIDH LKATINQFAS EALRTLCLAY MELENGFSPN DPIPLSGYTC IGIVGIKDPV RPGVKESVAI CRSAGITVRM VTGDNINTAK AIARECGILT
0701: DDGIAIEGPD FREKSEEELF KLIPKIQVMA RSSPLDKHTL VKHLRTTFGE VVAVTGDGTN DAPALHEADI GLAMGIAGTE VAKESADVII LDDNFSTIAT
0801: VAKWGRSVYI NIQKFVQFQL TVNVVALIVN FSSACLTGNA PLTAVQLLWV NMIMDTLGAL ALATEPPTDD LMKRAPVGRR GNFISNVMWR NILGQSLYQF
0901: LVIWYLQVEG KAIFQLNGPD SDLILNTLIF NSFVFCQVFN EISSREMEKI NVFKGILDNY VFAAVLTSTV LFQIIIIEYL GTYANTSPLT LSQWFLSVFI
1001: GFLGMPIAAA LKMIPVASQ

Best Arabidopsis Sequence Match ( AT4G37640.1 )
(BLAST)

0001: MESYLNENFD VKAKHSSEEV LEKWRNLCGV VKNPKRRFRF TANLSKRYEA AAMRRTNQEK LRIAVLVSKA AFQFISGVSP SDYTVPEDVK AAGFEICADE
0101: LGSIVESHDV KKLKFHGGVD GLAGKLKASP TDGLSTEAAQ LSQRQELFGI NKFAESEMRG FWVFVWEALQ DMTLMILGVC AFVSLIVGIA TEGWPKGSHD
0201: GLGIAASILL VVFVTATSDY RQSLQFRDLD KEKKKITVQV TRNGFRQKLS IYDLLPGDIV HLAIGDQVPA DGLFLSGFSV VIDESSLTGE SEPVMVNAQN
0301: PFLMSGTKVQ DGSCKMMITT VGMRTQWGKL MATLTEGGDD ETPLQVKLNG VATIIGKIGL FFAVVTFAVL VQGMFMRKLS TGTHWVWSGD EALELLEYFA
0401: IAVTIVVVAV PEGLPLAVTL SLAFAMKKMM NDKALVRHLA ACETMGSATT ICSDKTGTLT TNHMTVVKSC ICMNVQDVAN KGSSLQSEIP ESAVKLLIQS
0501: IFNNTGGEVV VNKHGKTELL GTPTETAILE LGLSLGGKFQ EERKSYKVIK VEPFNSTKKR MGVVIELPEG GRMRAHTKGA SEIVLAACDK VVNSSGEVVP
0601: LDEESIKYLN VTINEFANEA LRTLCLAYMD IEGGFSPDDA IPASGFTCVG IVGIKDPVRP GVKESVELCR RAGITVRMVT GDNINTAKAI ARECGILTDD
0701: GIAIEGPVFR EKNQEELLEL IPKIQVMARS SPMDKHTLVK QLRTTFDEVV AVTGDGTNDA PALHEADIGL AMGIAGTEVA KESADVIILD DNFSTIVTVA
0801: KWGRSVYINI QKFVQFQLTV NVVALVVNFS SACLTGSAPL TAVQLLWVNM IMDTLGALAL ATEPPNDELM KRLPVGRRGN FITNAMWRNI LGQAVYQFIV
0901: IWILQAKGKA MFGLDGPDST LMLNTLIFNC FVFCQVFNEI SSREMEEIDV FKGILDNYVF VVVIGATVFF QIIIIEFLGT FASTTPLTIT QWIFSIFIGF
1001: LGMPIAAGLK TIPV

Arabidopsis Description

ACA2Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178V2M5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.