Factsheet for VIT_05s0020g04350.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 2
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400096083	Potato	plasma membrane	65.09	66.56
PGSC0003DMT400062826	Potato	plasma membrane	65.41	59.6
PGSC0003DMT400097702	Potato	plasma membrane	62.58	55.74
VIT_19s0014g01620.t01	Wine grape	plasma membrane	63.84	35.18
VIT_05s0020g04390.t01	Wine grape	plastid	71.7	22.53
VIT_05s0020g04380.t01	Wine grape	plasma membrane	70.75	22.23
VIT_05s0020g04240.t01	Wine grape	plasma membrane	66.04	21.92
VIT_05s0020g04300.t01	Wine grape	plasma membrane	70.75	21.47
VIT_05s0020g04280.t01	Wine grape	plastid	71.07	21.14
KRG93759	Soybean	plastid	67.3	20.8
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	69.18	20.64
CDY40822	Canola	plasma membrane	65.41	20.47
CDY34219	Canola	plasma membrane	65.41	20.45
Bra023790.1-P	Field mustard	plasma membrane	65.41	20.45
CDY10680	Canola	plasma membrane	64.78	20.32
Bra033900.1-P	Field mustard	plasma membrane	64.78	20.3
AT3G22910.1	Thale cress	plasma membrane	64.78	20.26
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	66.67	20.19
CDY10319	Canola	plasma membrane	64.78	20.1
GSMUA_Achr7P25650_001	Banana	plasma membrane	46.23	19.86
VIT_07s0129g00110.t01	Wine grape	plasma membrane	33.02	19.63
GSMUA_Achr4P10650_001	Banana	mitochondrion	48.43	19.44
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	61.32	19.36
VIT_14s0030g02110.t01	Wine grape	plasma membrane	59.75	19.21
VIT_14s0030g02080.t01	Wine grape	plasma membrane	64.15	19.17
PGSC0003DMT400089589	Potato	plasma membrane	44.65	18.04
TraesCSU01G003600.1	Wheat	plastid	54.72	17.13
TraesCS1D01G335500.1	Wheat	plastid	54.72	17.11
TraesCS1B01G346400.1	Wheat	plastid	54.72	17.06
TraesCS1D01G335400.1	Wheat	plastid	54.72	17.06
HORVU1Hr1G076950.3	Barley	plastid	55.03	17.02
TraesCS1A01G332800.1	Wheat	plastid	54.72	16.99
Os10t0418100-01	Rice	golgi	54.72	16.81
EER91614	Sorghum	plasma membrane	53.46	16.8
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	53.46	16.77
VIT_11s0052g00320.t01	Wine grape	plasma membrane	55.03	16.2
PGSC0003DMT400093936	Potato	plasma membrane	62.26	16.06
HORVU0Hr1G016220.1	Barley	peroxisome, plasma membrane	43.71	16.05
TraesCS1A01G161100.1	Wheat	mitochondrion	35.53	15.25
VIT_09s0018g02130.t01	Wine grape	plasma membrane	54.4	15.24
VIT_00s0691g00010.t01	Wine grape	plasma membrane	35.22	14.38
VIT_07s0129g00180.t01	Wine grape	plasma membrane	44.34	13.84
VIT_18s0001g09150.t01	Wine grape	plasma membrane	42.45	13.26
VIT_13s0158g00360.t01	Wine grape	plasma membrane	42.77	13.13
TraesCS4B01G007200.1	Wheat	cytosol, peroxisome, plasma membrane	39.94	13.11
VIT_08s0007g08960.t01	Wine grape	plasma membrane	42.14	12.97
TraesCS1D01G066500.1	Wheat	mitochondrion	33.96	12.8
VIT_05s0020g04270.t01	Wine grape	plasma membrane	67.61	12.03
VIT_05s0020g04220.t01	Wine grape	plastid	71.7	11.09
VIT_00s0463g00030.t01	Wine grape	plasma membrane	34.91	10.93
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	70.13	10.87
PGSC0003DMT400089336	Potato	plasma membrane	24.84	8.73
VIT_06s0004g03900.t01	Wine grape	plasma membrane	27.99	8.39
VIT_18s0001g08850.t01	Wine grape	plasma membrane	24.21	8.31
VIT_08s0040g02830.t01	Wine grape	plasma membrane	26.73	8.0
VIT_15s0046g00040.t01	Wine grape	plasma membrane	26.42	7.99
Zm00001d043925_P001	Maize	plasma membrane	5.66	2.87
PGSC0003DMT400096782	Potato	plasma membrane	1.89	0.93
VIT_05s0020g04360.t01	Wine grape	plasma membrane	0.31	0.14
Solyc09g082890.1.1	Tomato	peroxisome, plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:3.40.50.1000	MapMan:35.1	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	ProteinID:CCB50474
ProteinID:CCB50474.1	UniProt:F6HDV3	EMBL:FN595749	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005388	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0043231
GO:GO:0070588	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF00689
PRINTS:PR00119	PRINTS:PR00120	PANTHER:PTHR24093	PANTHER:PTHR24093:SF414	InterPro:P_typ_ATPase	SUPFAM:SSF56784
SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TMHMM:TMhelix	UniParc:UPI000210AA24	ArrayExpress:VIT_05s0020g04350	EnsemblPlantsGene:VIT_05s0020g04350
EnsemblPlants:VIT_05s0020g04350.t01	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5:-:6104459..6107262

Molecular Weight (calculated)

35940.1 Da

IEP (calculated)

8.323

GRAVY (calculated)

-0.047

Length

318 amino acids

Sequence
(BLAST)

001: MARSSPFDKL LMVQCLKQKG HVVAVTGDDT NDAPALKEAH IGLSMGIQGT EVAKESSDII ILDDNFTSVA TVLRWGRCVY DNIQKLIQLQ LTMNVAALVI
101: NVVAAVSARE VPFTELKLLW VNLILDTLCA LTLATGQPTK DLMEEPPVRR TQPLITNIMW RNILGQALYQ IAVVLTLQFS GESIFDVNEK VKDTLILNTS
201: VLCQVFNQFN ARKLEKKNVF EGMHKNKLFW GIIGITIILE VVVVEFLKKF ADTERLRKMA MMGWMERERR NRERRKQAKG ERVEVDRRRG DGVADSNVAS
301: DGSMVMGVRV EEKEEMQF

Best Arabidopsis Sequence Match ( AT3G22910.1 )
(BLAST)

0001: MRRNVSDHAE KKDKVGVEVL LELPKTLSKS NKKWQLALIK LYCSRTLLNC AKHAIRKPGL FPRSLSYTAI DLDHHHGDDH FKIDTETLND LVKNKNQEKL
0101: ESLGGPNGLV SALKSNTRLG INEEGDEIQR RRSTFGSNTY TRQPSKGLFH FVVEAFKDLT ILILLGCATL SLGFGIKEHG LKEGWYDGGS IFVAVFLVVA
0201: VSAVSNFRQN RQFDKLSKVS SNIKIDVVRN GRRQEISIFD IVVGDIVCLN IGDQVPADGV FVEGHLLHVD ESSMTGESDH VEVSLTGNTF LFSGTKIADG
0301: FGKMAVTSVG MNTAWGQMMS HISRDTNEQT PLQSRLDKLT SSIGKVGLLV AFLVLLVLLI RYFTGTTKDE SGNREYNGKT TKSDEIVNAV VKMVAAAVTI
0401: IVVAIPEGLP LAVTLTLAYS MKRMMKDNAM VRKLSACETM GSATVICTDK TGTLTLNQMK VTDFWFGLES GKASSVSQRV VELFHQGVAM NTTGSVFKAK
0501: AGTEYEFSGS PTEKAILSWA VEELEMGMEK VIEEHDVVHV EGFNSEKKRS GVLMKKKGVN TENNVVHWKG AAEKILAMCS TFCDGSGVVR EMKEDDKIQF
0601: EKIIQSMAAK SLRCIAFAYS EDNEDNKKLK EEKLSLLGII GIKDPCRPGV KKAVEDCQFA GVNIKMITGD NIFTARAIAV ECGILTPEDE MNSEAVLEGE
0701: KFRNYTQEER LEKVERIKVM ARSSPFDKLL MVKCLKELGH VVAVTGDGTN DAPALKEADI GLSMGIQGTE VAKESSDIVI LDDNFASVAT VLKWGRCVYN
0801: NIQKFIQFQL TVNVAALVIN FVAAVSAGDV PLTAVQLLWV NLIMDTLGAL ALATEKPTND LMKKKPIGRV APLITNIMWR NLLAQAFYQI SVLLVLQFRG
0901: RSIFNVTEKV KNTLIFNTFV LCQVFNEFNA RSLEKKNVFK GLHKNRLFIG IIVVTVVLQV VMVEFLKRFA DTERLNLGQW GVCIAIAAAS WPIGWLVKSV
1001: PVPERHFFSY LKWKKRS

Arabidopsis Description

ACA13Putative calcium-transporting ATPase 13, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.