Factsheet for VIT_05s0020g04380.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 5
cytosol 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g04390.t01	Wine grape	plastid	94.66	94.66
VIT_05s0020g04360.t01	Wine grape	plasma membrane	61.07	85.24
VIT_05s0020g04300.t01	Wine grape	plasma membrane	87.45	84.45
PGSC0003DMT400062826	Potato	plasma membrane	28.75	83.38
PGSC0003DMT400096083	Potato	plasma membrane	25.3	82.32
VIT_05s0020g04280.t01	Wine grape	plastid	86.76	82.13
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	83.6	79.36
VIT_05s0020g04240.t01	Wine grape	plasma membrane	74.9	79.12
VIT_19s0014g01620.t01	Wine grape	plasma membrane	44.37	77.82
PGSC0003DMT400097702	Potato	plasma membrane	26.78	75.91
KRG93759	Soybean	plastid	76.19	74.93
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	74.6	71.9
CDY40822	Canola	plasma membrane	71.84	71.56
CDY34219	Canola	plasma membrane	71.84	71.48
Bra023790.1-P	Field mustard	plasma membrane	71.74	71.39
VIT_05s0020g04350.t01	Wine grape	plasma membrane	22.23	70.75
CDY10680	Canola	plasma membrane	70.85	70.71
Bra033900.1-P	Field mustard	plasma membrane	70.55	70.34
AT3G22910.1	Thale cress	plasma membrane	70.26	69.91
CDY10319	Canola	plasma membrane	70.36	69.46
VIT_14s0030g02110.t01	Wine grape	plasma membrane	66.21	67.75
PGSC0003DMT400096782	Potato	plasma membrane	42.89	66.98
PGSC0003DMT400089589	Potato	plasma membrane	51.09	65.69
VIT_14s0030g02080.t01	Wine grape	plasma membrane	68.48	65.13
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	64.53	64.85
Solyc09g082890.1.1	Tomato	peroxisome, plasma membrane	24.31	64.06
GSMUA_Achr7P25650_001	Banana	plasma membrane	46.05	62.97
PGSC0003DMT400089336	Potato	plasma membrane	54.55	60.99
GSMUA_Achr4P10650_001	Banana	mitochondrion	46.74	59.72
TraesCS1D01G335400.1	Wheat	plastid	58.1	57.65
TraesCS1B01G346400.1	Wheat	plastid	58.0	57.55
TraesCSU01G003600.1	Wheat	plastid	57.71	57.48
TraesCS1D01G335500.1	Wheat	plastid	57.71	57.42
HORVU1Hr1G076950.3	Barley	plastid	58.1	57.2
TraesCS1A01G332800.1	Wheat	plastid	57.71	57.03
EER91614	Sorghum	plasma membrane	57.02	57.02
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	56.82	56.71
Os10t0418100-01	Rice	golgi	57.31	56.04
PGSC0003DMT400093936	Potato	plasma membrane	67.0	54.99
TraesCS1D01G066500.1	Wheat	mitochondrion	45.65	54.74
HORVU0Hr1G016220.1	Barley	peroxisome, plasma membrane	44.47	51.96
VIT_11s0052g00320.t01	Wine grape	plasma membrane	53.36	50.0
Zm00001d043925_P001	Maize	plasma membrane	30.34	48.89
VIT_09s0018g02130.t01	Wine grape	plasma membrane	53.66	47.84
TraesCS4B01G007200.1	Wheat	cytosol, peroxisome, plasma membrane	43.77	45.72
VIT_05s0020g04270.t01	Wine grape	plasma membrane	79.94	45.27
VIT_07s0129g00180.t01	Wine grape	plasma membrane	43.97	43.67
VIT_13s0158g00360.t01	Wine grape	plasma membrane	44.37	43.34
VIT_18s0001g09150.t01	Wine grape	plasma membrane	43.58	43.32
TraesCS1A01G161100.1	Wheat	mitochondrion	31.23	42.65
VIT_08s0007g08960.t01	Wine grape	plasma membrane	43.48	42.59
VIT_05s0020g04220.t01	Wine grape	plastid	86.07	42.36
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	85.77	42.32
VIT_07s0129g00110.t01	Wine grape	plasma membrane	22.23	42.06
VIT_00s0691g00010.t01	Wine grape	plasma membrane	31.03	40.31
VIT_00s0463g00030.t01	Wine grape	plasma membrane	36.07	35.93
VIT_06s0004g03900.t01	Wine grape	plasma membrane	28.36	27.05
VIT_08s0040g02830.t01	Wine grape	plasma membrane	27.77	26.43
VIT_15s0046g00040.t01	Wine grape	plasma membrane	27.27	26.26
VIT_18s0001g08850.t01	Wine grape	plasma membrane	23.91	26.11

Protein Annotations

Gene3D:1.20.1110.10	EntrezGene:100264868	wikigene:100264868	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10
Gene3D:3.40.50.1000	EMBL:AM458967	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N
InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ProteinID:CAN83227	ProteinID:CAN83227.1	ProteinID:CCB50476	ProteinID:CCB50476.1
ncoils:Coil	UniProt:F6HDV5	EMBL:FN595749	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006811	GO:GO:0006816
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0043231	GO:GO:0070588
GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	EntrezGene:LOC100264868
wikigene:LOC100264868	InterPro:P-type_ATPase_IIB	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF00702
PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR24093	PANTHER:PTHR24093:SF414	InterPro:P_typ_ATPase
SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01517	TMHMM:TMhelix	UniParc:UPI0001983556	ArrayExpress:VIT_05s0020g04380	EnsemblPlantsGene:VIT_05s0020g04380	EnsemblPlants:VIT_05s0020g04380.t01
unigene:Vvi.15644	RefSeq:XP_002279864	RefSeq:XP_002279864.1	SEG:seg	:	:

Description

Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HDV5]

Coordinates

chr5:-:6140681..6143903

Molecular Weight (calculated)

111207.0 Da

IEP (calculated)

6.326

GRAVY (calculated)

0.099

Length

1012 amino acids

Sequence
(BLAST)

0001: MSSILHVNLN CIESILDVPS TLSKPNKRWH LAFATIYCAR VLHSLLNEKK NSSKLPVATP SFVVLNVKPD AFSSIDQTTL TEIVKEKNLK LLLESGGVEG
0101: VADALETDIK NGISGAVDDV ALRQEAFGSN TYKRPPTKSL FHFVVEAFKD LTILILLFCA ALSLGFGIKE HGLKEGWYDG GSIFVAVILV ISVSAVSNFR
0201: QNRQFEKLSK VSNNIKIDVF RNGRRQQISI FEIVVGDVVS LKIGDQVPAD GLFLDGHSLQ VDESSMTGES DHVEVNSSHN PFLFSGTKVA DGYAQMLVTS
0301: VGMNTTWGQM MSTISRDTNE QTPLQARLNK LTSSIGKAGL AVAFLVLLVL LVRYFTGNTE DENGNQEFNG SKTKADDIVN AVVEIIATAV TIVVVAIPEG
0401: LPLAVTLTLA YSMKRMMADQ AMVRKLSACE TMGSATTICT DKTGTLTMNQ MKVTKIWLGQ EPIEVSSSIS ENLLNLIQQG VALNTTGSVY RATSGSYKFE
0501: FFGSPTEKAI LSWAVLELDM DMEILKQNCT ILHVEAFNSE KKRSGVSIRS KADNTIHVHW KGAAEMILAM CSSYYDASGS MKDLDDCERK TFEQIIQGMA
0601: ASSLRCIAFA HKQILEEEHE IREATQKLKE DGLAFVGLVG IKDPCRPGVR KAVEDCQHAG VNVKMITGDN VFTARAIATE CGILRPDQGI NNEAVVEGEV
0701: FRNYTPEERM EKVDKIRVMA RSSPFDKLLM VQCLKQNGHV VAVTGDGTND APALKEADIG LSMGIQGTEV AKESSDIIIL DDNFASVATV LRWGRCVYNN
0801: IQKFIQFQLT VNVAALVINF VAAVSAGEVP LTAVQLLWVN LIMDTLGALA LATEQPTNEL MDRPPVGRTG PLITNIMWRN LLAQAMYQIA VLLTLQFKGE
0901: SIFGVSEKVK DTLIFNTFVL CQVFNEFNAR RLEKKNVFEG IHKNKLFLGI IGITIILQVV MVEFLKKFAD TERLNWGQWG ACLGIAAVSW PLGWVVKCIP
1001: VSNKPFLSYL RW

Best Arabidopsis Sequence Match ( AT3G22910.1 )
(BLAST)

0001: MRRNVSDHAE KKDKVGVEVL LELPKTLSKS NKKWQLALIK LYCSRTLLNC AKHAIRKPGL FPRSLSYTAI DLDHHHGDDH FKIDTETLND LVKNKNQEKL
0101: ESLGGPNGLV SALKSNTRLG INEEGDEIQR RRSTFGSNTY TRQPSKGLFH FVVEAFKDLT ILILLGCATL SLGFGIKEHG LKEGWYDGGS IFVAVFLVVA
0201: VSAVSNFRQN RQFDKLSKVS SNIKIDVVRN GRRQEISIFD IVVGDIVCLN IGDQVPADGV FVEGHLLHVD ESSMTGESDH VEVSLTGNTF LFSGTKIADG
0301: FGKMAVTSVG MNTAWGQMMS HISRDTNEQT PLQSRLDKLT SSIGKVGLLV AFLVLLVLLI RYFTGTTKDE SGNREYNGKT TKSDEIVNAV VKMVAAAVTI
0401: IVVAIPEGLP LAVTLTLAYS MKRMMKDNAM VRKLSACETM GSATVICTDK TGTLTLNQMK VTDFWFGLES GKASSVSQRV VELFHQGVAM NTTGSVFKAK
0501: AGTEYEFSGS PTEKAILSWA VEELEMGMEK VIEEHDVVHV EGFNSEKKRS GVLMKKKGVN TENNVVHWKG AAEKILAMCS TFCDGSGVVR EMKEDDKIQF
0601: EKIIQSMAAK SLRCIAFAYS EDNEDNKKLK EEKLSLLGII GIKDPCRPGV KKAVEDCQFA GVNIKMITGD NIFTARAIAV ECGILTPEDE MNSEAVLEGE
0701: KFRNYTQEER LEKVERIKVM ARSSPFDKLL MVKCLKELGH VVAVTGDGTN DAPALKEADI GLSMGIQGTE VAKESSDIVI LDDNFASVAT VLKWGRCVYN
0801: NIQKFIQFQL TVNVAALVIN FVAAVSAGDV PLTAVQLLWV NLIMDTLGAL ALATEKPTND LMKKKPIGRV APLITNIMWR NLLAQAFYQI SVLLVLQFRG
0901: RSIFNVTEKV KNTLIFNTFV LCQVFNEFNA RSLEKKNVFK GLHKNRLFIG IIVVTVVLQV VMVEFLKRFA DTERLNLGQW GVCIAIAAAS WPIGWLVKSV
1001: PVPERHFFSY LKWKKRS

Arabidopsis Description

ACA13Putative calcium-transporting ATPase 13, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.