Factsheet for VIT_07s0129g00110.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
plastid 2
endoplasmic reticulum 2
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_05s0102g00450.t01
VIT_06s0080g00970.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G37640.1	VIT_05s0102g00450.t01	AT4G03290.1	21798944
AT4G37640.1	VIT_06s0080g00970.t01	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0129g00180.t01	Wine grape	plasma membrane	99.63	52.31
GSMUA_Achr4P10940_001	Banana	cytosol	75.89	45.46
GSMUA_Achr6P16920_001	Banana	cytosol	64.86	45.06
KRH77121	Soybean	cytosol, endoplasmic reticulum, peroxisome	83.55	44.08
KRH28359	Soybean	cytosol, peroxisome, plasma membrane	83.55	44.0
AT4G37640.1	Thale cress	plasma membrane	81.5	43.0
CDY29571	Canola	plasma membrane	80.93	42.7
Bra017841.1-P	Field mustard	plasma membrane	80.93	42.7
CDX72644	Canola	plasma membrane	80.75	42.6
CDY44033	Canola	plasma membrane	80.93	42.49
Solyc02g064680.2.1	Tomato	nucleus, unclear	80.75	42.48
AT2G22950.1	Thale cress	cytosol, peroxisome, plasma membrane	80.56	42.46
VIT_18s0001g09150.t01	Wine grape	plasma membrane	80.75	42.44
CDY22420	Canola	plasma membrane	80.37	42.32
KRH58090	Soybean	cytosol	80.19	42.31
PGSC0003DMT400033890	Potato	cytosol, peroxisome, plasma membrane	80.19	42.18
Solyc02g092450.2.1	Tomato	nucleus, unclear	79.44	41.79
Bra010605.1-P	Field mustard	plasma membrane	80.37	41.75
GSMUA_Achr4P32520_001	Banana	plasma membrane	64.49	41.72
PGSC0003DMT400055192	Potato	plasma membrane	79.25	41.69
KRH04436	Soybean	cytosol, endoplasmic reticulum, plasma membrane	78.88	41.62
Bra039940.1-P	Field mustard	plasma membrane	78.69	41.52
CDY49443	Canola	plasma membrane	78.69	41.52
CDX76883	Canola	plasma membrane	78.69	41.52
KXG23838	Sorghum	plasma membrane	77.2	40.49
Os12t0586600-01	Rice	plasma membrane	77.2	40.49
Zm00001d030893_P004	Maize	plasma membrane	76.82	40.29
TraesCS5D01G080700.1	Wheat	plasma membrane	76.64	40.2
TraesCS5A01G068700.1	Wheat	plasma membrane	76.45	40.1
TraesCS5B01G075100.2	Wheat	plasma membrane	76.45	40.1
HORVU5Hr1G018160.3	Barley	cytosol	74.95	38.82
EER93815	Sorghum	plastid	63.93	33.11
Os03t0616400-01	Rice	plastid	63.93	33.11
VIT_05s0020g04350.t01	Wine grape	plasma membrane	19.63	33.02
HORVU4Hr1G013660.3	Barley	plasma membrane, plastid	64.67	32.95
Zm00001d033334_P001	Maize	plastid	62.99	32.59
TraesCS4D01G079200.1	Wheat	plasma membrane	63.55	32.38
VIT_13s0158g00360.t01	Wine grape	plasma membrane	62.06	32.05
TraesCS4B01G080300.1	Wheat	plastid	62.99	32.03
TraesCS4A01G234700.1	Wheat	plastid	62.8	31.94
VIT_08s0007g08960.t01	Wine grape	plasma membrane	61.31	31.75
GSMUA_Achr3P30070_001	Banana	cytosol, nucleus, plasma membrane	74.39	24.63
VIT_11s0052g00320.t01	Wine grape	plasma membrane	45.98	22.78
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	41.87	22.24
VIT_05s0020g04380.t01	Wine grape	plasma membrane	42.06	22.23
VIT_14s0030g02080.t01	Wine grape	plasma membrane	43.55	21.9
VIT_09s0018g02130.t01	Wine grape	plasma membrane	46.36	21.85
VIT_14s0030g02110.t01	Wine grape	plasma membrane	40.37	21.84
VIT_05s0020g04390.t01	Wine grape	plastid	40.56	21.44
VIT_05s0020g04300.t01	Wine grape	plasma membrane	41.12	20.99
VIT_05s0020g04280.t01	Wine grape	plastid	41.5	20.77
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	40.75	20.76
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	39.44	19.79
VIT_05s0020g04240.t01	Wine grape	plasma membrane	34.39	19.21
VIT_19s0014g01620.t01	Wine grape	plasma membrane	17.2	15.94
VIT_00s0463g00030.t01	Wine grape	plasma membrane	27.85	14.67
VIT_00s0691g00010.t01	Wine grape	plasma membrane	20.75	14.25
VIT_05s0020g04360.t01	Wine grape	plasma membrane	18.13	13.38
VIT_05s0020g04270.t01	Wine grape	plasma membrane	39.44	11.81
VIT_08s0040g02830.t01	Wine grape	plasma membrane	22.99	11.57
VIT_15s0046g00040.t01	Wine grape	plasma membrane	22.62	11.51
VIT_06s0004g03900.t01	Wine grape	plasma membrane	21.87	11.03
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	40.37	10.53
VIT_05s0020g04220.t01	Wine grape	plastid	40.19	10.46
VIT_18s0001g08850.t01	Wine grape	plasma membrane	16.26	9.39

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:35.1	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N
InterPro:ATPase_P-typ_transduc_dom_A_sf	ProteinID:CCB57741	ProteinID:CCB57741.1	InterPro:Ca_ATPase_N_dom	UniProt:F6HST1	EMBL:FN596246
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005515
GO:GO:0005516	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0043231
GO:GO:0070588	GO:GO:0099132	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF12515
PANTHER:PTHR24093	PANTHER:PTHR24093:SF262	SMART:SM00831	SUPFAM:SSF81653	SUPFAM:SSF81665	TMHMM:TMhelix
UniParc:UPI0002108B8E	ArrayExpress:VIT_07s0129g00110	EnsemblPlantsGene:VIT_07s0129g00110	EnsemblPlants:VIT_07s0129g00110.t01	:	:

Description

No Description!

Coordinates

chr7:+:15390296..15395706

Molecular Weight (calculated)

59208.2 Da

IEP (calculated)

6.718

GRAVY (calculated)

0.261

Length

535 amino acids

Sequence
(BLAST)

001: MESYLDENFS GVKPKHSSDE VLQRWRNLCS VVKNPKRRFR FTANLSKRGE AAAMRRTNQE KLRIAVLVSK AAFQFIQGVP VSDYVVPEEI KAAGFQICAD
101: ELGSIVEGHD VKKLKIHGGV DGIAEKLSTS TTNGLTADNK LLNHRQEIYG INKFTETQAR GFLVFVWEAL HDMTLIILAV CALVSLIVGI AMEGWPVGAH
201: DGLGIVASIL LVVLVTATSD YRQSLQFRDL DKEKKKISIQ VTRNGYRHKM SIYDLLPGDI VHLSIGDQVP ADGLFVSGFC VSIDESSLTG ESEPVMVAKE
301: SADVIILDDN FSTIATVAKW GRSVYINIQK FVQFQLTVNV VALIVNFSSA CLTGNAPLTA VQLLWVNMIM DTLGALALAT EPPTDDLMKR APVGRRGNFI
401: SNVMWRNILG QSLYQFLVIW YLQVEGKAIF QLNGPDSDLI LNTLIFNSFV FCQVFNEISS REMEKINVFK GILDNYVFAA VLTSTVLFQI IIIEYLGTYA
501: NTSPLTLSQW FLSVFIGFLG MPIAAALKMI PVASQ

Best Arabidopsis Sequence Match ( AT1G27770.2 )
(BLAST)

001: MESYLNENFG DVKPKNSSDE ALQRWRKLCW IVKNPKRRFR FTANLSKRSE AEAIRRSNQE KFRVAVLVSQ AALQFINSLK LSSEYTLPEE VRKAGFEICP
101: DELGSIVEGH DLKKLKIHGG TEGLTEKLST SIASGISTSE DLLSVRKEIY GINQFTESPS RGFWLFVWEA LQDTTLMILA ACAFVSLIVG ILMEGWPIGA
201: HDGLGIVASI LLVVFVTATS DYRQSLQFKD LDAEKKKIVV QVTRDKLRQK ISIYDLLPGD VVHLGIGDQI PADGLFISGF SVLINESSLT GESEPVSVSV
301: EHPFLLSGTK VQDGSCKMLV TTVGMRTQWG KLMATLSEGG DDETPLQVKL NGVATIIGKI GLFFAVITFA VLVQGLANQK RLDNSHWIWT ADELMAMLEY
401: FAVAVTIVVV AVPEGLPLAV TLSLAFAMKK MMNDKALVRN LAACETMGSA TTICSDKTGT LTTNHMTVVK ACICEQAKEV NGPDAAMKFA SGIPESAVKL
501: LLQSIFTNTG GEIVVGKGNK TEILGTPTET ALLEFGLSLG GDFQEVRQAS NVVKVEPFNS TKKRMGVVIE LPERHFRAHC KGASEIVLDS CDKYINKDGE
601: VVPLDEKSTS HLKNIIEEFA SEALRTLCLA YFEIGPEFRE KSDEELLKLI PKLQVMARSS PMDKHTLVRL LRTMFQEVVA VTGDGTNDAP ALHEADIGLA
701: MGISGTEVAK ESADVIILDD NFSTIVTVAK WGRSVYINIQ KFVQFQLTVN VVALIVNFLS ACLTGNAPLT AVQLLWVNMI MDTLGALALA TEPPQDDLMK
801: RSPVGRKGNF ISNVMWRNIL GQSLYQLVII WCLQTKGKTM FGLDGPDSDL TLNTLIFNIF VFCQVFNEIS SREMEKIDVF KGILKNYVFV AVLTCTVVFQ
901: VIIIELLGTF ADTTPLNLGQ WLVSIILGFL GMPVAAALKM IPVGSH

Arabidopsis Description

ACA1Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178WD16]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.