Factsheet for VIT_05s0020g04280.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
endoplasmic reticulum 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g04300.t01	Wine grape	plasma membrane	88.87	90.65
VIT_05s0020g04390.t01	Wine grape	plastid	82.23	86.86
VIT_05s0020g04380.t01	Wine grape	plasma membrane	82.13	86.76
PGSC0003DMT400062826	Potato	plasma membrane	27.32	83.67
PGSC0003DMT400096083	Potato	plasma membrane	24.13	82.96
VIT_05s0020g04240.t01	Wine grape	plasma membrane	71.47	79.75
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	79.23	79.46
VIT_05s0020g04360.t01	Wine grape	plasma membrane	52.48	77.38
VIT_19s0014g01620.t01	Wine grape	plasma membrane	41.44	76.78
PGSC0003DMT400097702	Potato	plasma membrane	25.44	76.19
KRG93759	Soybean	plastid	71.28	74.05
VIT_05s0020g04350.t01	Wine grape	plasma membrane	21.14	71.07
CDY40822	Canola	plasma membrane	67.17	70.67
CDY34219	Canola	plasma membrane	67.17	70.6
Bra023790.1-P	Field mustard	plasma membrane	67.17	70.6
AT3G22910.1	Thale cress	plasma membrane	66.7	70.11
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	68.85	70.1
CDY10680	Canola	plasma membrane	66.14	69.72
Bra033900.1-P	Field mustard	plasma membrane	65.76	69.26
CDY10319	Canola	plasma membrane	66.14	68.98
VIT_14s0030g02110.t01	Wine grape	plasma membrane	61.93	66.94
PGSC0003DMT400096782	Potato	plasma membrane	40.51	66.82
PGSC0003DMT400089589	Potato	plasma membrane	49.02	66.58
VIT_14s0030g02080.t01	Wine grape	plasma membrane	64.73	65.04
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	60.43	64.15
Solyc09g082890.1.1	Tomato	peroxisome, plasma membrane	23.01	64.06
GSMUA_Achr7P25650_001	Banana	plasma membrane	44.15	63.78
PGSC0003DMT400089336	Potato	plasma membrane	52.01	61.44
GSMUA_Achr4P10650_001	Banana	mitochondrion	44.71	60.35
TraesCSU01G003600.1	Wheat	plastid	54.54	57.38
TraesCS1D01G335500.1	Wheat	plastid	54.54	57.33
TraesCS1B01G346400.1	Wheat	plastid	54.63	57.25
TraesCS1D01G335400.1	Wheat	plastid	54.63	57.25
EER91614	Sorghum	plasma membrane	54.16	57.21
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	54.07	57.0
HORVU1Hr1G076950.3	Barley	plastid	54.72	56.91
TraesCS1A01G332800.1	Wheat	plastid	54.44	56.84
Os10t0418100-01	Rice	golgi	54.44	56.23
PGSC0003DMT400093936	Potato	plasma membrane	63.7	55.23
TraesCS1D01G066500.1	Wheat	mitochondrion	43.03	54.5
HORVU0Hr1G016220.1	Barley	peroxisome, plasma membrane	42.19	52.08
VIT_11s0052g00320.t01	Wine grape	plasma membrane	50.7	50.19
Zm00001d043925_P001	Maize	plasma membrane	28.91	49.2
VIT_09s0018g02130.t01	Wine grape	plasma membrane	50.98	48.02
TraesCS4B01G007200.1	Wheat	cytosol, peroxisome, plasma membrane	41.72	46.03
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	87.18	45.44
VIT_05s0020g04270.t01	Wine grape	plasma membrane	75.68	45.27
VIT_18s0001g09150.t01	Wine grape	plasma membrane	42.0	44.11
VIT_07s0129g00180.t01	Wine grape	plasma membrane	41.63	43.67
VIT_13s0158g00360.t01	Wine grape	plasma membrane	42.0	43.34
VIT_08s0007g08960.t01	Wine grape	plasma membrane	40.88	42.3
TraesCS1A01G161100.1	Wheat	mitochondrion	29.28	42.24
VIT_05s0020g04220.t01	Wine grape	plastid	81.2	42.22
VIT_07s0129g00110.t01	Wine grape	plasma membrane	20.77	41.5
VIT_00s0691g00010.t01	Wine grape	plasma membrane	29.65	40.69
VIT_00s0463g00030.t01	Wine grape	plasma membrane	34.33	36.12
VIT_06s0004g03900.t01	Wine grape	plasma membrane	26.66	26.86
VIT_15s0046g00040.t01	Wine grape	plasma membrane	26.1	26.55
VIT_08s0040g02830.t01	Wine grape	plasma membrane	26.29	26.43
VIT_18s0001g08850.t01	Wine grape	plasma membrane	22.26	25.67

Protein Annotations

Gene3D:1.20.1110.10	EntrezGene:100242476	wikigene:100242476	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10
Gene3D:3.40.50.1000	EMBL:AM466557	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N
InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ProteinID:CAN74839	ProteinID:CAN74839.1	ProteinID:CCB50470	ProteinID:CCB50470.1
UniProt:F6HDU9	EMBL:FN595749	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005388	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006811	GO:GO:0006816	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0043231	GO:GO:0070588	GO:GO:0099132
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	EntrezGene:LOC100242476	wikigene:LOC100242476
InterPro:P-type_ATPase_IIB	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119
PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR24093	PANTHER:PTHR24093:SF414	InterPro:P_typ_ATPase	SMART:SM00831
SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517
TMHMM:TMhelix	UniParc:UPI000210AA21	ArrayExpress:VIT_05s0020g04280	EnsemblPlantsGene:VIT_05s0020g04280	EnsemblPlants:VIT_05s0020g04280.t01	RefSeq:XP_002279593
RefSeq:XP_002279593.1	SEG:seg	:	:	:	:

Description

Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HDU9]

Coordinates

chr5:-:5997101..6009831

Molecular Weight (calculated)

117806.0 Da

IEP (calculated)

6.518

GRAVY (calculated)

0.061

Length

1069 amino acids

Sequence
(BLAST)

0001: MGVPSSFSSS CNTGLQFSFP SFFFLSSCCI ESILDVPATL SKPNKKWHSA FATIYCSRAL HSLLNKKKSS KLPLSTPSFV VVSVEPHVAF SNIDHTSLTA
0101: VVKEKNLDQL RELGGVEGVA DALKTDTKNG IHGAVEDVAE RQETFGSNTY PRPPTKSFFY FVLEAFKDLT ILILLACATL SLGFGIKEHG LKEGWYDGGS
0201: IFVAVFLVIS VSAVSNFRQN RQFEKLSKVS NNIEVEVVRD GHRQKISIFE IVVGDVVCLK IGDQVPADGL FLDGHSLQVD ESSMTGESDH VQVNSTQNPF
0301: LFSGTKVADG YAQMLVTSVG MNTIWGEMMS TISRNINEQT PLQARLNKLT SSIGKVGLAI AFLVLVVLVV RYFTRNTEDE NGNQEFYGSK TKADDIVNAM
0401: VRIIAAAVTI VVVAIPEGLP LAVTLTLAYS MKKMMADQAM VRKLPACETM GSATTICTDK TGTLTLNQMK VTEYWLGKEP VEDSSSIASN VLKLIQQGVA
0501: LNTTGSIYRA TSGSEFEFSG SPTEKAILSW AVLELDMDME RLKQNHTILH VEAFNSEKKR SGILMRKKAD NKMHVHWKGA AEMILAMCSS YYDASGSMKD
0601: LDDAERMTFE QIIQGMAASS LRCIAFAHKQ IPEEEQEISE GCQRLTEDSL TLIGLVGIKD PCRPGVRKAV EDCQYAGVNV KMITGDNVFT ARAIATECGI
0701: LRPDRDMNSE AVVEGEVFRK YTPEERMEKV DKICVMARSS PFDKLLMVQC LKLKGHVVAV TGDGTNDAPA LKEADIGLSM GIQGTEVAKE SSDIIILDDN
0801: FASVATVLRW GRCVYNNIQK FIQFQLTVNV AALVINFVAA VSAGEVPLTA VQLLWVNLIM DTLGALALAT EQPTRELMEK PPVGRTEPLI SNIMWRNILA
0901: QALYQIAVLL TLQFRGESIF GVSEKVKNTL IFNTFVLCQV FNEFNARKLE KKNVFKGLHK NKLFLGIIGM TIILQVVMVE FLKKFADTER LNWGQWGACI
1001: GIAAASWPIG WVVKGIPVSD KPFLSYLKWK IRVLDIFPPS LDFNFGIFRS DLDPNFSQKT PKTDIMDGT

Best Arabidopsis Sequence Match ( AT3G22910.1 )
(BLAST)

0001: MRRNVSDHAE KKDKVGVEVL LELPKTLSKS NKKWQLALIK LYCSRTLLNC AKHAIRKPGL FPRSLSYTAI DLDHHHGDDH FKIDTETLND LVKNKNQEKL
0101: ESLGGPNGLV SALKSNTRLG INEEGDEIQR RRSTFGSNTY TRQPSKGLFH FVVEAFKDLT ILILLGCATL SLGFGIKEHG LKEGWYDGGS IFVAVFLVVA
0201: VSAVSNFRQN RQFDKLSKVS SNIKIDVVRN GRRQEISIFD IVVGDIVCLN IGDQVPADGV FVEGHLLHVD ESSMTGESDH VEVSLTGNTF LFSGTKIADG
0301: FGKMAVTSVG MNTAWGQMMS HISRDTNEQT PLQSRLDKLT SSIGKVGLLV AFLVLLVLLI RYFTGTTKDE SGNREYNGKT TKSDEIVNAV VKMVAAAVTI
0401: IVVAIPEGLP LAVTLTLAYS MKRMMKDNAM VRKLSACETM GSATVICTDK TGTLTLNQMK VTDFWFGLES GKASSVSQRV VELFHQGVAM NTTGSVFKAK
0501: AGTEYEFSGS PTEKAILSWA VEELEMGMEK VIEEHDVVHV EGFNSEKKRS GVLMKKKGVN TENNVVHWKG AAEKILAMCS TFCDGSGVVR EMKEDDKIQF
0601: EKIIQSMAAK SLRCIAFAYS EDNEDNKKLK EEKLSLLGII GIKDPCRPGV KKAVEDCQFA GVNIKMITGD NIFTARAIAV ECGILTPEDE MNSEAVLEGE
0701: KFRNYTQEER LEKVERIKVM ARSSPFDKLL MVKCLKELGH VVAVTGDGTN DAPALKEADI GLSMGIQGTE VAKESSDIVI LDDNFASVAT VLKWGRCVYN
0801: NIQKFIQFQL TVNVAALVIN FVAAVSAGDV PLTAVQLLWV NLIMDTLGAL ALATEKPTND LMKKKPIGRV APLITNIMWR NLLAQAFYQI SVLLVLQFRG
0901: RSIFNVTEKV KNTLIFNTFV LCQVFNEFNA RSLEKKNVFK GLHKNRLFIG IIVVTVVLQV VMVEFLKRFA DTERLNLGQW GVCIAIAAAS WPIGWLVKSV
1001: PVPERHFFSY LKWKKRS

Arabidopsis Description

ACA13Putative calcium-transporting ATPase 13, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.