Factsheet for Zm00001d043925_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, secretory
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d011721_P001	plasma membrane
Zm00001d014769_P001	plasma membrane
Zm00001d014793_P001	plasma membrane
Zm00001d043634_P001	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G63380.1	Zm00001d014793_P001	AT1G75820.1	22535420
AT3G63380.1	Zm00001d011721_P001	AT4G39400.1	22535420
AT3G63380.1	Zm00001d014769_P001	AT4G39400.1	22535420
AT3G63380.1	Zm00001d043634_P001	AT4G39400.1	22535420

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	77.71	48.13
EER91614	Sorghum	plasma membrane	74.36	46.15
TraesCS1D01G066500.1	Wheat	mitochondrion	58.6	43.6
PGSC0003DMT400096782	Potato	plasma membrane	44.75	43.36
TraesCSU01G003600.1	Wheat	plastid	66.4	41.04
TraesCS1A01G332800.1	Wheat	plastid	66.72	40.92
TraesCS1D01G335500.1	Wheat	plastid	66.24	40.9
TraesCS1B01G346400.1	Wheat	plastid	65.92	40.59
TraesCS1D01G335400.1	Wheat	plastid	65.92	40.59
HORVU1Hr1G076950.3	Barley	plastid	66.4	40.56
Os10t0418100-01	Rice	golgi	66.72	40.48
VIT_05s0020g04360.t01	Wine grape	plasma membrane	44.27	38.34
HORVU0Hr1G016220.1	Barley	peroxisome, plasma membrane	52.07	37.76
KRH67272	Soybean	peroxisome, plasma membrane	50.96	34.93
Solyc09g082890.1.1	Tomato	peroxisome, plasma membrane	20.7	33.85
PGSC0003DMT400089336	Potato	plasma membrane	47.77	33.15
KRH29171	Soybean	plasma membrane	48.73	32.18
TraesCS4B01G007200.1	Wheat	cytosol, peroxisome, plasma membrane	49.52	32.09
KRH41701	Soybean	mitochondrion	50.16	31.95
VIT_05s0020g04240.t01	Wine grape	plasma membrane	48.73	31.94
CDY10680	Canola	plasma membrane	50.32	31.16
Bra033900.1-P	Field mustard	plasma membrane	50.32	31.13
GSMUA_Achr7P25650_001	Banana	plasma membrane	36.62	31.08
GSMUA_Achr4P10650_001	Banana	mitochondrion	39.17	31.06
CDY40822	Canola	plasma membrane	50.16	31.0
Bra023790.1-P	Field mustard	plasma membrane	50.16	30.97
CDY34219	Canola	plasma membrane	50.0	30.88
CDY10319	Canola	plasma membrane	50.16	30.73
VIT_05s0020g04390.t01	Wine grape	plastid	49.36	30.63
AT3G22910.1	Thale cress	plasma membrane	49.52	30.58
VIT_05s0020g04380.t01	Wine grape	plasma membrane	48.89	30.34
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	50.48	30.19
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	48.41	30.19
VIT_05s0020g04300.t01	Wine grape	plasma membrane	50.16	30.06
KRG95593	Soybean	plasma membrane	50.64	29.75
KRG93759	Soybean	plastid	48.41	29.54
VIT_14s0030g02080.t01	Wine grape	plasma membrane	49.84	29.42
PGSC0003DMT400050008	Potato	plasma membrane	46.82	29.22
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	49.36	29.08
VIT_05s0020g04280.t01	Wine grape	plastid	49.2	28.91
VIT_14s0030g02110.t01	Wine grape	plasma membrane	45.38	28.82
AT3G63380.1	Thale cress	plasma membrane	47.29	28.75
CDX93910	Canola	plasma membrane	47.13	28.65
PGSC0003DMT400089589	Potato	plasma membrane	34.71	27.7
Zm00001d031340_P001	Maize	cytosol	34.71	27.59
VIT_19s0014g01620.t01	Wine grape	plasma membrane	23.09	25.13
PGSC0003DMT400093936	Potato	plasma membrane	47.61	24.25
Zm00001d002396_P012	Maize	nucleus, plasma membrane, plastid	41.72	24.15
Zm00001d052856_P001	Maize	plasma membrane	37.58	23.14
Zm00001d020985_P002	Maize	cytosol, peroxisome, plasma membrane	41.24	22.64
Zm00001d030893_P004	Maize	plasma membrane	36.62	22.55
Zm00001d028093_P001	Maize	plasma membrane	37.74	22.44
Zm00001d015446_P016	Maize	plasma membrane	40.13	22.42
TraesCS1A01G161100.1	Wheat	mitochondrion	26.43	22.4
Zm00001d026253_P002	Maize	peroxisome, plasma membrane, plastid	39.17	22.28
Zm00001d033334_P001	Maize	plastid	35.83	21.76
Zm00001d052457_P001	Maize	plasma membrane	34.08	21.59
Zm00001d023258_P002	Maize	plasma membrane	35.67	21.41
Zm00001d031543_P005	Maize	cytosol	37.58	21.24
Zm00001d042164_P002	Maize	cytosol, nucleus, plasma membrane	34.71	20.86
Zm00001d011896_P001	Maize	cytosol, nucleus, plasma membrane	34.71	20.82
PGSC0003DMT400094259	Potato	plasma membrane	29.3	20.42
Zm00001d038576_P001	Maize	plasma membrane, plastid	33.76	20.36
PGSC0003DMT400048740	Potato	plastid	31.37	19.16
Solyc09g082870.1.1	Tomato	plasma membrane	31.21	18.18
VIT_05s0020g04270.t01	Wine grape	plasma membrane	46.18	16.23
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	49.52	15.16
VIT_05s0020g04220.t01	Wine grape	plastid	49.36	15.08
Zm00001d033886_P001	Maize	mitochondrion	22.93	14.91
Zm00001d028687_P001	Maize	extracellular, mitochondrion	24.2	14.33
Zm00001d047769_P001	Maize	plasma membrane	24.2	14.31
Zm00001d011013_P001	Maize	plasma membrane	23.25	13.88
PGSC0003DMT400062826	Potato	plasma membrane	5.1	9.17
PGSC0003DMT400097702	Potato	plasma membrane	4.78	8.4
Zm00001d031341_P001	Maize	plasma membrane	3.34	8.17
PGSC0003DMT400096083	Potato	plasma membrane	3.98	8.04
Solyc01g097400.1.1	Tomato	cytosol	3.03	6.91
VIT_05s0020g04350.t01	Wine grape	plasma membrane	2.87	5.66

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	UniProt:A0A1D6NG99
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:HAD_sf	InterPro:IPR023214
InterPro:IPR023299	ProteinID:ONM39463.1	PFAM:PF00122	PFAM:PF13246	PRINTS:PR00119	PRINTS:PR00121
ScanProsite:PS00154	PANTHER:PTHR24093	PANTHER:PTHR24093:SF292	InterPro:P_typ_ATPase	SUPFAM:SSF81653	SUPFAM:SSF81660
SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TMHMM:TMhelix	UniParc:UPI0002208595	EnsemblPlantsGene:Zm00001d043925	EnsemblPlants:Zm00001d043925_P001
EnsemblPlants:Zm00001d043925_T001	SEG:seg	:	:	:	:

Description

Putative calcium-transporting ATPase 13 plasma membrane-type

Coordinates

chr3:+:213996526..213998950

Molecular Weight (calculated)

67906.5 Da

IEP (calculated)

8.882

GRAVY (calculated)

-0.137

Length

628 amino acids

Sequence
(BLAST)

001: MIPVLGCTLG FGIKEHGLKD GWYDGIGIFL VVFLVAAVSA VSNHGQARRF DRLATESDNI VVAVVRGGRR QELSIFDVVV GDVVVLNIGD AVSADGVFMK
101: GHALQVDESS MTGESHPVDI DAEESPFLAS GFKVIDGCGH MLVTAVGTGT AWGEMMGSIT REKTEPTPLQ ERLEALTSSI GKVGIAVAVL VFAVLTARHF
201: TGSTRDEQGN PTFDRHHAIT IIVVAIPEGL PLAVTLTLAF SMKRMVKEHA LVCTLSACET MGSVTAICTD KTGTLTLNQM KVTEFWVGTD RPKAAATVAA
301: AVVSFLRQGA GLNTTRSVYK PNNVSPPEIS GNPTEKALLS WAVAELGMDA DALKRSCKVL HVEAFNSDKK RSCVMIRDNA TGTLTAHWKG AAEMVLASCS
401: AYVGSDGAAR ELDAGKRRKL QEIISGMAAA SLRCIAFAYK HVDSEHSKID DEGLTLLGFV GLKDPCRPEV THLHGQERSG RISSAWAWAA PVGSGPPLDP
501: PLVEHLDPRL PASRPLGYVH RIWIPRERVA RWWRRCWGRG GGGKGRRGGG ESSRRWWRVI PHRERRERTE VGQLRTGRPT HGVNVGAARV GDVGRQRLQS
601: DKREEGRWAA HWAAGPHVQL LGYTNDRT

Best Arabidopsis Sequence Match ( AT3G22910.1 )
(BLAST)

0001: MRRNVSDHAE KKDKVGVEVL LELPKTLSKS NKKWQLALIK LYCSRTLLNC AKHAIRKPGL FPRSLSYTAI DLDHHHGDDH FKIDTETLND LVKNKNQEKL
0101: ESLGGPNGLV SALKSNTRLG INEEGDEIQR RRSTFGSNTY TRQPSKGLFH FVVEAFKDLT ILILLGCATL SLGFGIKEHG LKEGWYDGGS IFVAVFLVVA
0201: VSAVSNFRQN RQFDKLSKVS SNIKIDVVRN GRRQEISIFD IVVGDIVCLN IGDQVPADGV FVEGHLLHVD ESSMTGESDH VEVSLTGNTF LFSGTKIADG
0301: FGKMAVTSVG MNTAWGQMMS HISRDTNEQT PLQSRLDKLT SSIGKVGLLV AFLVLLVLLI RYFTGTTKDE SGNREYNGKT TKSDEIVNAV VKMVAAAVTI
0401: IVVAIPEGLP LAVTLTLAYS MKRMMKDNAM VRKLSACETM GSATVICTDK TGTLTLNQMK VTDFWFGLES GKASSVSQRV VELFHQGVAM NTTGSVFKAK
0501: AGTEYEFSGS PTEKAILSWA VEELEMGMEK VIEEHDVVHV EGFNSEKKRS GVLMKKKGVN TENNVVHWKG AAEKILAMCS TFCDGSGVVR EMKEDDKIQF
0601: EKIIQSMAAK SLRCIAFAYS EDNEDNKKLK EEKLSLLGII GIKDPCRPGV KKAVEDCQFA GVNIKMITGD NIFTARAIAV ECGILTPEDE MNSEAVLEGE
0701: KFRNYTQEER LEKVERIKVM ARSSPFDKLL MVKCLKELGH VVAVTGDGTN DAPALKEADI GLSMGIQGTE VAKESSDIVI LDDNFASVAT VLKWGRCVYN
0801: NIQKFIQFQL TVNVAALVIN FVAAVSAGDV PLTAVQLLWV NLIMDTLGAL ALATEKPTND LMKKKPIGRV APLITNIMWR NLLAQAFYQI SVLLVLQFRG
0901: RSIFNVTEKV KNTLIFNTFV LCQVFNEFNA RSLEKKNVFK GLHKNRLFIG IIVVTVVLQV VMVEFLKRFA DTERLNLGQW GVCIAIAAAS WPIGWLVKSV
1001: PVPERHFFSY LKWKKRS

Arabidopsis Description

ACA13Putative calcium-transporting ATPase 13, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.