Factsheet for VIT_05s0020g04240.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
endoplasmic reticulum 3
plasma membrane 5
extracellular 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	endoplasmic reticulum
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400096083	Potato	plasma membrane	25.26	77.81
PGSC0003DMT400062826	Potato	plasma membrane	28.29	77.65
VIT_05s0020g04390.t01	Wine grape	plastid	79.65	75.4
VIT_05s0020g04380.t01	Wine grape	plasma membrane	79.12	74.9
VIT_05s0020g04300.t01	Wine grape	plasma membrane	80.79	73.86
VIT_19s0014g01620.t01	Wine grape	plasma membrane	44.15	73.31
PGSC0003DMT400097702	Potato	plasma membrane	26.72	71.71
VIT_05s0020g04280.t01	Wine grape	plastid	79.75	71.47
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	76.62	68.86
VIT_05s0020g04360.t01	Wine grape	plasma membrane	50.21	66.34
VIT_05s0020g04350.t01	Wine grape	plasma membrane	21.92	66.04
KRG93759	Soybean	plastid	70.77	65.89
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	69.52	63.43
CDY40822	Canola	plasma membrane	66.81	62.99
CDY34219	Canola	plasma membrane	66.81	62.93
Bra023790.1-P	Field mustard	plasma membrane	66.7	62.83
CDY10680	Canola	plasma membrane	66.49	62.82
Bra033900.1-P	Field mustard	plasma membrane	66.18	62.46
AT3G22910.1	Thale cress	plasma membrane	66.28	62.44
PGSC0003DMT400096782	Potato	plasma membrane	42.07	62.19
CDY10319	Canola	plasma membrane	66.08	61.76
VIT_14s0030g02110.t01	Wine grape	plasma membrane	63.36	61.38
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	62.32	59.28
VIT_14s0030g02080.t01	Wine grape	plasma membrane	65.34	58.83
PGSC0003DMT400089589	Potato	plasma membrane	48.23	58.7
GSMUA_Achr7P25650_001	Banana	plasma membrane	43.74	56.62
PGSC0003DMT400089336	Potato	plasma membrane	52.71	55.8
GSMUA_Achr4P10650_001	Banana	mitochondrion	44.89	54.29
Solyc09g082890.1.1	Tomato	peroxisome, plasma membrane	21.4	53.39
TraesCS1B01G346400.1	Wheat	plastid	56.47	53.04
TraesCSU01G003600.1	Wheat	plastid	56.16	52.95
TraesCS1D01G335500.1	Wheat	plastid	56.16	52.9
EER91614	Sorghum	plasma membrane	55.74	52.77
TraesCS1D01G335400.1	Wheat	plastid	56.16	52.75
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	55.64	52.56
TraesCS1A01G332800.1	Wheat	plastid	56.05	52.44
HORVU1Hr1G076950.3	Barley	plastid	55.95	52.14
Os10t0418100-01	Rice	golgi	56.16	51.98
PGSC0003DMT400093936	Potato	plasma membrane	66.08	51.34
TraesCS1D01G066500.1	Wheat	mitochondrion	44.68	50.71
HORVU0Hr1G016220.1	Barley	peroxisome, plasma membrane	45.3	50.12
Zm00001d043925_P001	Maize	plasma membrane	31.94	48.73
VIT_11s0052g00320.t01	Wine grape	plasma membrane	52.09	46.2
VIT_09s0018g02130.t01	Wine grape	plasma membrane	52.4	44.23
TraesCS4B01G007200.1	Wheat	cytosol, peroxisome, plasma membrane	42.9	42.41
VIT_05s0020g04220.t01	Wine grape	plastid	85.39	39.79
VIT_13s0158g00360.t01	Wine grape	plasma membrane	42.9	39.67
VIT_18s0001g09150.t01	Wine grape	plasma membrane	42.07	39.59
VIT_05s0020g04270.t01	Wine grape	plasma membrane	73.59	39.45
VIT_07s0129g00180.t01	Wine grape	plasma membrane	41.23	38.76
VIT_00s0691g00010.t01	Wine grape	plasma membrane	31.42	38.64
VIT_08s0007g08960.t01	Wine grape	plasma membrane	41.65	38.63
TraesCS1A01G161100.1	Wheat	mitochondrion	29.54	38.19
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	79.96	37.35
VIT_07s0129g00110.t01	Wine grape	plasma membrane	19.21	34.39
VIT_00s0463g00030.t01	Wine grape	plasma membrane	34.03	32.09
VIT_06s0004g03900.t01	Wine grape	plasma membrane	28.18	25.45
VIT_08s0040g02830.t01	Wine grape	plasma membrane	27.14	24.46
VIT_15s0046g00040.t01	Wine grape	plasma membrane	26.83	24.45
VIT_18s0001g08850.t01	Wine grape	plasma membrane	23.49	24.27

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	EMBL:AM434298
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf
ProteinID:CAN69357	ProteinID:CAN69357.1	ProteinID:CCB50467	ProteinID:CCB50467.1	UniProt:F6HDU6	EMBL:FN595749
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887
GO:GO:0006810	GO:GO:0006811	GO:GO:0006816	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0043231	GO:GO:0070588	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	InterPro:IPR023299	InterPro:P-type_ATPase_IIB	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690
PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR24093	PANTHER:PTHR24093:SF414
InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01517	TMHMM:TMhelix	UniParc:UPI000210AA1E	ArrayExpress:VIT_05s0020g04240	EnsemblPlantsGene:VIT_05s0020g04240	EnsemblPlants:VIT_05s0020g04240.t01
SEG:seg	:	:	:	:	:

Description

Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HDU6]

Coordinates

chr5:+:5920940..5929802

Molecular Weight (calculated)

105753.0 Da

IEP (calculated)

6.378

GRAVY (calculated)

0.120

Length

958 amino acids

Sequence
(BLAST)

001: MGEVLASVAE TIKNFAVMYL VDITEYESNQ IFAYINMKHP GYLSIQKLSL YYVARRKEEF GSNTYQKPPT KSFLHFVVEA FKDLTILVLL ACATLSVGFG
101: IKEHGVKEGW YDGGSIFLAI FLVISVSAVI NFKQNRQFDK LSKASNNIQV DVVRHGRLQQ ISIFEIVVGD VVCLKIGDQV PADGLFLDGH SLQVDESSMT
201: GENDHVEVNT SLNPFLFSGT KVADGYARML VTSVGMNTTW GEMMSTISHD ANEQTPLQAR LNKLTSSIGK FGLAAAFLVL VLLLVRYFTG NTKDENGNQE
301: FNASKTKAGD IVNAVVGIIA AAITIVVVAI PEGLPLAVTL TLGYSMKRMM ADQVMVRKLS ACETMGFATI ICTDKTGTLT LNQMKVTKFW LGKQPIEAAS
401: SIATDLLELI RQGVALNTTG SIYREPSSSK FEFSGSPTEK AILSWAVLEL GMDMERMKKN YTILHVEAFN SEKKRSGILI RKKADNTIHA HWKGAAEMIL
501: AMCSSYYDAS GSMKDLDDGK RMTFEQTIQG TAASSLRCMA FAHKQIRKEE QEIGEGLQKL KEDSLTLIAL VGIKDPCRPG VRKAVEDCQY AGVNVKMITG
601: DNIFTARAMA TECGILRPGQ EMDSEAVVEG EVFRQYTEEE RMEHVDKILV MAGSSPFDKL LMVECLKKKG HVVAVTGDGT NDAPALQEAD IGLSMGIQGT
701: EVAKESSDII ILDDNFASVA TVLRWGRCVY NNIQKFIQFQ LTLNVAALVI NCVAAASTAE VPLTAFHLLW MNLVMDTLGV LALATDRPTK ELMEKPPVGR
801: AEPLITNIMW RNLLAQALYQ IVVLLTLHFK GQSIFGVNKE KDTLIFNTSV LCQVFNEFNA RELEKKNVFE GIHKNKLFLG IVGLAIILQV VMVEFLNKFA
901: DTERLDWGQW VACIGVAAAS WPIGWLVKCI PVSDKPVLDY LKCYNPMIWC HSTSCLFT

Best Arabidopsis Sequence Match ( AT3G22910.1 )
(BLAST)

0001: MRRNVSDHAE KKDKVGVEVL LELPKTLSKS NKKWQLALIK LYCSRTLLNC AKHAIRKPGL FPRSLSYTAI DLDHHHGDDH FKIDTETLND LVKNKNQEKL
0101: ESLGGPNGLV SALKSNTRLG INEEGDEIQR RRSTFGSNTY TRQPSKGLFH FVVEAFKDLT ILILLGCATL SLGFGIKEHG LKEGWYDGGS IFVAVFLVVA
0201: VSAVSNFRQN RQFDKLSKVS SNIKIDVVRN GRRQEISIFD IVVGDIVCLN IGDQVPADGV FVEGHLLHVD ESSMTGESDH VEVSLTGNTF LFSGTKIADG
0301: FGKMAVTSVG MNTAWGQMMS HISRDTNEQT PLQSRLDKLT SSIGKVGLLV AFLVLLVLLI RYFTGTTKDE SGNREYNGKT TKSDEIVNAV VKMVAAAVTI
0401: IVVAIPEGLP LAVTLTLAYS MKRMMKDNAM VRKLSACETM GSATVICTDK TGTLTLNQMK VTDFWFGLES GKASSVSQRV VELFHQGVAM NTTGSVFKAK
0501: AGTEYEFSGS PTEKAILSWA VEELEMGMEK VIEEHDVVHV EGFNSEKKRS GVLMKKKGVN TENNVVHWKG AAEKILAMCS TFCDGSGVVR EMKEDDKIQF
0601: EKIIQSMAAK SLRCIAFAYS EDNEDNKKLK EEKLSLLGII GIKDPCRPGV KKAVEDCQFA GVNIKMITGD NIFTARAIAV ECGILTPEDE MNSEAVLEGE
0701: KFRNYTQEER LEKVERIKVM ARSSPFDKLL MVKCLKELGH VVAVTGDGTN DAPALKEADI GLSMGIQGTE VAKESSDIVI LDDNFASVAT VLKWGRCVYN
0801: NIQKFIQFQL TVNVAALVIN FVAAVSAGDV PLTAVQLLWV NLIMDTLGAL ALATEKPTND LMKKKPIGRV APLITNIMWR NLLAQAFYQI SVLLVLQFRG
0901: RSIFNVTEKV KNTLIFNTFV LCQVFNEFNA RSLEKKNVFK GLHKNRLFIG IIVVTVVLQV VMVEFLKRFA DTERLNLGQW GVCIAIAAAS WPIGWLVKSV
1001: PVPERHFFSY LKWKKRS

Arabidopsis Description

ACA13Putative calcium-transporting ATPase 13, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.