Factsheet for VIT_05s0020g04260.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 3
cytosol 1
endoplasmic reticulum 1
plasma membrane 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g04380.t01	Wine grape	plasma membrane	79.36	83.6
VIT_05s0020g04390.t01	Wine grape	plastid	79.17	83.4
VIT_05s0020g04300.t01	Wine grape	plasma membrane	79.74	81.11
VIT_05s0020g04280.t01	Wine grape	plastid	79.46	79.23
PGSC0003DMT400062826	Potato	plasma membrane	25.61	78.22
PGSC0003DMT400096083	Potato	plasma membrane	22.7	77.81
VIT_05s0020g04240.t01	Wine grape	plasma membrane	68.86	76.62
VIT_05s0020g04360.t01	Wine grape	plasma membrane	51.41	75.59
VIT_19s0014g01620.t01	Wine grape	plasma membrane	40.06	74.0
KRG93759	Soybean	plastid	70.08	72.59
PGSC0003DMT400097702	Potato	plasma membrane	23.55	70.31
VIT_05s0020g04350.t01	Wine grape	plasma membrane	20.64	69.18
CDY40822	Canola	plasma membrane	65.29	68.5
Bra023790.1-P	Field mustard	plasma membrane	65.29	68.44
CDY34219	Canola	plasma membrane	65.1	68.24
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	67.17	68.19
AT3G22910.1	Thale cress	plasma membrane	64.63	67.75
CDY10680	Canola	plasma membrane	63.98	67.26
Bra033900.1-P	Field mustard	plasma membrane	63.88	67.09
CDY10319	Canola	plasma membrane	63.88	66.44
PGSC0003DMT400096782	Potato	plasma membrane	39.87	65.59
VIT_14s0030g02110.t01	Wine grape	plasma membrane	60.41	65.12
VIT_14s0030g02080.t01	Wine grape	plasma membrane	63.6	63.72
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	60.04	63.56
Solyc09g082890.1.1	Tomato	peroxisome, plasma membrane	22.8	63.28
PGSC0003DMT400089589	Potato	plasma membrane	46.53	63.02
GSMUA_Achr7P25650_001	Banana	plasma membrane	42.21	60.81
GSMUA_Achr4P10650_001	Banana	mitochondrion	44.56	59.97
PGSC0003DMT400089336	Potato	plasma membrane	49.81	58.67
TraesCS1D01G335500.1	Wheat	plastid	54.32	56.93
TraesCSU01G003600.1	Wheat	plastid	54.22	56.89
TraesCS1B01G346400.1	Wheat	plastid	54.41	56.86
HORVU1Hr1G076950.3	Barley	plastid	54.6	56.61
TraesCS1D01G335400.1	Wheat	plastid	54.03	56.47
Os10t0418100-01	Rice	golgi	54.78	56.43
TraesCS1A01G332800.1	Wheat	plastid	54.13	56.35
EER91614	Sorghum	plasma membrane	53.38	56.23
TraesCS1D01G066500.1	Wheat	mitochondrion	44.18	55.81
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	53.0	55.72
PGSC0003DMT400093936	Potato	plasma membrane	61.63	53.28
VIT_05s0020g04270.t01	Wine grape	plasma membrane	86.77	51.76
HORVU0Hr1G016220.1	Barley	peroxisome, plasma membrane	41.74	51.39
Zm00001d043925_P001	Maize	plasma membrane	29.08	49.36
VIT_11s0052g00320.t01	Wine grape	plasma membrane	49.72	49.07
VIT_09s0018g02130.t01	Wine grape	plasma membrane	49.91	46.87
TraesCS4B01G007200.1	Wheat	cytosol, peroxisome, plasma membrane	41.65	45.82
VIT_18s0001g09150.t01	Wine grape	plasma membrane	40.99	42.93
VIT_07s0129g00180.t01	Wine grape	plasma membrane	40.43	42.3
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	81.33	42.27
VIT_05s0020g04220.t01	Wine grape	plastid	81.52	42.27
VIT_13s0158g00360.t01	Wine grape	plasma membrane	40.53	41.7
TraesCS1A01G161100.1	Wheat	mitochondrion	28.8	41.43
VIT_08s0007g08960.t01	Wine grape	plasma membrane	39.96	41.24
VIT_00s0691g00010.t01	Wine grape	plasma membrane	28.99	39.67
VIT_07s0129g00110.t01	Wine grape	plasma membrane	19.79	39.44
VIT_00s0463g00030.t01	Wine grape	plasma membrane	33.3	34.94
VIT_06s0004g03900.t01	Wine grape	plasma membrane	26.17	26.3
VIT_08s0040g02830.t01	Wine grape	plasma membrane	26.08	26.15
VIT_18s0001g08850.t01	Wine grape	plasma membrane	22.33	25.67
VIT_15s0046g00040.t01	Wine grape	plasma membrane	25.05	25.4

Protein Annotations

Gene3D:1.20.1110.10	EntrezGene:100252717	wikigene:100252717	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10
Gene3D:3.40.50.1000	EMBL:AM450115	EMBL:AM467621	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C
InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ProteinID:CAN74276	ProteinID:CAN74276.1	ProteinID:CAN79198
ProteinID:CAN79198.1	ProteinID:CCB50468	ProteinID:CCB50468.1	ncoils:Coil	UniProt:F6HDU7	EMBL:FN595749
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887
GO:GO:0006810	GO:GO:0006811	GO:GO:0006816	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0043231	GO:GO:0070588	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	InterPro:IPR023299	EntrezGene:LOC100252717	wikigene:LOC100252717	InterPro:P-type_ATPase_IIB	PFAM:PF00122
PFAM:PF00689	PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154
PANTHER:PTHR24093	PANTHER:PTHR24093:SF414	InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660
SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517	TMHMM:TMhelix	UniParc:UPI000210AA1F	ArrayExpress:VIT_05s0020g04260
EnsemblPlantsGene:VIT_05s0020g04260	EnsemblPlants:VIT_05s0020g04260.t01	RefSeq:XP_002279567	RefSeq:XP_002279567.1	SEG:seg	:

Description

Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HDU7]

Coordinates

chr5:-:5954823..5960787

Molecular Weight (calculated)

117695.0 Da

IEP (calculated)

8.305

GRAVY (calculated)

0.075

Length

1066 amino acids

Sequence
(BLAST)

0001: MSYFYIKKIL NLKTKVYRYP FCILKRMSNN LDLSLVCMES LLEVPSTLSK PKKRWHLAFA TIYCSRALYS LLNHPVSNNK KRSKTLLTSP PSFVILNVEP
0101: QHGFSNFDQH SLTQIVKHKS LTQLLELGGV EGVAIILETD VKNGIHGAVE DVTRRRKAFG SNAYRKPPTK SFFYFVVEAI KDVTILILVA CATLSLGFGI
0201: KEQGPKEGWY DGGSILVAVF LVISVSAVSN FRQNRQFDKL SKVSDNIQVD VVRDGRRQQI SIFEVVVGDV VCLKIGDQVP ADGLFLDGHS LQVDESSMTG
0301: ESDHVEVNTS LNPFLFSGTK VADGYARMVV TSVGMNTTWG EMMSTISRDT NEQTPLQARL NKLTSSIGKV GLAVASLVLL VLLVRYFTGH TEDENGNQEF
0401: HGNLTKADDV VNAVVRIIAV AVTIVVVAIP EGLPLAVTLT LAYSMKRMMA EQAMVRRLSA CETMGSATTI CTDKTGTLTL NQMKVTKFWL GQDPIREDAS
0501: SSIATNVLKL IQQGVALNTT GSINMATSGS RYEFSGSPTE KAILSWAVLE LNMDMEELKQ TCTILQVEAF NSEKKRSGVA LRSKADNKVH VHWKGAAEMI
0601: LAMCSTYYDA SGSMRDLDHV ERTTFEQIIQ GMAASSLRCI AFAHSQLPEE EHEIREATQK LKEDSLTLIG LVGIKDPCRA GVRKAVEDCQ YAGVNVKMIT
0701: GDNIFTARAI ATECGILRPD QDMNNEAVVE GEVFRQYTPE ERMEKVDKIR VMARSSPLDK LLMVQCLKQK GHVVAVTGDG ANDAPALKAA DIGLSMGIQG
0801: TEVAKESSDI IILDDNFASV ATVLRWGRCV YNNIQKFIQF QLTVNVAALV INFVAAVSAG EVPLTAVQLL WVNLIMDTLG ALALATEQPT KELMEKPPMG
0901: RTEPLISNIM WRNLLAQALY QIAVLLTLQF KGESIFGVSE KVKDTLIFNT FVLCQVFNEF NARKLEKKNV FKGLHKNKLF LGIIGITIIL QVVMVEFLKK
1001: FADTERLDWG QWGACIGIAA ASWPIGWVVK CVPVSDKPFK LSKVVGISLQ RYKLLFLSLG PHKCNM

Best Arabidopsis Sequence Match ( AT3G22910.1 )
(BLAST)

0001: MRRNVSDHAE KKDKVGVEVL LELPKTLSKS NKKWQLALIK LYCSRTLLNC AKHAIRKPGL FPRSLSYTAI DLDHHHGDDH FKIDTETLND LVKNKNQEKL
0101: ESLGGPNGLV SALKSNTRLG INEEGDEIQR RRSTFGSNTY TRQPSKGLFH FVVEAFKDLT ILILLGCATL SLGFGIKEHG LKEGWYDGGS IFVAVFLVVA
0201: VSAVSNFRQN RQFDKLSKVS SNIKIDVVRN GRRQEISIFD IVVGDIVCLN IGDQVPADGV FVEGHLLHVD ESSMTGESDH VEVSLTGNTF LFSGTKIADG
0301: FGKMAVTSVG MNTAWGQMMS HISRDTNEQT PLQSRLDKLT SSIGKVGLLV AFLVLLVLLI RYFTGTTKDE SGNREYNGKT TKSDEIVNAV VKMVAAAVTI
0401: IVVAIPEGLP LAVTLTLAYS MKRMMKDNAM VRKLSACETM GSATVICTDK TGTLTLNQMK VTDFWFGLES GKASSVSQRV VELFHQGVAM NTTGSVFKAK
0501: AGTEYEFSGS PTEKAILSWA VEELEMGMEK VIEEHDVVHV EGFNSEKKRS GVLMKKKGVN TENNVVHWKG AAEKILAMCS TFCDGSGVVR EMKEDDKIQF
0601: EKIIQSMAAK SLRCIAFAYS EDNEDNKKLK EEKLSLLGII GIKDPCRPGV KKAVEDCQFA GVNIKMITGD NIFTARAIAV ECGILTPEDE MNSEAVLEGE
0701: KFRNYTQEER LEKVERIKVM ARSSPFDKLL MVKCLKELGH VVAVTGDGTN DAPALKEADI GLSMGIQGTE VAKESSDIVI LDDNFASVAT VLKWGRCVYN
0801: NIQKFIQFQL TVNVAALVIN FVAAVSAGDV PLTAVQLLWV NLIMDTLGAL ALATEKPTND LMKKKPIGRV APLITNIMWR NLLAQAFYQI SVLLVLQFRG
0901: RSIFNVTEKV KNTLIFNTFV LCQVFNEFNA RSLEKKNVFK GLHKNRLFIG IIVVTVVLQV VMVEFLKRFA DTERLNLGQW GVCIAIAAAS WPIGWLVKSV
1001: PVPERHFFSY LKWKKRS

Arabidopsis Description

ACA13Putative calcium-transporting ATPase 13, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.