Factsheet for VIT_15s0046g00040.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
endoplasmic reticulum 3
peroxisome 1
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
EpiLoc:	endoplasmic reticulum
MultiLoc:	peroxisome
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400000352	Potato	peroxisome	85.35	85.59
KRH06423	Soybean	plasma membrane	85.16	84.67
Solyc01g096190.2.1	Tomato	plasma membrane	84.21	84.45
KRH47857	Soybean	plasma membrane	84.4	82.67
AT4G00900.1	Thale cress	plasma membrane	80.11	79.89
Bra037404.1-P	Field mustard	plasma membrane	78.88	78.65
CDY51719	Canola	plasma membrane	78.88	78.65
CDY07153	Canola	plasma membrane	78.78	78.56
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	28.16	76.49
GSMUA_AchrUn_...	Banana	peroxisome, plasma membrane, vacuole	35.78	69.76
GSMUA_Achr1P04000_001	Banana	plasma membrane	60.89	69.34
VIT_08s0040g02830.t01	Wine grape	plasma membrane	67.55	66.79
VIT_06s0004g03900.t01	Wine grape	plasma membrane	66.98	66.35
VIT_18s0001g08850.t01	Wine grape	plasma membrane	41.48	47.03
VIT_18s0001g09150.t01	Wine grape	plasma membrane	27.12	28.0
VIT_19s0014g01620.t01	Wine grape	plasma membrane	15.22	27.73
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	26.26	27.41
VIT_07s0129g00180.t01	Wine grape	plasma membrane	26.45	27.28
VIT_05s0020g04380.t01	Wine grape	plasma membrane	26.26	27.27
VIT_05s0020g04390.t01	Wine grape	plastid	26.26	27.27
VIT_13s0158g00360.t01	Wine grape	plasma membrane	26.55	26.93
VIT_08s0007g08960.t01	Wine grape	plasma membrane	26.45	26.91
VIT_05s0020g04240.t01	Wine grape	plasma membrane	24.45	26.83
VIT_14s0030g02110.t01	Wine grape	plasma membrane	25.02	26.59
VIT_05s0020g04350.t01	Wine grape	plasma membrane	7.99	26.42
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	26.17	26.19
VIT_05s0020g04280.t01	Wine grape	plastid	26.55	26.1
VIT_05s0020g04300.t01	Wine grape	plasma membrane	25.98	26.05
VIT_14s0030g02080.t01	Wine grape	plasma membrane	26.17	25.85
VIT_11s0052g00320.t01	Wine grape	plasma membrane	26.26	25.56
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	25.4	25.05
VIT_09s0018g02130.t01	Wine grape	plasma membrane	26.55	24.58
VIT_05s0020g04360.t01	Wine grape	plasma membrane	15.89	23.03
VIT_07s0129g00110.t01	Wine grape	plasma membrane	11.51	22.62
VIT_00s0691g00010.t01	Wine grape	plasma membrane	16.18	21.82
VIT_00s0463g00030.t01	Wine grape	plasma membrane	17.79	18.41
VIT_05s0020g04270.t01	Wine grape	plasma membrane	24.45	14.38
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	26.07	13.36
VIT_05s0020g04220.t01	Wine grape	plastid	25.5	13.04

Protein Annotations

Gene3D:1.20.1110.10	EntrezGene:100253574	wikigene:100253574	Gene3D:2.60.120.1500	Gene3D:2.70.150.10	MapMan:24.1.2.2.1
Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	EMBL:AM431228	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C
InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ProteinID:CAN66975	ProteinID:CAN66975.1	ProteinID:CCB62562
ProteinID:CCB62562.1	UniProt:F6I6G6	EMBL:FN596755	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	EntrezGene:LOC100253574	wikigene:LOC100253574
PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00121
ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF36	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGR:TC60759	TIGRFAMs:TIGR01494	TMHMM:TMhelix
UniParc:UPI0002109C23	ArrayExpress:VIT_15s0046g00040	EnsemblPlantsGene:VIT_15s0046g00040	EnsemblPlants:VIT_15s0046g00040.t01	RefSeq:XP_002264585	RefSeq:XP_002264585.2
RefSeq:XP_010661979.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr15:-:17129316..17134097

Molecular Weight (calculated)

116596.0 Da

IEP (calculated)

5.613

GRAVY (calculated)

0.103

Length

1051 amino acids

Sequence
(BLAST)

0001: MEENPFPAWS WSVEQCLKEY NVRIDKGLSS YEVEKRRERY GWNELTKEKG KPLWRLVLEQ FDDMLVKILL VAAFISFILA YLHGDECEEL GFEAYVEPFV
0101: IVLILVLNAI VGVIQETNAE KALEALKEMQ CESGKVLRDG YFVPDLPARE LVPGDIVELR VGDKVPADMR VAALKTSTLR VEQSSLTGEA MPVLKGTSPI
0201: FMDDCELQAK ENMVFAGTTV VNGSCICIVV NTGMNTEIGK IQTQIHEASL EESNTPLKKK LDEFGNRLTT VIGLVCLIVW VINYKYFLTW DLVNGWPTNF
0301: RFSFEKCTYY FKIAVALAVA AIPEGLPAVI TTCLALGTRK MAQKNAIVRK LPSVETLGCT TVICSDKTGT LTTNQMSATE FFTLGGKITS SRIFHVEGST
0401: YDPKDGGIVD WNCYNMDANL QAMAEICAVC NDAGIFCNGR LFRATGLPTE AALKVLVEKM GVPDVKARNK IRDTQLAASY LIDRSTVKLG CCEWWTKRSK
0501: RVATLEFDRI RKSMSVLVRE PTGRNRLLVK GAVESLLERS SHVQLADGSL VPLDEPYRQL LLLRNLEMSS KGLRCLGLAY KDDLGEFSDY YTETHPAHKK
0601: LLDPACYSSI ESELVFVGVV GLRDPPRDEV HKAIDDCREA GIKVMVITGD NKSTAEAICQ EIRLFSEGEQ LKGASFTGKE FMALSPSEQI EILSKPGGKV
0701: FSRAEPRHKQ EIVRMLKEMG EIVAMTGDGV NDAPALKLAD IGIAMGITGT EVAKEASDMV LADDNFSTIV SAVAEGRSIY NNMKAFIRYM ISSNVGEVIS
0801: IFLTAALSIP ECMIPVQLLW VNLVTDGPPA TALGFNPADV DIMRKPPRKS DDALINSWVL FRYLVIGSYV GIATVGIFIL WYTQASFLGI NLVSDGHTLV
0901: ELSQLRNWGE CSSWSNFTVT PFTVGDGRVI TFSNPCDYFS VGKVKAVTLS LSVLVAIEMF NSLNALSEDN SLVTMPPWRN PWLLVAMSFS FGMHCLILYV
1001: PFLADVFGIV PLSLNEWFLV ILVSAPVILI DEVLKLVGRR RRWKRKKKKT A

Best Arabidopsis Sequence Match ( AT4G00900.1 )
(BLAST)

0001: MEEEKSFSAW SWSVEQCLKE YKTRLDKGLT SEDVQIRRQK YGFNELAKEK GKPLWHLVLE QFDDTLVKIL LGAAFISFVL AFLGEEHGSG SGFEAFVEPF
0101: VIVLILILNA VVGVWQESNA EKALEALKEM QCESAKVLRD GNVLPNLPAR ELVPGDIVEL NVGDKVPADM RVSGLKTSTL RVEQSSLTGE AMPVLKGANL
0201: VVMDDCELQG KENMVFAGTT VVNGSCVCIV TSIGMDTEIG KIQRQIHEAS LEESETPLKK KLDEFGSRLT TAICIVCVLV WMINYKNFVS WDVVDGYKPV
0301: NIKFSFEKCT YYFKIAVALA VAAIPEGLPA VITTCLALGT RKMAQKNAIV RKLPSVETLG CTTVICSDKT GTLTTNQMSA TEFFTLGGKT TTTRVFSVSG
0401: TTYDPKDGGI VDWGCNNMDA NLQAVAEICS ICNDAGVFYE GKLFRATGLP TEAALKVLVE KMGIPEKKNS ENIEEVTNFS DNGSSVKLAC CDWWNKRSKK
0501: VATLEFDRVR KSMSVIVSEP NGQNRLLVKG AAESILERSS FAQLADGSLV ALDESSREVI LKKHSEMTSK GLRCLGLAYK DELGEFSDYS SEEHPSHKKL
0601: LDPSSYSNIE TNLIFVGVVG LRDPPREEVG RAIEDCRDAG IRVMVITGDN KSTAEAICCE IRLFSENEDL SQSSFTGKEF MSLPASRRSE ILSKSGGKVF
0701: SRAEPRHKQE IVRMLKEMGE IVAMTGDGVN DAPALKLADI GIAMGITGTE VAKEASDMVL ADDNFSTIVS AVAEGRSIYN NMKAFIRYMI SSNVGEVISI
0801: FLTAALGIPE CMIPVQLLWV NLVTDGPPAT ALGFNPADID IMKKPPRKSD DCLIDSWVLI RYLVIGSYVG VATVGIFVLW YTQASFLGIS LISDGHTLVS
0901: FTQLQNWSEC SSWGTNFTAT PYTVAGGLRT IAFENNPCDY FTLGKVKPMT LSLTVLVAIE MFNSLNALSE DNSLLTMPPW RNPWLLVAMT VSFALHCVIL
1001: YVPFLANVFG IVPLSFREWF VVILVSFPVI LIDEALKFIG RCRRTRIKKK IKTM

Arabidopsis Description

ECA2Calcium-transporting ATPase 2, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:O23087]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.