Factsheet for GSMUA_AchrUn_randomP14920_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 2
peroxisome 1
mitochondrion 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P04000_001	Banana	plasma membrane	63.27	36.94
GSMUA_Achr6P15410_001	Banana	plasma membrane	60.3	36.31
PGSC0003DMT400000352	Potato	peroxisome	69.57	35.78
VIT_15s0046g00040.t01	Wine grape	plasma membrane	69.76	35.78
CDY51719	Canola	plasma membrane	68.65	35.1
Bra037404.1-P	Field mustard	plasma membrane	68.65	35.1
Solyc01g096190.2.1	Tomato	plasma membrane	68.09	35.02
CDY07153	Canola	plasma membrane	68.46	35.01
AT4G00900.1	Thale cress	plasma membrane	67.72	34.63
GSMUA_Achr2P16100_001	Banana	plasma membrane	57.88	34.29
KRH06423	Soybean	plasma membrane	66.05	33.68
KRH47857	Soybean	plasma membrane	66.6	33.46
GSMUA_Achr3P17740_001	Banana	plasma membrane	60.67	32.09
GSMUA_Achr10P...	Banana	plasma membrane	50.28	30.38
GSMUA_AchrUn_...	Banana	mitochondrion, plasma membrane	18.0	30.22
GSMUA_Achr6P23080_001	Banana	plasma membrane	44.9	24.57
GSMUA_Achr9P17740_001	Banana	plasma membrane	26.72	17.76
GSMUA_Achr6P16920_001	Banana	cytosol	24.12	16.88
GSMUA_Achr4P32520_001	Banana	plasma membrane	25.6	16.69
GSMUA_Achr7P25650_001	Banana	plasma membrane	22.63	16.49
GSMUA_Achr4P10650_001	Banana	mitochondrion	23.56	16.04
GSMUA_AchrUn_...	Banana	plasma membrane	25.6	15.61
GSMUA_Achr5P08080_001	Banana	plasma membrane	24.3	15.47
GSMUA_Achr4P10940_001	Banana	cytosol	25.23	15.23
GSMUA_Achr1P23580_001	Banana	plasma membrane	26.9	13.44
GSMUA_AchrUn_...	Banana	plasma membrane	27.27	12.78
GSMUA_Achr4P05790_001	Banana	plasma membrane, plastid	26.35	12.34
GSMUA_Achr3P30070_001	Banana	cytosol, nucleus, plasma membrane	25.79	8.6
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	3.34	4.65
GSMUA_AchrUn_...	Banana	plasma membrane	3.15	3.22

Protein Annotations

Gene3D:1.20.1110.10	MapMan:24.1.2.2.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C
InterPro:ATPase_P-typ_cyto_dom_N	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	EnsemblPlantsGene:GSMUA_AchrUn_randomG14920_001	EnsemblPlants:GSMUA_AchrUn_randomP14920_001
EnsemblPlants:GSMUA_AchrUn_randomT14920_001	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	UniProt:M0U9A1
PFAM:PF00689	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120	PANTHER:PTHR42861	PANTHER:PTHR42861:SF36
InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TMHMM:TMhelix	UniParc:UPI00029629E6
SEG:seg	:	:	:	:	:

Description

Calcium-transporting ATPase, endoplasmic reticulum-type [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG14920_001]

Coordinates

chrchrUn_random:-:70833358..70839127

Molecular Weight (calculated)

59799.3 Da

IEP (calculated)

6.992

GRAVY (calculated)

0.271

Length

539 amino acids

Sequence
(BLAST)

001: MLEDIGKILD IKKTLERAIF VIGFIYNHIG ALNMMREFTR NKELVRYDVT RFATSFLTLQ SVYRQKHNLR NIVFERSSHV QLSDGSVALL DEASKWLITS
101: NVQAMSSKGL RCLGFAFKDD LGDNLIFVGV VGLRDPPRDE VHKAIEDCRC AGIKVMVITG DNKSTAEAIC KEIALFSDKT SVRGKSFTGK EFMTLPADQQ
201: MEILSKPGGV VFSRAEPRHK QDIVRLLKDM GEIVAMTGDG VNDAPALKLA DVGIAMGITG TEVAKQAADM ILADDNFSTI VSAVAEGRAI YSNMKSFIRY
301: MISSNMGEVI SIFLTAALGI PECLIPVQLL WVNLVTDGPP ATALGFNPAD VDIMQKPPCK SNAALINSWV LFRYLVIGAY VGLASVGVFI LWYTQPSFMG
401: LDLASDGHTF ISLAELRSWR ECAAWPDFYP NSFAMTLSLS VLVATEMFNS LNALSEDNSL LHVPPWRNPW LILAMLVSFG LHFIIVYVPF LANIFGIVPL
501: NLNEWLLVVS VSVPVVLIDE VLKYAGRKRW WRIHKQKMA

Best Arabidopsis Sequence Match ( AT1G07670.1 )
(BLAST)

0001: MGKGGEDCGN KQTNSSELVK SDTFPAWGKD VSECEEKFGV SREKGLSTDE VLKRHQIYGL NELEKPEGTS IFKLILEQFN DTLVRILLAA AVISFVLAFF
0101: DGDEGGEMGI TAFVEPLVIF LILIVNAIVG IWQETNAEKA LEALKEIQSQ QATVMRDGTK VSSLPAKELV PGDIVELRVG DKVPADMRVV ALISSTLRVE
0201: QGSLTGESEA VSKTTKHVDE NADIQGKKCM VFAGTTVVNG NCICLVTDTG MNTEIGRVHS QIQEAAQHEE DTPLKKKLNE FGEVLTMIIG LICALVWLIN
0301: VKYFLSWEYV DGWPRNFKFS FEKCTYYFEI AVALAVAAIP EGLPAVITTC LALGTRKMAQ KNALVRKLPS VETLGCTTVI CSDKTGTLTT NQMAVSKLVA
0401: MGSRIGTLRS FNVEGTSFDP RDGKIEDWPT GRMDANLQMI AKIAAICNDA NVEKSDQQFV SRGMPTEAAL KVLVEKMGFP EGLNEASSDG NVLRCCRLWS
0501: ELEQRIATLE FDRDRKSMGV MVDSSSGKKL LLVKGAVENV LERSTHIQLL DGSTRELDQY SRDLILQSLH DMSLSALRCL GFAYSDVPSD FATYDGSEDH
0601: PAHQQLLNPS NYSSIESNLV FVGFVGLRDP PRKEVRQAIA DCRTAGIRVM VITGDNKSTA EAICREIGVF EADEDISSRS LTGKEFMDVK DQKNHLRQTG
0701: GLLFSRAEPK HKQEIVRLLK EDGEVVAMTG DGVNDAPALK LADIGVAMGI SGTEVAKEAS DLVLADDNFS TIVAAVGEGR SIYNNMKAFI RYMISSNIGE
0801: VASIFLTAAL GIPEGMIPVQ LLWVNLVTDG PPATALGFNP PDKDIMKKPP RRSDDSLITA WILFRYMVIG LYVGVATVGV FIIWYTHNSF MGIDLSQDGH
0901: SLVSYSQLAH WGQCSSWEGF KVSPFTAGSQ TFSFDSNPCD YFQQGKIKAS TLSLSVLVAI EMFNSLNALS EDGSLVTMPP WVNPWLLLAM AVSFGLHFVI
1001: LYVPFLAQVF GIVPLSLNEW LLVLAVSLPV ILIDEVLKFV GRCTSGYRYS PRTPSAKQKE E

Arabidopsis Description

ECA4Calcium-transporting ATPase 4, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:Q9XES1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.