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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • endoplasmic reticulum 3
  • peroxisome 1
  • extracellular 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, peroxisome, secretory
BaCelLo:cytosol
EpiLoc:endoplasmic reticulum
MultiLoc:peroxisome
Plant-mPloc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY07153 Canola plasma membrane 93.45 93.45
Bra037404.1-P Field mustard plasma membrane 93.45 93.45
CDY51719 Canola plasma membrane 93.07 93.07
VIT_15s0046g00040.t01 Wine grape plasma membrane 79.89 80.11
KRH06423 Soybean plasma membrane 78.37 78.15
PGSC0003DMT400000352 Potato peroxisome 77.42 77.86
Solyc01g096190.2.1 Tomato plasma membrane 77.13 77.58
KRH47857 Soybean plasma membrane 77.89 76.51
GSMUA_AchrUn_... Banana cytosol, golgi, plasma membrane 26.47 72.09
GSMUA_AchrUn_... Banana peroxisome, plasma membrane, vacuole 34.63 67.72
GSMUA_Achr1P04000_001 Banana plasma membrane 58.16 66.41
AT1G07810.1 Thale cress plasma membrane 65.09 64.66
AT1G07670.2 Thale cress plasma membrane 64.9 64.47
AT1G10130.1 Thale cress plasma membrane 45.92 48.5
AT3G22910.1 Thale cress plasma membrane 26.76 27.73
AT2G22950.1 Thale cress cytosol, peroxisome, plasma membrane 26.28 27.29
AT1G27770.1 Thale cress plasma membrane 26.19 27.06
AT4G37640.1 Thale cress plasma membrane 25.9 26.92
AT3G63380.1 Thale cress plasma membrane 26.38 26.91
AT2G41560.1 Thale cress plasma membrane 26.19 26.8
AT3G57330.1 Thale cress cytosol, peroxisome, plasma membrane, plastid 25.9 26.63
AT5G57110.2 Thale cress plasma membrane 26.57 26.07
AT4G29900.1 Thale cress plasma membrane 26.28 25.91
AT3G21180.1 Thale cress cytosol, plasma membrane, plastid 26.28 25.51
AT5G53010.1 Thale cress plasma membrane 20.59 20.69
Protein Annotations
Gene3D:1.20.1110.10Gene3D:2.60.120.1500Gene3D:2.70.150.10MapMan:24.1.2.2.1Gene3D:3.40.1110.10Gene3D:3.40.50.1000
EntrezGene:827984ProteinID:AAB62850.1ProteinID:AEE81953.1EMBL:AJ132387ProteinID:ANM67918.1ArrayExpress:AT4G00900
EnsemblPlantsGene:AT4G00900RefSeq:AT4G00900TAIR:AT4G00900RefSeq:AT4G00900-TAIR-GEnsemblPlants:AT4G00900.1TAIR:AT4G00900.1
InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cation-transptr_CInterPro:ATPase_P-typ_cation-transptr_NInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sf
Unigene:At.488ProteinID:CAB80899.1ncoils:CoilSymbol:ECA2GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005215GO:GO:0005388GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0006810GO:GO:0006811
GO:GO:0006816GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0046872
GO:GO:0070588GO:GO:0099132InterPro:HAD-like_sfInterPro:HAD_sfInterPro:IPR023214InterPro:IPR023299
RefSeq:NP_001329712.1RefSeq:NP_191999.1UniProt:O23087PFAM:PF00122PFAM:PF00689PFAM:PF00690
PFAM:PF13246PO:PO:0000013PO:PO:0000037PO:PO:0000084PO:PO:0000230PO:PO:0000293
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025281PRINTS:PR00119PRINTS:PR00121ScanProsite:PS00154PANTHER:PTHR42861
PANTHER:PTHR42861:SF36InterPro:P_typ_ATPaseSMART:SM00831SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81660
SUPFAM:SSF81665TIGRFAMs:TIGR01494TMHMM:TMhelixUniParc:UPI0000129B4ESEG:seg:
Description
ECA2Calcium-transporting ATPase 2, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:O23087]
Coordinates
chr4:-:382663..386850
Molecular Weight (calculated)
115836.0 Da
IEP (calculated)
5.132
GRAVY (calculated)
0.087
Length
1054 amino acids
Sequence
(BLAST)
0001: MEEEKSFSAW SWSVEQCLKE YKTRLDKGLT SEDVQIRRQK YGFNELAKEK GKPLWHLVLE QFDDTLVKIL LGAAFISFVL AFLGEEHGSG SGFEAFVEPF
0101: VIVLILILNA VVGVWQESNA EKALEALKEM QCESAKVLRD GNVLPNLPAR ELVPGDIVEL NVGDKVPADM RVSGLKTSTL RVEQSSLTGE AMPVLKGANL
0201: VVMDDCELQG KENMVFAGTT VVNGSCVCIV TSIGMDTEIG KIQRQIHEAS LEESETPLKK KLDEFGSRLT TAICIVCVLV WMINYKNFVS WDVVDGYKPV
0301: NIKFSFEKCT YYFKIAVALA VAAIPEGLPA VITTCLALGT RKMAQKNAIV RKLPSVETLG CTTVICSDKT GTLTTNQMSA TEFFTLGGKT TTTRVFSVSG
0401: TTYDPKDGGI VDWGCNNMDA NLQAVAEICS ICNDAGVFYE GKLFRATGLP TEAALKVLVE KMGIPEKKNS ENIEEVTNFS DNGSSVKLAC CDWWNKRSKK
0501: VATLEFDRVR KSMSVIVSEP NGQNRLLVKG AAESILERSS FAQLADGSLV ALDESSREVI LKKHSEMTSK GLRCLGLAYK DELGEFSDYS SEEHPSHKKL
0601: LDPSSYSNIE TNLIFVGVVG LRDPPREEVG RAIEDCRDAG IRVMVITGDN KSTAEAICCE IRLFSENEDL SQSSFTGKEF MSLPASRRSE ILSKSGGKVF
0701: SRAEPRHKQE IVRMLKEMGE IVAMTGDGVN DAPALKLADI GIAMGITGTE VAKEASDMVL ADDNFSTIVS AVAEGRSIYN NMKAFIRYMI SSNVGEVISI
0801: FLTAALGIPE CMIPVQLLWV NLVTDGPPAT ALGFNPADID IMKKPPRKSD DCLIDSWVLI RYLVIGSYVG VATVGIFVLW YTQASFLGIS LISDGHTLVS
0901: FTQLQNWSEC SSWGTNFTAT PYTVAGGLRT IAFENNPCDY FTLGKVKPMT LSLTVLVAIE MFNSLNALSE DNSLLTMPPW RNPWLLVAMT VSFALHCVIL
1001: YVPFLANVFG IVPLSFREWF VVILVSFPVI LIDEALKFIG RCRRTRIKKK IKTM
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.