Factsheet for PGSC0003DMT400000352

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
endoplasmic reticulum 3
peroxisome 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
EpiLoc:	endoplasmic reticulum
MultiLoc:	peroxisome
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g096190.2.1	Tomato	plasma membrane	95.71	95.71
VIT_15s0046g00040.t01	Wine grape	plasma membrane	85.59	85.35
KRH06423	Soybean	plasma membrane	81.58	80.89
KRH47857	Soybean	plasma membrane	81.3	79.4
AT4G00900.1	Thale cress	plasma membrane	77.86	77.42
Bra037404.1-P	Field mustard	plasma membrane	76.81	76.38
CDY07153	Canola	plasma membrane	76.72	76.28
CDY51719	Canola	plasma membrane	76.72	76.28
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	27.39	74.16
GSMUA_AchrUn_...	Banana	peroxisome, plasma membrane, vacuole	35.78	69.57
GSMUA_Achr1P04000_001	Banana	plasma membrane	60.4	68.58
PGSC0003DMT400040184	Potato	plasma membrane	67.08	66.26
PGSC0003DMT400062826	Potato	plasma membrane	10.69	32.09
PGSC0003DMT400096083	Potato	plasma membrane	9.35	31.51
PGSC0003DMT400097702	Potato	plasma membrane	9.92	29.13
PGSC0003DMT400021028	Potato	plasma membrane	25.76	28.72
PGSC0003DMT400050008	Potato	plasma membrane	27.19	28.33
PGSC0003DMT400055386	Potato	plasma membrane	27.29	28.15
PGSC0003DMT400055192	Potato	plasma membrane	26.81	27.63
PGSC0003DMT400033890	Potato	cytosol, peroxisome, plasma membrane	26.53	27.34
PGSC0003DMT400096782	Potato	plasma membrane	16.51	26.7
PGSC0003DMT400033064	Potato	plasma membrane	26.24	26.29
PGSC0003DMT400094259	Potato	plasma membrane	19.66	22.86
PGSC0003DMT400089589	Potato	plasma membrane	16.7	22.24
PGSC0003DMT400089336	Potato	plasma membrane	18.89	21.88
PGSC0003DMT400093936	Potato	plasma membrane	25.0	21.25
PGSC0003DMT400048740	Potato	plastid	20.13	20.53

Protein Annotations

Gene3D:1.20.1110.10	EntrezGene:102591952	Gene3D:2.60.120.1500	Gene3D:2.70.150.10	MapMan:24.1.2.2.1	Gene3D:3.40.1110.10
Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sf	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	UniProt:M0ZGL0	PFAM:PF00122	PFAM:PF00689
PFAM:PF00690	PFAM:PF00702	PFAM:PF13246	EnsemblPlantsGene:PGSC0003DMG400000123	PGSC:PGSC0003DMG400000123	EnsemblPlants:PGSC0003DMT400000352
PRINTS:PR00119	PRINTS:PR00121	ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF36	InterPro:P_typ_ATPase
SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494
TMHMM:TMhelix	UniParc:UPI000296B032	RefSeq:XP_006339743.1	RefSeq:XP_006339744.1	RefSeq:XP_006339745.1	RefSeq:XP_015167921.1
RefSeq:XP_015167927.1	RefSeq:XP_015167930.1	RefSeq:XP_015167932.1	SEG:seg	:	:

Description

Calcium-transporting ATPase, endoplasmic reticulum-type [Source:PGSC_GENE;Acc:PGSC0003DMG400000123]

Coordinates

chr1:+:73762824..73767731

Molecular Weight (calculated)

115593.0 Da

IEP (calculated)

5.351

GRAVY (calculated)

0.117

Length

1048 amino acids

Sequence
(BLAST)

0001: MEEKPFPAWS WSVDQCLKEY QVKLEKGLST YEVEKRRERY GLNELEKEKG KPLWRLVLEQ FDDMLVKILL GAAFISFVLA YLHQDETGES GFEAYVEPIV
0101: ILLILVLNAI VGVWQESNAE KALEALKEMQ GESAKVLRDG YLVPDLPAKE LVPGDIVELR VGDKVPADMR VATLKSSTLR VEQSSLTGES MPVTKSTDFL
0201: AMDDCELQAK ENMVFAGTTV VNGSCICIVV NTGMCTEIGN IQRQIHDASM EESDTPLKKK LDEFGNRLTS AIGVVCLVVW AINYKYFLSW EVVDGWPSNV
0301: RFSFEKCTYY FKIAVALAVA AIPEGLPAVI TTCLALGTRK MAQKNAIVRK LPSVETLGCT TVICSDKTGT LTTNQMSVSE FFTLGGETTA CRVFGVEGTT
0401: YDPKDGGIMG WNCSKMDSNL LLMAEICAIC NDAGVFCDGR LFKATGLPTE AALKVLVEKM GVPDSKARSK IRDAQIVSSY LIDRNTVKLG CCDWWMKRSK
0501: RVATLEFDRV RKSMGVIVRE LNGSNRLLVK GAVESLLERS TYVQLADGST VPIDESCRQL LLLRHLEMSS KGLRCLGLAY KDDLGELSGY YAATHPAHKK
0601: LLDPSCYSSI ESDLVFVGVV GLRDPPREEV HKAINDCRRA GIKIMVITGD NKSTAEAVCR EIQLFSNGEN LGRSSFTGKE FMAFSSQQQI EILSQDGGKV
0701: FSRAEPRHKQ EIVRILKEMG EIVAMTGDGV NDAPALKLAD IGIAMGITGT EVAKEASDMV LADDNFSTIV SAVAEGRSIY NNMKAFIRYM ISSNVGEVIS
0801: IFLTAALGIP ECLIPVQLLW VNLVTDGPPA TALGFNPADV DIMQKPPRKS NEALINSWVF FRYMVIGSYV GIATVGIFIV WYTQASFLGI DLVSDGHTLV
0901: ELSQLRNWGE CSAWPNFTVS PFKAGNRLIT FSDPCEYFTV GKVKAMTLSL SVLVAIEMFN SLNALSEDNS LIKMPPWRNP WLLVAMSVSF ALHSLILYVP
1001: FLADIFGIVP LSLNEWLLVI LLSAPVILID EVLKFVGRRR SRTKLKTA

Best Arabidopsis Sequence Match ( AT4G00900.1 )
(BLAST)

0001: MEEEKSFSAW SWSVEQCLKE YKTRLDKGLT SEDVQIRRQK YGFNELAKEK GKPLWHLVLE QFDDTLVKIL LGAAFISFVL AFLGEEHGSG SGFEAFVEPF
0101: VIVLILILNA VVGVWQESNA EKALEALKEM QCESAKVLRD GNVLPNLPAR ELVPGDIVEL NVGDKVPADM RVSGLKTSTL RVEQSSLTGE AMPVLKGANL
0201: VVMDDCELQG KENMVFAGTT VVNGSCVCIV TSIGMDTEIG KIQRQIHEAS LEESETPLKK KLDEFGSRLT TAICIVCVLV WMINYKNFVS WDVVDGYKPV
0301: NIKFSFEKCT YYFKIAVALA VAAIPEGLPA VITTCLALGT RKMAQKNAIV RKLPSVETLG CTTVICSDKT GTLTTNQMSA TEFFTLGGKT TTTRVFSVSG
0401: TTYDPKDGGI VDWGCNNMDA NLQAVAEICS ICNDAGVFYE GKLFRATGLP TEAALKVLVE KMGIPEKKNS ENIEEVTNFS DNGSSVKLAC CDWWNKRSKK
0501: VATLEFDRVR KSMSVIVSEP NGQNRLLVKG AAESILERSS FAQLADGSLV ALDESSREVI LKKHSEMTSK GLRCLGLAYK DELGEFSDYS SEEHPSHKKL
0601: LDPSSYSNIE TNLIFVGVVG LRDPPREEVG RAIEDCRDAG IRVMVITGDN KSTAEAICCE IRLFSENEDL SQSSFTGKEF MSLPASRRSE ILSKSGGKVF
0701: SRAEPRHKQE IVRMLKEMGE IVAMTGDGVN DAPALKLADI GIAMGITGTE VAKEASDMVL ADDNFSTIVS AVAEGRSIYN NMKAFIRYMI SSNVGEVISI
0801: FLTAALGIPE CMIPVQLLWV NLVTDGPPAT ALGFNPADID IMKKPPRKSD DCLIDSWVLI RYLVIGSYVG VATVGIFVLW YTQASFLGIS LISDGHTLVS
0901: FTQLQNWSEC SSWGTNFTAT PYTVAGGLRT IAFENNPCDY FTLGKVKPMT LSLTVLVAIE MFNSLNALSE DNSLLTMPPW RNPWLLVAMT VSFALHCVIL
1001: YVPFLANVFG IVPLSFREWF VVILVSFPVI LIDEALKFIG RCRRTRIKKK IKTM

Arabidopsis Description

ECA2Calcium-transporting ATPase 2, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:O23087]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.