Factsheet for PGSC0003DMT400050008

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
endoplasmic reticulum 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g097400.1.1	Tomato	cytosol	24.85	90.91
PGSC0003DMT400096083	Potato	plasma membrane	24.06	77.81
PGSC0003DMT400062826	Potato	plasma membrane	26.84	77.36
PGSC0003DMT400097702	Potato	plasma membrane	24.65	69.47
KRH41701	Soybean	mitochondrion	62.92	64.2
KRH29171	Soybean	plasma membrane	60.64	64.14
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	64.02	63.95
VIT_14s0030g02080.t01	Wine grape	plasma membrane	67.0	63.35
PGSC0003DMT400096782	Potato	plasma membrane	37.48	58.18
PGSC0003DMT400089589	Potato	plasma membrane	44.33	56.67
GSMUA_Achr7P25650_001	Banana	plasma membrane	41.15	55.95
GSMUA_Achr4P10650_001	Banana	mitochondrion	43.24	54.92
TraesCS1D01G335400.1	Wheat	plastid	54.77	54.02
TraesCS1B01G346400.1	Wheat	plastid	54.77	54.02
TraesCS1D01G335500.1	Wheat	plastid	54.57	53.98
EER91614	Sorghum	plasma membrane	54.08	53.75
TraesCSU01G003600.1	Wheat	plastid	54.27	53.74
TraesCS1A01G332800.1	Wheat	plastid	54.57	53.61
HORVU1Hr1G076950.3	Barley	plastid	54.67	53.5
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	53.88	53.45
Os10t0418100-01	Rice	golgi	54.57	53.04
TraesCS1D01G066500.1	Wheat	mitochondrion	44.14	52.61
PGSC0003DMT400089336	Potato	plasma membrane	47.22	52.49
HORVU0Hr1G016220.1	Barley	peroxisome, plasma membrane	43.64	50.69
PGSC0003DMT400093936	Potato	plasma membrane	59.24	48.34
Zm00001d043925_P001	Maize	plasma membrane	29.22	46.82
PGSC0003DMT400021028	Potato	plasma membrane	42.25	45.21
TraesCS4B01G007200.1	Wheat	cytosol, peroxisome, plasma membrane	41.85	43.45
PGSC0003DMT400094259	Potato	plasma membrane	38.57	43.06
PGSC0003DMT400055386	Potato	plasma membrane	43.44	43.01
PGSC0003DMT400055192	Potato	plasma membrane	43.14	42.67
PGSC0003DMT400033890	Potato	cytosol, peroxisome, plasma membrane	43.04	42.58
PGSC0003DMT400033064	Potato	plasma membrane	44.04	42.35
PGSC0003DMT400048740	Potato	plastid	41.85	40.95
TraesCS1A01G161100.1	Wheat	mitochondrion	28.63	38.87
PGSC0003DMT400000352	Potato	peroxisome	28.33	27.19
PGSC0003DMT400040184	Potato	plasma membrane	28.03	26.58

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006816	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0070588	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	InterPro:IPR023299	UniProt:M1BPN9	InterPro:P-type_ATPase_IIB	PFAM:PF00122	PFAM:PF00689
PFAM:PF00690	PFAM:PF00702	EnsemblPlantsGene:PGSC0003DMG400019431	PGSC:PGSC0003DMG400019431	EnsemblPlants:PGSC0003DMT400050008	PRINTS:PR00119
PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR24093	PANTHER:PTHR24093:SF292	InterPro:P_typ_ATPase	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517	TMHMM:TMhelix
UniParc:UPI000295686F	SEG:seg	:	:	:	:

Description

Cation-transporting atpase plant [Source:PGSC_GENE;Acc:PGSC0003DMG400019431]

Coordinates

chr1:-:75124505..75128528

Molecular Weight (calculated)

111383.0 Da

IEP (calculated)

7.355

GRAVY (calculated)

0.116

Length

1006 amino acids

Sequence
(BLAST)

0001: MAIHTSEHSD TIMFLSNERD SYLGKPHKRL QLVFRAIYFV AFLNKKRIDR NTLVLSQLVR DPSYIIDIES INDHEKQLFH GINKEALAKL VREKDFNGLL
0101: QFGGVLQVVV ILGSDQKEGI RMHENGVEQR KVTFGSNIYD KPQAKSFLSF VVEGFNDTTI IILLVCAVLS LGFGIKQHGP KEGWYDGGSI IIAVILVLAV
0201: SSISNFKQSR QFLNLLEESK DIKVEVMREG RRQEVSIFDI VVGDVVCLKI GDQIPADGLF LDGHSLQVDE SSMTGESDHV QINKTQNPFL VCGTKVMDGY
0301: GHMLVTSVGA NNAWGQMMCT ITDDKNEQTP LQIRLNKLTK YIGNVGLLVA FLVLVTLMIR YFTGHTENES GQKEFVGSKT KADDIMNSLI RIIAAAVTII
0401: VVAIPEGLPL AVTLTLAYSM RRMMLDHAMV RKLSACETMG SATTICTDKT GTLTLNQMQV TEFFLGTEMI MTTSQLAPDV VQLLQEAACL NTTGDVYTTP
0501: SGPPEICGGP TEKAILSWAL TSLLVNFNEL KQKYQILHVE VFNSQKKRSG VLVTKNSTGK VHTHWKGAAE MILAMCSTYY VKSGKIAPID HEERKELDLK
0601: IEYMASKSLR CIAFAYKESN AENQALEETE LTLLGLVGLK DPCRPGVKGA VESCRAAGVS IKMITGDNVF TAKSIAFECG ILQPGEDLNI AVIEGPAFRN
0701: YSQEERMEIV EKIRVMARSS PFDKLLMVEC LKQKGHVVAV TGDGTNDAPA LKAADIGLSM GIQGTEVAKE SSDIVILDDN FTTVVTVLKW GRCVYNNIQK
0801: FIQFQLTVNV AALVINFVAA ASSGEVPLTA VQLLWVNLIM DTLGALALAT ERPSCDLMNK KPVGRTKPLI TGVMWRNLLA QALYQVTVLL ILQFKGSAIF
0901: HVNKKVKDTL IFNTFVLCQV FNEFNARNLE KKNIFRGILK NRLFVGIVGV TIVLQVIMVE FLKKFADTER LNWTQWAACI GISSLSWPIG WIIKCIPVSK
1001: NDDFDH

Best Arabidopsis Sequence Match ( AT3G63380.1 )
(BLAST)

0001: MRDLKEYDYS ALLLNLTTSS LNKAQRRWRF AYAAIYSMRA MLSLVKEIVP ARIDPKTSDA SLSLSYTALE SGEGAKINSM PLSYVPAIDQ EQLVEIMKGK
0101: DLPGIQALGG VEGVAASLRT NPTKGIHGNE QEVSRRRDLF GSNTYHKPPP KGLLFFVYEA FKDLTILILL VCAIFSLGFG IKEHGIKEGW YEGGSIFVAV
0201: FLVIVVSALS NFRQERQFDK LSKISNNIKV EVLRDSRRQH ISIFDVVVGD VVFLKIGDQI PADGLFLEGH SLQVDESSMT GESDHLEVDH KDNPFLFSGT
0301: KIVDGFAQML VVSVGMSTTW GQTMSSINQD SSERTPLQVR LDTLTSTIGK IGLTVAALVL VVLLVRYFTG NTEKEGKREY NGSKTPVDTV VNSVVRIVAA
0401: AVTIVVVAIP EGLPLAVTLT LAYSMKRMMS DQAMVRKLSA CETMGSATVI CTDKTGTLTL NEMKVTKFWL GQESIHEDST KMISPDVLDL LYQGTGLNTT
0501: GSVCVSDSGS TPEFSGSPTE KALLSWTVLN LGMDMESVKQ KHEVLRVETF SSAKKRSGVL VRRKSDNTVH VHWKGAAEMV LAMCSHYYTS TGSVDLMDST
0601: AKSRIQAIIQ GMAASSLRCI AFAHKIASND SVLEEDGLTL MGIVGLKDPC RPGVSKAVET CKLAGVTIKM ITGDNVFTAK AIAFECGILD HNDKDEEDAV
0701: VEGVQFRNYT DEERMQKVDK IRVMARSSPS DKLLMVKCLR LKGHVVAVTG DGTNDAPALK EADIGLSMGI QGTEVAKESS DIVILDDNFA SVATVLKWGR
0801: CVYNNIQKFI QFQLTVNVAA LVINFIAAIS AGEVPLTAVQ LLWVNLIMDT LGALALATER PTNELLKRKP VGRTEALITN VMWRNLLVQS LYQIAVLLIL
0901: QFKGMSIFSV RKEVKDTLIF NTFVLCQVFN EFNAREMEKK NVFKGLHRNR LFIGIIAITI VLQVIMVEFL KKFADTVRLN GWQWGTCIAL ASLSWPIGFF
1001: TKFIPVSETP FLSYFKNPRS LFKGSRSPSL KKP

Arabidopsis Description

ACA12Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178VEV7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.