Factsheet for TraesCS1D01G335500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G245000.1	plasma membrane
TraesCS3A01G490100.1	plasma membrane
TraesCS3B01G275000.1	plasma membrane
TraesCS3B01G550900.1	plasma membrane
TraesCS3B01G551200.1	plasma membrane
TraesCS3D01G246500.1	plasma membrane
TraesCS3D01G496100.1	plasma membrane
TraesCS7A01G533800.1	plasma membrane
TraesCS7D01G521200.1	plasma membrane
TraesCSU01G171600.1	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G63380.1	TraesCS7A01G533800.1	AT1G75820.1	22535420
AT3G63380.1	TraesCS7D01G521200.1	AT1G75820.1	22535420
AT3G63380.1	TraesCSU01G171600.1	AT1G75820.1	22535420
AT3G63380.1	TraesCS3A01G245000.1	AT4G39400.1	22535420
AT3G63380.1	TraesCS3A01G490100.1	AT4G39400.1	22535420
AT3G63380.1	TraesCS3B01G275000.1	AT4G39400.1	22535420
AT3G63380.1	TraesCS3B01G550900.1	AT4G39400.1	22535420
AT3G63380.1	TraesCS3B01G551200.1	AT4G39400.1	22535420
AT3G63380.1	TraesCS3D01G246500.1	AT4G39400.1	22535420
AT3G63380.1	TraesCS3D01G496100.1	AT4G39400.1	22535420

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G335400.1	Wheat	plastid	97.64	97.35
TraesCSU01G003600.1	Wheat	plastid	96.95	97.05
TraesCS1B01G346400.1	Wheat	plastid	97.25	96.96
TraesCS1A01G332800.1	Wheat	plastid	97.44	96.78
HORVU1Hr1G076950.3	Barley	plastid	95.58	94.55
TraesCS1D01G066500.1	Wheat	mitochondrion	73.55	88.63
EER91614	Sorghum	plasma membrane	80.73	81.13
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	79.55	79.78
Os10t0418100-01	Rice	golgi	80.83	79.42
PGSC0003DMT400062826	Potato	plasma membrane	23.21	67.62
PGSC0003DMT400096083	Potato	plasma membrane	20.65	67.52
Zm00001d043925_P001	Maize	plasma membrane	40.9	66.24
GSMUA_Achr4P10650_001	Banana	mitochondrion	49.46	63.51
GSMUA_Achr7P25650_001	Banana	plasma membrane	46.02	63.24
Solyc01g097400.1.1	Tomato	cytosol	16.91	62.55
KRH67272	Soybean	peroxisome, plasma membrane	55.65	61.79
PGSC0003DMT400097702	Potato	plasma membrane	21.63	61.62
VIT_05s0020g04390.t01	Wine grape	plastid	57.72	58.0
VIT_05s0020g04380.t01	Wine grape	plasma membrane	57.42	57.71
KRH41701	Soybean	mitochondrion	55.65	57.4
KRH29171	Soybean	plasma membrane	53.39	57.1
CDY40822	Canola	plasma membrane	56.93	56.99
AT3G22910.1	Thale cress	plasma membrane	56.93	56.93
CDY10680	Canola	plasma membrane	56.74	56.9
Bra023790.1-P	Field mustard	plasma membrane	56.83	56.83
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	58.6	56.76
Bra033900.1-P	Field mustard	plasma membrane	56.64	56.75
CDY34219	Canola	plasma membrane	56.74	56.74
KRG93759	Soybean	plastid	57.23	56.56
VIT_05s0020g04240.t01	Wine grape	plasma membrane	52.9	56.16
CDY10319	Canola	plasma membrane	56.54	56.1
VIT_14s0030g02110.t01	Wine grape	plasma membrane	54.38	55.92
VIT_05s0020g04300.t01	Wine grape	plasma membrane	57.52	55.82
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	55.06	55.61
VIT_19s0014g01620.t01	Wine grape	plasma membrane	31.07	54.77
VIT_05s0020g04350.t01	Wine grape	plasma membrane	17.11	54.72
PGSC0003DMT400050008	Potato	plasma membrane	53.98	54.57
VIT_05s0020g04280.t01	Wine grape	plastid	57.33	54.54
KRG95593	Soybean	plasma membrane	57.33	54.54
VIT_14s0030g02080.t01	Wine grape	plasma membrane	56.83	54.32
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	56.93	54.32
AT3G63380.1	Thale cress	plasma membrane	54.97	54.11
CDX93910	Canola	plasma membrane	54.97	54.11
PGSC0003DMT400096782	Potato	plasma membrane	34.32	53.86
PGSC0003DMT400089589	Potato	plasma membrane	40.61	52.48
PGSC0003DMT400089336	Potato	plasma membrane	42.97	48.29
Solyc09g082890.1.1	Tomato	peroxisome, plasma membrane	18.19	48.18
VIT_05s0020g04360.t01	Wine grape	plasma membrane	34.32	48.14
TraesCS6D01G142400.1	Wheat	cytosol, nucleus, plasma membrane	49.46	46.02
TraesCS2D01G430700.1	Wheat	plasma membrane	48.77	45.97
TraesCS5D01G284100.3	Wheat	plasma membrane	48.48	45.86
TraesCS7D01G252900.4	Wheat	cytosol	48.77	45.8
PGSC0003DMT400093936	Potato	plasma membrane	53.98	44.53
TraesCS5D01G080700.1	Wheat	plasma membrane	42.28	42.16
TraesCS4D01G257900.1	Wheat	plasma membrane	41.99	41.86
TraesCS5D01G142900.2	Wheat	plasma membrane	42.38	41.6
TraesCS3D01G470100.1	Wheat	plasma membrane	42.38	41.32
TraesCS4D01G079200.1	Wheat	plasma membrane	41.79	40.48
TraesCS1D01G312500.1	Wheat	plasma membrane	40.61	39.64
PGSC0003DMT400094259	Potato	plasma membrane	34.12	38.51
PGSC0003DMT400048740	Potato	plastid	37.27	36.87
Solyc09g082870.1.1	Tomato	plasma membrane	36.97	34.88
VIT_05s0020g04270.t01	Wine grape	plasma membrane	54.57	31.06
VIT_05s0020g04220.t01	Wine grape	plastid	57.62	28.5
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	57.13	28.33
TraesCS4D01G202200.2	Wheat	plasma membrane	28.32	27.12
TraesCS1D01G047900.1	Wheat	plasma membrane	27.63	26.66
TraesCS4D01G060900.1	Wheat	plasma membrane	25.96	26.4
TraesCS4D01G079100.1	Wheat	nucleus	0.2	0.31

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0070588	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	InterPro:P-type_ATPase_IIB
PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120
ScanProsite:PS00154	PANTHER:PTHR24093	PANTHER:PTHR24093:SF292	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS1D01G335500	EnsemblPlants:TraesCS1D01G335500.1	TIGR:cd02081	SEG:seg	:	:

Description

No Description!

Coordinates

chr1D:+:425672252..425675305

Molecular Weight (calculated)

109712.0 Da

IEP (calculated)

8.338

GRAVY (calculated)

0.141

Length

1017 amino acids

Sequence
(BLAST)

0001: MECADVLIAV SRRSTSPSTS SSWQPGRQWR KALTVIRTCH RLARLGILSA GVLPRRSNSS YVAIKIHHDG SDSDADAAAF SVAADDELFK GLVKEKRQDC
0101: FRRLGGGAGI AAALASHAER GIRGDGDDVR RRRESFGGNT YPKPRPKSFF SHVWDALKDV FLIVLLVCAV VSLGFGIKEH GLKDGWYDGV SIFLAVFLVA
0201: AVSAVSNHSQ AKRFDKLASE SDNIAVTVVR AGRRQEVSIF DILVGDVVIL KIGDSVPADG VFLEGHGLQV DESSMTGEPH PIEIDAEKNP FLTGGVKIVD
0301: GYGRMLVTAV GTDTLWGEMM SSITKETAEP TPLQERLERL TSSIGKIGVA VAVLVFTVLT ARHFTGSTKD DQGKPLFNKG HVTFDAVFSS LVVIFQQAVT
0401: IIVVAIPEGL PLAVTLTLAF SMKRMVKENA LVRRLSACET MGSVTAICTD KTGTLTLNQM KVTEFWVGTD QPRGATAIAG SVVSLLCQGA GLNTTGSVYK
0501: PDNVSPPEIT GSPTEKALLS WAVADLGMDA DALKRSCKVL HVEAFNSDKK RSGVMIRDNV TGGVIAHWKG AAEMVLANCS MYVDTDGAAR ELGVEQRRNL
0601: EKVINDMAVG SLRCIAFAYK QVNSTTEQSK IDDDGLTLLG FVGLKDPCRP EVKAAIEACT KAGVAVKMVT GDNILTASAI AKECGIISSN DPSGIVIEGH
0701: EFRAMSPEQQ LEIVDRIRVM ARSLPLDKLA LVQRLKQKGH VVAVTGDGTN DAPALKEADV GLSMGVQGTE VAKESSDIII LNDNFDTVVT ATRWGRCVYN
0801: NIQKFIQFQL TVNVAALVIN FVSAITTGKM PLTTVQLLWV NLIMDTMGAL ALATDTPTKA LMDRPPIGRT APLISNAMWR NLAAQAAFQI AVLLALQYRG
0901: RYVFGTDEKG NGTMIFNAFV LCQVFNEFNA REIEKKNVFA GVLKNMMFLV IIAVTLVLQV VMVEVLTRFA GTKRLGLGQW GVCLAIAAVS WPIGWAVKFI
1001: PVPDRTLHDI LTRRKSS

Best Arabidopsis Sequence Match ( AT3G22910.1 )
(BLAST)

0001: MRRNVSDHAE KKDKVGVEVL LELPKTLSKS NKKWQLALIK LYCSRTLLNC AKHAIRKPGL FPRSLSYTAI DLDHHHGDDH FKIDTETLND LVKNKNQEKL
0101: ESLGGPNGLV SALKSNTRLG INEEGDEIQR RRSTFGSNTY TRQPSKGLFH FVVEAFKDLT ILILLGCATL SLGFGIKEHG LKEGWYDGGS IFVAVFLVVA
0201: VSAVSNFRQN RQFDKLSKVS SNIKIDVVRN GRRQEISIFD IVVGDIVCLN IGDQVPADGV FVEGHLLHVD ESSMTGESDH VEVSLTGNTF LFSGTKIADG
0301: FGKMAVTSVG MNTAWGQMMS HISRDTNEQT PLQSRLDKLT SSIGKVGLLV AFLVLLVLLI RYFTGTTKDE SGNREYNGKT TKSDEIVNAV VKMVAAAVTI
0401: IVVAIPEGLP LAVTLTLAYS MKRMMKDNAM VRKLSACETM GSATVICTDK TGTLTLNQMK VTDFWFGLES GKASSVSQRV VELFHQGVAM NTTGSVFKAK
0501: AGTEYEFSGS PTEKAILSWA VEELEMGMEK VIEEHDVVHV EGFNSEKKRS GVLMKKKGVN TENNVVHWKG AAEKILAMCS TFCDGSGVVR EMKEDDKIQF
0601: EKIIQSMAAK SLRCIAFAYS EDNEDNKKLK EEKLSLLGII GIKDPCRPGV KKAVEDCQFA GVNIKMITGD NIFTARAIAV ECGILTPEDE MNSEAVLEGE
0701: KFRNYTQEER LEKVERIKVM ARSSPFDKLL MVKCLKELGH VVAVTGDGTN DAPALKEADI GLSMGIQGTE VAKESSDIVI LDDNFASVAT VLKWGRCVYN
0801: NIQKFIQFQL TVNVAALVIN FVAAVSAGDV PLTAVQLLWV NLIMDTLGAL ALATEKPTND LMKKKPIGRV APLITNIMWR NLLAQAFYQI SVLLVLQFRG
0901: RSIFNVTEKV KNTLIFNTFV LCQVFNEFNA RSLEKKNVFK GLHKNRLFIG IIVVTVVLQV VMVEFLKRFA DTERLNLGQW GVCIAIAAAS WPIGWLVKSV
1001: PVPERHFFSY LKWKKRS

Arabidopsis Description

ACA13Putative calcium-transporting ATPase 13, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.