Factsheet for VIT_05s0020g04360.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
endoplasmic reticulum 2
plastid 2
plasma membrane 4
mitochondrion 1
extracellular 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	endoplasmic reticulum
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400096782	Potato	plasma membrane	56.97	63.73
Solyc09g082890.1.1	Tomato	peroxisome, plasma membrane	33.1	62.5
VIT_05s0020g04380.t01	Wine grape	plasma membrane	85.24	61.07
VIT_05s0020g04390.t01	Wine grape	plastid	84.97	60.87
VIT_05s0020g04300.t01	Wine grape	plasma membrane	77.52	53.63
VIT_05s0020g04280.t01	Wine grape	plastid	77.38	52.48
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	75.59	51.41
VIT_05s0020g04240.t01	Wine grape	plasma membrane	66.34	50.21
PGSC0003DMT400089336	Potato	plasma membrane	59.45	47.62
KRG93759	Soybean	plastid	64.97	45.77
Zm00001d043925_P001	Maize	plasma membrane	38.34	44.27
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	63.86	44.1
Bra023790.1-P	Field mustard	plasma membrane	61.52	43.85
CDY34219	Canola	plasma membrane	61.52	43.85
CDY40822	Canola	plasma membrane	61.38	43.8
CDY10680	Canola	plasma membrane	60.14	43.0
AT3G22910.1	Thale cress	plasma membrane	60.28	42.97
Bra033900.1-P	Field mustard	plasma membrane	60.0	42.86
CDY10319	Canola	plasma membrane	59.86	42.34
VIT_14s0030g02110.t01	Wine grape	plasma membrane	56.41	41.35
PGSC0003DMT400089589	Potato	plasma membrane	44.0	40.53
VIT_14s0030g02080.t01	Wine grape	plasma membrane	59.17	40.32
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	55.31	39.82
VIT_19s0014g01620.t01	Wine grape	plasma membrane	31.59	39.69
TraesCS1D01G066500.1	Wheat	mitochondrion	44.14	37.91
GSMUA_Achr7P25650_001	Banana	plasma membrane	37.79	37.03
GSMUA_Achr4P10650_001	Banana	mitochondrion	39.31	35.98
TraesCS1B01G346400.1	Wheat	plastid	48.55	34.51
TraesCS1D01G335400.1	Wheat	plastid	48.41	34.41
EER91614	Sorghum	plasma membrane	48.0	34.39
TraesCS1D01G335500.1	Wheat	plastid	48.14	34.32
TraesCSU01G003600.1	Wheat	plastid	48.0	34.25
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	47.72	34.12
TraesCS1A01G332800.1	Wheat	plastid	48.14	34.08
HORVU1Hr1G076950.3	Barley	plastid	48.28	34.05
Os10t0418100-01	Rice	golgi	48.28	33.82
PGSC0003DMT400093936	Potato	plasma membrane	57.24	33.66
HORVU0Hr1G016220.1	Barley	peroxisome, plasma membrane	36.69	30.72
VIT_11s0052g00320.t01	Wine grape	plasma membrane	45.24	30.37
TraesCS4B01G007200.1	Wheat	cytosol, peroxisome, plasma membrane	38.62	28.9
VIT_09s0018g02130.t01	Wine grape	plasma membrane	44.97	28.72
VIT_05s0020g04270.t01	Wine grape	plasma membrane	70.48	28.6
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	76.83	27.16
VIT_05s0020g04220.t01	Wine grape	plastid	76.97	27.14
VIT_08s0007g08960.t01	Wine grape	plasma membrane	36.69	25.75
VIT_18s0001g09150.t01	Wine grape	plasma membrane	36.14	25.74
VIT_13s0158g00360.t01	Wine grape	plasma membrane	36.55	25.58
VIT_07s0129g00180.t01	Wine grape	plasma membrane	35.59	25.32
TraesCS1A01G161100.1	Wheat	mitochondrion	23.59	23.08
VIT_00s0691g00010.t01	Wine grape	plasma membrane	23.86	22.21
VIT_00s0463g00030.t01	Wine grape	plasma membrane	30.9	22.05
VIT_07s0129g00110.t01	Wine grape	plasma membrane	13.38	18.13
VIT_08s0040g02830.t01	Wine grape	plasma membrane	24.14	16.46
VIT_06s0004g03900.t01	Wine grape	plasma membrane	24.0	16.4
VIT_15s0046g00040.t01	Wine grape	plasma membrane	23.03	15.89
VIT_18s0001g08850.t01	Wine grape	plasma membrane	19.03	14.89
PGSC0003DMT400062826	Potato	plasma membrane	3.03	6.3
PGSC0003DMT400097702	Potato	plasma membrane	2.07	4.2
PGSC0003DMT400096083	Potato	plasma membrane	0.14	0.32
VIT_05s0020g04350.t01	Wine grape	plasma membrane	0.14	0.31

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ProteinID:CCB50475	ProteinID:CCB50475.1	UniProt:F6HDV4
EMBL:FN595749	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005886
GO:GO:0005887	GO:GO:0006810	GO:GO:0006811	GO:GO:0006816	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0043231	GO:GO:0070588	GO:GO:0099132	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	InterPro:P-type_ATPase_IIB	PFAM:PF00122	PFAM:PF00690
PFAM:PF13246	PRINTS:PR00119	PANTHER:PTHR24093	PANTHER:PTHR24093:SF414	InterPro:P_typ_ATPase	SMART:SM00831
SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517
TMHMM:TMhelix	UniParc:UPI0002107F2F	ArrayExpress:VIT_05s0020g04360	EnsemblPlantsGene:VIT_05s0020g04360	EnsemblPlants:VIT_05s0020g04360.t01	SEG:seg

Description

Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HDV4]

Coordinates

chr5:-:6107263..6120453

Molecular Weight (calculated)

79367.9 Da

IEP (calculated)

6.855

GRAVY (calculated)

0.012

Length

725 amino acids

Sequence
(BLAST)

001: MEAMFAFVSD SLSLFSSHHR YIAFCLSRSM SDNLHVNLNC KEPKLDVPTT HSKPNKRWRL AFATIYCARV LHSLLNEKKN GSKLPVAAPS FDVFNVKPDA
101: FSRIDQTTLT EIVKEKNVDL LLEFGGVESV ADALETDIKN GISGAVDDVA LRQEAFGSNT YKRPPAKSLF HFVVEAFKDL TVFILLFCAT LSLGFGIKEH
201: GLKEGWYDGG SIFVAVILVV SVSAVSNFRQ NRQFEKLSKV SNNIKVDVFR NGRRQQISIF EIVVGDVVGL KIGDQVPADG LFLDGHSLQV DESSMTGESD
301: HVEVNSSHNP FLFSGTKVAD GYAQMLVTSV GMNTTWGQMM STISRDTNEQ TPLQARLNKL TSSIGKVGMA VAFLVLVVSL VRYFTGNTED ENGNREFIGS
401: NIKAVDMVHS MVTIIAAAFT ILAVAIPKGL LLAVTLILTY SMKRMMADQA MVRKLSACET MGSATTICTG KTGTLTLNQM KVTKIWLGQE PIEVSSSIST
501: NLLNLIQQGV ALNTTGSVYK ASSGSSKFEF SGSPTEKAIL SWAVLELDMD MEILKQNCTI LHVEAFNSEK KRSGVSIRSK ADNTIHVHWK GAAEMILAMC
601: SRYYDASGSM KDMDDDERMI FEQIIQGMAA SSLRCIAFAH TQIPGEEHEI GVGLQNLKEH SLTLIGLVGI KDPCRPGVRK AVEDCQCAGV NVKMITGDNV
701: FTARAMATEC GILRPDQDMT SEGRR

Best Arabidopsis Sequence Match ( AT3G22910.1 )
(BLAST)

0001: MRRNVSDHAE KKDKVGVEVL LELPKTLSKS NKKWQLALIK LYCSRTLLNC AKHAIRKPGL FPRSLSYTAI DLDHHHGDDH FKIDTETLND LVKNKNQEKL
0101: ESLGGPNGLV SALKSNTRLG INEEGDEIQR RRSTFGSNTY TRQPSKGLFH FVVEAFKDLT ILILLGCATL SLGFGIKEHG LKEGWYDGGS IFVAVFLVVA
0201: VSAVSNFRQN RQFDKLSKVS SNIKIDVVRN GRRQEISIFD IVVGDIVCLN IGDQVPADGV FVEGHLLHVD ESSMTGESDH VEVSLTGNTF LFSGTKIADG
0301: FGKMAVTSVG MNTAWGQMMS HISRDTNEQT PLQSRLDKLT SSIGKVGLLV AFLVLLVLLI RYFTGTTKDE SGNREYNGKT TKSDEIVNAV VKMVAAAVTI
0401: IVVAIPEGLP LAVTLTLAYS MKRMMKDNAM VRKLSACETM GSATVICTDK TGTLTLNQMK VTDFWFGLES GKASSVSQRV VELFHQGVAM NTTGSVFKAK
0501: AGTEYEFSGS PTEKAILSWA VEELEMGMEK VIEEHDVVHV EGFNSEKKRS GVLMKKKGVN TENNVVHWKG AAEKILAMCS TFCDGSGVVR EMKEDDKIQF
0601: EKIIQSMAAK SLRCIAFAYS EDNEDNKKLK EEKLSLLGII GIKDPCRPGV KKAVEDCQFA GVNIKMITGD NIFTARAIAV ECGILTPEDE MNSEAVLEGE
0701: KFRNYTQEER LEKVERIKVM ARSSPFDKLL MVKCLKELGH VVAVTGDGTN DAPALKEADI GLSMGIQGTE VAKESSDIVI LDDNFASVAT VLKWGRCVYN
0801: NIQKFIQFQL TVNVAALVIN FVAAVSAGDV PLTAVQLLWV NLIMDTLGAL ALATEKPTND LMKKKPIGRV APLITNIMWR NLLAQAFYQI SVLLVLQFRG
0901: RSIFNVTEKV KNTLIFNTFV LCQVFNEFNA RSLEKKNVFK GLHKNRLFIG IIVVTVVLQV VMVEFLKRFA DTERLNLGQW GVCIAIAAAS WPIGWLVKSV
1001: PVPERHFFSY LKWKKRS

Arabidopsis Description

ACA13Putative calcium-transporting ATPase 13, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.