Factsheet for VIT_05s0020g04220.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g04390.t01	Wine grape	plastid	42.61	86.56
VIT_05s0020g04380.t01	Wine grape	plasma membrane	42.36	86.07
VIT_05s0020g04240.t01	Wine grape	plasma membrane	39.79	85.39
VIT_05s0020g04300.t01	Wine grape	plasma membrane	42.7	83.78
PGSC0003DMT400096083	Potato	plasma membrane	12.55	82.96
PGSC0003DMT400062826	Potato	plasma membrane	14.06	82.81
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	42.27	81.52
VIT_05s0020g04280.t01	Wine grape	plastid	42.22	81.2
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	77.77	77.96
VIT_05s0020g04270.t01	Wine grape	plasma membrane	67.22	77.34
VIT_05s0020g04360.t01	Wine grape	plasma membrane	27.14	76.97
VIT_19s0014g01620.t01	Wine grape	plasma membrane	21.55	76.78
PGSC0003DMT400097702	Potato	plasma membrane	12.99	74.79
KRG93759	Soybean	plastid	36.77	73.47
VIT_05s0020g04350.t01	Wine grape	plasma membrane	11.09	71.7
CDY34219	Canola	plasma membrane	34.82	70.4
CDY40822	Canola	plasma membrane	34.78	70.37
Bra023790.1-P	Field mustard	plasma membrane	34.78	70.3
CDY10680	Canola	plasma membrane	34.63	70.22
AT3G22910.1	Thale cress	plasma membrane	34.58	69.91
Bra033900.1-P	Field mustard	plasma membrane	34.39	69.66
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	35.55	69.62
CDY10319	Canola	plasma membrane	34.44	69.07
PGSC0003DMT400096782	Potato	plasma membrane	21.4	67.9
VIT_14s0030g02110.t01	Wine grape	plasma membrane	32.2	66.94
PGSC0003DMT400089589	Potato	plasma membrane	25.49	66.58
Solyc09g082890.1.1	Tomato	peroxisome, plasma membrane	12.35	66.15
VIT_14s0030g02080.t01	Wine grape	plasma membrane	33.51	64.76
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	31.52	64.35
GSMUA_Achr7P25650_001	Banana	plasma membrane	22.47	62.43
PGSC0003DMT400089336	Potato	plasma membrane	27.43	62.32
GSMUA_Achr4P10650_001	Banana	mitochondrion	23.15	60.1
TraesCSU01G003600.1	Wheat	plastid	28.55	57.78
TraesCS1B01G346400.1	Wheat	plastid	28.65	57.75
TraesCS1D01G335500.1	Wheat	plastid	28.5	57.62
TraesCS1D01G335400.1	Wheat	plastid	28.55	57.55
TraesCS1A01G332800.1	Wheat	plastid	28.5	57.23
HORVU1Hr1G076950.3	Barley	plastid	28.6	57.2
EER91614	Sorghum	plasma membrane	28.11	57.11
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	28.02	56.8
Os10t0418100-01	Rice	golgi	28.55	56.72
PGSC0003DMT400093936	Potato	plasma membrane	33.56	55.96
TraesCS1D01G066500.1	Wheat	mitochondrion	22.76	55.45
HORVU0Hr1G016220.1	Barley	peroxisome, plasma membrane	21.84	51.85
VIT_11s0052g00320.t01	Wine grape	plasma membrane	26.17	49.81
Zm00001d043925_P001	Maize	plasma membrane	15.08	49.36
VIT_09s0018g02130.t01	Wine grape	plasma membrane	26.17	47.4
TraesCS4B01G007200.1	Wheat	cytosol, peroxisome, plasma membrane	21.45	45.51
VIT_18s0001g09150.t01	Wine grape	plasma membrane	21.25	42.93
VIT_13s0158g00360.t01	Wine grape	plasma membrane	21.45	42.57
TraesCS1A01G161100.1	Wheat	mitochondrion	15.27	42.38
VIT_07s0129g00180.t01	Wine grape	plasma membrane	20.91	42.2
VIT_08s0007g08960.t01	Wine grape	plasma membrane	21.11	42.01
VIT_07s0129g00110.t01	Wine grape	plasma membrane	10.46	40.19
VIT_00s0691g00010.t01	Wine grape	plasma membrane	15.03	39.67
VIT_00s0463g00030.t01	Wine grape	plasma membrane	17.36	35.14
VIT_06s0004g03900.t01	Wine grape	plasma membrane	13.62	26.39
VIT_08s0040g02830.t01	Wine grape	plasma membrane	13.23	25.59
VIT_15s0046g00040.t01	Wine grape	plasma membrane	13.04	25.5
VIT_18s0001g08850.t01	Wine grape	plasma membrane	11.33	25.13

Protein Annotations

Gene3D:1.20.1110.10	EntrezGene:100254645	wikigene:100254645	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10
Gene3D:3.40.50.1000	EMBL:AM433947	EMBL:AM436736	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C
InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ProteinID:CAN67182	ProteinID:CAN67182.1	ProteinID:CAN71613
ProteinID:CAN71613.1	ProteinID:CCB50466	ProteinID:CCB50466.1	UniProt:F6HDU5	EMBL:FN595749	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810
GO:GO:0006811	GO:GO:0006816	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0043231	GO:GO:0070588	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
InterPro:IPR023299	EntrezGene:LOC100254645	wikigene:LOC100254645	InterPro:P-type_ATPase_IIB	PFAM:PF00122	PFAM:PF00689
PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR24093
PANTHER:PTHR24093:SF414	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660
SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517	TMHMM:TMhelix	UniParc:UPI000210AA1D	ArrayExpress:VIT_05s0020g04220
EnsemblPlantsGene:VIT_05s0020g04220	EnsemblPlants:VIT_05s0020g04220.t01	unigene:Vvi.6618	RefSeq:XP_002283579	RefSeq:XP_002283579.1	SEG:seg

Description

Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HDU5]

Coordinates

chr5:-:5884388..5898902

Molecular Weight (calculated)

226661.0 Da

IEP (calculated)

8.070

GRAVY (calculated)

0.083

Length

2056 amino acids

Sequence
(BLAST)

0001: MSNILHVNLS SIGSLLDVPS TLSKPSKRWH LAFATIYCSR ALHSLLNDPL SNNKNKSRKL LLNTPPFVAL DVKPCSGFSD IDQTSLTDLV KAKNLDQLLE
0101: LGGVEGVAEA LKADFKNGIH GDVQDVARRK QEFGSNTYQK PPPKSILHFV VEAFEDLTIL VLLACATLSL GFGIKEHGVK EGWYDGGSIF LAVFLVISVS
0201: AVSNFKQNRQ FDKLSKVSNN IQVDVVRQGR RQQISIFEIV VGDVVCLKIG DQVPADGLFL DGHSLQVNES SMTGESDHVE VNTSLNPFLF SGTKIADGYG
0301: RMLVTSVGMN TTWGEMMSTI SRETNEQTPL QARLNKLTSS IGKVGLAVAF LVLVVLLVRY FTGNTEDENR NQEFNGSKTK ADDIVNAVVG IIAAAVTIVV
0401: VAIPEGLPLA VTLTLAYSMK RMMADQAMVR KLSACETMGS ATTICTDKTG TLTLNQMKVT KFWLGKQPIE AASSISTNLL KLIQQGVALN TTGSIYREPS
0501: SFKFEFSGSP TEKAILSWAV LELDMDMERM KKNYNILHVE AFNSEKKRSG ILIRKKADNT IHVHWKGAAE MILAMCSSYY DVSGSMKDMD DGERMIFEQI
0601: IQGMAASSLR CIALAHKQIP EEEHEIGEGP QKLKEDSLTL IALVGIKDPC RPGVRKAVED CQYAGVNVKM ITGDNIFTAR AIATECGILR PGQEMNSEAV
0701: VEGEVFRQYT QEERMEKVDK IHVMARSSPF DKLLMVQCLK QKGHVVAVTG DGTNDAPALK EADIGLSMGI QGTEVAKESS DIIILDDNFA SVATVLRWGR
0801: CVYNNIQKFI QFQLTVNVAA LVINFVAAAS AGEVPLTAVQ LLWVNLIMDT LGALALATER PTKELMEKPP VGRAEPLITN IMWRNLLAQA LYQIVVLLTL
0901: QFNGESIFGV NQKVKDTLIF NTFVLCQVFN EFNARELEKK NVFEGIHKNK LFLGIIGITI ILQVVMVEFL KKFADTERLD WGQWGACIGV AAASWPIGWL
1001: VKCIPVSDKP KYFVFIHINV MCGWKSEQLY PFLLVGSYGR MVGKRYDSDA SAAPPHSAGC YPFLLHFLAC GVAWTIKLIS CFGPNGILFC HLEKECPVFC
1101: MLSCMASLEN VPTILRKPIK RWRLAFATIY FSRTLRSLLH HPLSNNNSSC SKLPSSTPPF LVLDVKADAD FSNVDQTSLT ALVKEKNLDQ LLGFGGVEGV
1201: AVALRSDVKN GIHGAAKDVA WRQEAFGSNT YPRPPTKSFF HFVVEAFKDL TILVLLVCAT LSLCFGIKEH GLKEGWYDGG SILVAVFLVI SVSAVSNYRQ
1301: NRQFDKLSKV SNNIQSDNVE VNTSQNPFLF SGTKVADGYA LMLVTSVGMN TTWGQMMSTI SRDTNEQTPL QARLNELTSS IGKVGLTVAF LVLVVLLVRY
1401: FTGNTKDDNG NKEFNGRKTK SDDVVNAVVG IIASAVSILV MSIPEGLPLA VTLTLAYSMK RMMADQAMVR KLSACETMGS ATTICTDKTG TLTLNQMKVT
1501: KFWLGKQPIE ASSSIATNIL KLIQHGIALN TTGSIYRDTT AKLEFSGSPT EKAILSWSVQ ELGMDMEVLK KNCTILHVEA FNSEKKRSGI LMRKKTDNTI
1601: HVHWKGAAEM ILAMCSSYYD ASGRMKDLNV TERMTFEQII QGMAASSLRC IAFAHKQIPE EEHEIKEGRQ KIKEDSLTLI GLMGIKDPCR PGVRKAVEDC
1701: QHAGVNVKMI TGDNVFTARA IATECGILKA DQNMNSEVVI EGEAFRKYTP EERMEKVDKI CVMARSSPFD KLLMIRCLKQ KGHVVAVTGD GTNDAPALKE
1801: ADIGLSMGIQ GTEVAKESSD IIILDDNFAS VAMVLRWGRC VYNNIQKFIQ FQLTVNLAAL AINFVAVLSA GEVPLTAVQL LWVNLIMDTL GALALATEQP
1901: TKELMEKQPV GKVEPLITNI MWRNLLAQAL YQIAVLLTLQ FKGGSIFGVK DKIKNTLIFN TFVLCQVFNE FNARKLEKKN IFKGIHKNKL FLGVIGITVI
2001: LQVVMVEFLN KFADTERLDR GQWEACIAIA AMSWPIGFVV KCIPVSEKPF LRYLKW

Best Arabidopsis Sequence Match ( AT3G22910.1 )
(BLAST)

0001: MRRNVSDHAE KKDKVGVEVL LELPKTLSKS NKKWQLALIK LYCSRTLLNC AKHAIRKPGL FPRSLSYTAI DLDHHHGDDH FKIDTETLND LVKNKNQEKL
0101: ESLGGPNGLV SALKSNTRLG INEEGDEIQR RRSTFGSNTY TRQPSKGLFH FVVEAFKDLT ILILLGCATL SLGFGIKEHG LKEGWYDGGS IFVAVFLVVA
0201: VSAVSNFRQN RQFDKLSKVS SNIKIDVVRN GRRQEISIFD IVVGDIVCLN IGDQVPADGV FVEGHLLHVD ESSMTGESDH VEVSLTGNTF LFSGTKIADG
0301: FGKMAVTSVG MNTAWGQMMS HISRDTNEQT PLQSRLDKLT SSIGKVGLLV AFLVLLVLLI RYFTGTTKDE SGNREYNGKT TKSDEIVNAV VKMVAAAVTI
0401: IVVAIPEGLP LAVTLTLAYS MKRMMKDNAM VRKLSACETM GSATVICTDK TGTLTLNQMK VTDFWFGLES GKASSVSQRV VELFHQGVAM NTTGSVFKAK
0501: AGTEYEFSGS PTEKAILSWA VEELEMGMEK VIEEHDVVHV EGFNSEKKRS GVLMKKKGVN TENNVVHWKG AAEKILAMCS TFCDGSGVVR EMKEDDKIQF
0601: EKIIQSMAAK SLRCIAFAYS EDNEDNKKLK EEKLSLLGII GIKDPCRPGV KKAVEDCQFA GVNIKMITGD NIFTARAIAV ECGILTPEDE MNSEAVLEGE
0701: KFRNYTQEER LEKVERIKVM ARSSPFDKLL MVKCLKELGH VVAVTGDGTN DAPALKEADI GLSMGIQGTE VAKESSDIVI LDDNFASVAT VLKWGRCVYN
0801: NIQKFIQFQL TVNVAALVIN FVAAVSAGDV PLTAVQLLWV NLIMDTLGAL ALATEKPTND LMKKKPIGRV APLITNIMWR NLLAQAFYQI SVLLVLQFRG
0901: RSIFNVTEKV KNTLIFNTFV LCQVFNEFNA RSLEKKNVFK GLHKNRLFIG IIVVTVVLQV VMVEFLKRFA DTERLNLGQW GVCIAIAAAS WPIGWLVKSV
1001: PVPERHFFSY LKWKKRS

Arabidopsis Description

ACA13Putative calcium-transporting ATPase 13, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.