Factsheet for VIT_05s0020g04330.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 1
mitochondrion 3
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g04300.t01	Wine grape	plasma membrane	47.59	93.13
VIT_05s0020g04280.t01	Wine grape	plastid	45.44	87.18
VIT_05s0020g04390.t01	Wine grape	plastid	42.37	85.87
VIT_05s0020g04380.t01	Wine grape	plasma membrane	42.32	85.77
PGSC0003DMT400096083	Potato	plasma membrane	12.43	81.99
PGSC0003DMT400062826	Potato	plasma membrane	13.94	81.95
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	42.27	81.33
VIT_05s0020g04270.t01	Wine grape	plasma membrane	70.6	81.03
VIT_05s0020g04240.t01	Wine grape	plasma membrane	37.35	79.96
VIT_05s0020g04220.t01	Wine grape	plastid	77.96	77.77
VIT_05s0020g04360.t01	Wine grape	plasma membrane	27.16	76.83
VIT_19s0014g01620.t01	Wine grape	plasma membrane	21.4	76.08
KRG93759	Soybean	plastid	37.01	73.76
PGSC0003DMT400097702	Potato	plasma membrane	12.68	72.83
VIT_05s0020g04350.t01	Wine grape	plasma membrane	10.87	70.13
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	35.54	69.43
CDY34219	Canola	plasma membrane	34.42	69.42
CDY40822	Canola	plasma membrane	34.37	69.39
Bra023790.1-P	Field mustard	plasma membrane	34.37	69.32
AT3G22910.1	Thale cress	plasma membrane	34.08	68.73
CDY10680	Canola	plasma membrane	33.89	68.54
Bra033900.1-P	Field mustard	plasma membrane	33.69	68.08
CDY10319	Canola	plasma membrane	33.79	67.61
VIT_14s0030g02110.t01	Wine grape	plasma membrane	32.37	67.14
PGSC0003DMT400096782	Potato	plasma membrane	21.16	66.98
PGSC0003DMT400089589	Potato	plasma membrane	25.16	65.57
VIT_14s0030g02080.t01	Wine grape	plasma membrane	33.5	64.57
Solyc09g082890.1.1	Tomato	peroxisome, plasma membrane	12.04	64.32
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	31.55	64.25
GSMUA_Achr7P25650_001	Banana	plasma membrane	22.87	63.38
PGSC0003DMT400089336	Potato	plasma membrane	27.21	61.66
GSMUA_Achr4P10650_001	Banana	mitochondrion	23.21	60.1
TraesCS1D01G335500.1	Wheat	plastid	28.33	57.13
TraesCSU01G003600.1	Wheat	plastid	28.23	56.99
EER91614	Sorghum	plasma membrane	28.08	56.92
TraesCS1D01G335400.1	Wheat	plastid	28.28	56.86
TraesCS1B01G346400.1	Wheat	plastid	28.23	56.76
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	27.99	56.61
HORVU1Hr1G076950.3	Barley	plastid	28.33	56.52
TraesCS1A01G332800.1	Wheat	plastid	28.18	56.45
Os10t0418100-01	Rice	golgi	27.99	55.46
PGSC0003DMT400093936	Potato	plasma membrane	33.15	55.15
TraesCS1D01G066500.1	Wheat	mitochondrion	22.38	54.38
HORVU0Hr1G016220.1	Barley	peroxisome, plasma membrane	21.99	52.08
Zm00001d043925_P001	Maize	plasma membrane	15.16	49.52
VIT_11s0052g00320.t01	Wine grape	plasma membrane	25.89	49.17
VIT_09s0018g02130.t01	Wine grape	plasma membrane	25.94	46.87
TraesCS4B01G007200.1	Wheat	cytosol, peroxisome, plasma membrane	21.55	45.61
VIT_18s0001g09150.t01	Wine grape	plasma membrane	21.5	43.32
TraesCS1A01G161100.1	Wheat	mitochondrion	15.41	42.65
VIT_07s0129g00180.t01	Wine grape	plasma membrane	21.16	42.59
VIT_13s0158g00360.t01	Wine grape	plasma membrane	21.31	42.18
VIT_08s0007g08960.t01	Wine grape	plasma membrane	21.06	41.82
VIT_07s0129g00110.t01	Wine grape	plasma membrane	10.53	40.37
VIT_00s0691g00010.t01	Wine grape	plasma membrane	15.26	40.18
VIT_00s0463g00030.t01	Wine grape	plasma membrane	17.65	35.63
VIT_06s0004g03900.t01	Wine grape	plasma membrane	13.85	26.77
VIT_15s0046g00040.t01	Wine grape	plasma membrane	13.36	26.07
VIT_08s0040g02830.t01	Wine grape	plasma membrane	13.41	25.87
VIT_18s0001g08850.t01	Wine grape	plasma membrane	11.56	25.57

Protein Annotations

Gene3D:1.20.1110.10	EntrezGene:100257973	wikigene:100257973	EntrezGene:100261329	wikigene:100261329	Gene3D:2.70.150.10
MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C
InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ProteinID:CCB50473	ProteinID:CCB50473.1	UniProt:F6HDV2
EMBL:FN595749	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005886
GO:GO:0005887	GO:GO:0006810	GO:GO:0006811	GO:GO:0006816	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0043231	GO:GO:0070588	GO:GO:0099132	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	EntrezGene:LOC100257973	wikigene:LOC100257973	EntrezGene:LOC100261329
wikigene:LOC100261329	InterPro:P-type_ATPase_IIB	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF00702
PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR24093	PANTHER:PTHR24093:SF414	InterPro:P_typ_ATPase
SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01517	TMHMM:TMhelix	UniParc:UPI000210AA23	ArrayExpress:VIT_05s0020g04330	EnsemblPlantsGene:VIT_05s0020g04330	EnsemblPlants:VIT_05s0020g04330.t01
unigene:Vvi.17815	RefSeq:XP_002279818	RefSeq:XP_002279818.1	RefSeq:XP_003631969	RefSeq:XP_003631969.1	SEG:seg

Description

Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HDV2]

Coordinates

chr5:-:6056509..6085843

Molecular Weight (calculated)

226115.0 Da

IEP (calculated)

7.543

GRAVY (calculated)

0.038

Length

2051 amino acids

Sequence
(BLAST)

0001: MGWLKVSTSR WHSILDVPAT LGRHNKRWHL AFATIYCSRA LHSLLKQKKG SKPPVSTHSC VVLSVEPHLA FPNIDHTSLT AVVKEKSLDQ LRELGGVEGV
0101: ADALKTHTKN GIHGAVEDVA ERQETFGSNT YPRPPTKSFF YFVLEAFKDL TILILLACAT LSLGFGIKEH GLKEGWYDGG SIFVAVFLVI SVSAVSNFRQ
0201: NRQLETLSKV SNNIEVEVVR DGHRQKISIF GIVVGDVACL KIGDQVPADG LFLAGHSLQV DESSMTGESD HVEINSSQNP FLFSGTKVAD GYAQMLVTSV
0301: GMNTTWGEMM STISHDNNEQ TPLQARLNKL TSSIGKVGLA VAFLVLVMLV VRYFTGNTED ENGNQEFNGS KTKADDIVNA MVRIIAAAVT IVVVAIPEGL
0401: PLAVTLTLAY SMKRMMADQA MVRKLSACET MGSATTICTD KTGTLTLNQM KVTKYWLGKE PVEDSSSIAT NILKLIQQGV ALNTTGSIYR ATSKSEFEFS
0501: GSPTEKALLS WAVLELDMDM ERLKQNYTIL HVEAFNSEKK RSGILMRKKA DNKIHVHWKG AAEMILAMCS SYYDASGSMK ELDDGERMTF EQIIQGMAAS
0601: SLRCIAFAHE QIPEEEQEIR EGRQKLKEDS LTLIGLVGIK DPCRPGVRKA VEDCQYAGVN VKMITGDNVF TARAIATECG ILRPDQDMNS EAVVEGEIFR
0701: KYTSEERMEK VDKICVMARS SPFDKLLMVQ CLKQKGHVVA VTGDGTNDAP ALKEADIGLS MGIQGTEVAK EGSDIIILDD NFASVATVLR WGRCVYDNIQ
0801: KFIQFQLTVN VAALVINFVA AVSAGEVPLT AVQLLWVNLI MDTLGALALA TEQPTKELME KPPMGRKEPL ISNVMWRNLL AQALYQIAIL LTLQFKGRSI
0901: FGVSEKVKDT LIFNTFVLCQ VFNEFNARKL EKKNVFKGLH KNKLFLGIIG ITIILQVVMV EFLKKFADTE RLDWGQWGAC IGIAAASWPI GWLLQWQRRV
1001: GRYSGGDGIG RKRIYEERKL QFSFPSFFFL SSWYVTLLKS LSSILHVNSS CRESILDVPA TRGRHNKRWH LAFATIYCSR ALHSLLNKKS SKPPVSTHSF
1101: VVLSVEPHLA FPNIDHTSLT AVVKEKNLDQ LRELGGVEGV ADALKTDTKN GIHGAVEDVA ERQETFGSNT YPRPPTKSFF YFVLEAFKDL TILILLACAT
1201: LSLGFGIKEH GPKEGWYDGG SIFVAVFLVI SVSAVSNFRQ NRQFEKLSKV SNNIEVEVVR GGHRQKISIF DIVVGDVACL QIGDQVPADG LFLAGHSLQV
1301: DESSMTGKSD YVEVNSSHNP FLFSGTKVAD GYAQMLVTSV GMNTTWGEMM STISRDTNEQ TPLQARLNKL TSSIGKVGMA VAFLVLVVSL ARYFTGITED
1401: ENGNREFIGS NIKAVDMVNS MVTIIAAAFT ILAVAIPKGL LLAVTLILTY SMKRMMADQA MVRKLSACET MGSATTICTD KTGTLTLNQM KVTKYWLGKE
1501: PVEDSSSIAT NVLKLIQQGV ALNTTGSVYK ASSGSSKFEF SGSPTEKAIL SWAVLELDMD MEILKQNCTI LHVEAFNSEK KRSGVSIRSK ADNTIHVHWK
1601: GAAEMILAMC SRYYDASGSM KDMDDGERMI FEQIIQGMAA SSLRCIAFAH TQIPGEQHEI GVGLQNLKEH SLTLIGLVGI KDPCRPGVRK AVEDCQCAGV
1701: NVKMITGDNV FTARAMATEC GILRPDQDMT SEAVVEGEVF RNYTPEERLE KVDKIHVMAR SSPFDKLLMV RCLKQKGHVV AVTGDGSNDA PALKEAHIGL
1801: SMGIHGTEVA KESSDIIILD DNFTSVATVL RWGRSVYDSI QKLVQLQLTM NVAALVINVV AAVSAREVPF TVLKLLWVNL ILDKLCALTF ATGQPTKDLM
1901: EEPPVRRTQS LITNIMWRNI LGQALYQIAV VLTLQFSGES IFDVNEKVKD TLILNTSVLC QVFNQVNARK LEKKNVFEGM HKNKLFWGII GITIILEVVV
2001: VEFLKKFADT ERLSWKQWGA CIGMAALSWP IGWVVKCLPV SDKPFLSYLN W

Best Arabidopsis Sequence Match ( AT3G22910.1 )
(BLAST)

0001: MRRNVSDHAE KKDKVGVEVL LELPKTLSKS NKKWQLALIK LYCSRTLLNC AKHAIRKPGL FPRSLSYTAI DLDHHHGDDH FKIDTETLND LVKNKNQEKL
0101: ESLGGPNGLV SALKSNTRLG INEEGDEIQR RRSTFGSNTY TRQPSKGLFH FVVEAFKDLT ILILLGCATL SLGFGIKEHG LKEGWYDGGS IFVAVFLVVA
0201: VSAVSNFRQN RQFDKLSKVS SNIKIDVVRN GRRQEISIFD IVVGDIVCLN IGDQVPADGV FVEGHLLHVD ESSMTGESDH VEVSLTGNTF LFSGTKIADG
0301: FGKMAVTSVG MNTAWGQMMS HISRDTNEQT PLQSRLDKLT SSIGKVGLLV AFLVLLVLLI RYFTGTTKDE SGNREYNGKT TKSDEIVNAV VKMVAAAVTI
0401: IVVAIPEGLP LAVTLTLAYS MKRMMKDNAM VRKLSACETM GSATVICTDK TGTLTLNQMK VTDFWFGLES GKASSVSQRV VELFHQGVAM NTTGSVFKAK
0501: AGTEYEFSGS PTEKAILSWA VEELEMGMEK VIEEHDVVHV EGFNSEKKRS GVLMKKKGVN TENNVVHWKG AAEKILAMCS TFCDGSGVVR EMKEDDKIQF
0601: EKIIQSMAAK SLRCIAFAYS EDNEDNKKLK EEKLSLLGII GIKDPCRPGV KKAVEDCQFA GVNIKMITGD NIFTARAIAV ECGILTPEDE MNSEAVLEGE
0701: KFRNYTQEER LEKVERIKVM ARSSPFDKLL MVKCLKELGH VVAVTGDGTN DAPALKEADI GLSMGIQGTE VAKESSDIVI LDDNFASVAT VLKWGRCVYN
0801: NIQKFIQFQL TVNVAALVIN FVAAVSAGDV PLTAVQLLWV NLIMDTLGAL ALATEKPTND LMKKKPIGRV APLITNIMWR NLLAQAFYQI SVLLVLQFRG
0901: RSIFNVTEKV KNTLIFNTFV LCQVFNEFNA RSLEKKNVFK GLHKNRLFIG IIVVTVVLQV VMVEFLKRFA DTERLNLGQW GVCIAIAAAS WPIGWLVKSV
1001: PVPERHFFSY LKWKKRS

Arabidopsis Description

ACA13Putative calcium-transporting ATPase 13, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.