Factsheet for PGSC0003DMT400089336

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 1
cytosol 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400096782	Potato	plasma membrane	66.74	93.21
Solyc09g082890.1.1	Tomato	peroxisome, plasma membrane	36.69	86.46
PGSC0003DMT400089589	Potato	plasma membrane	69.61	80.05
VIT_05s0020g04360.t01	Wine grape	plasma membrane	47.62	59.45
PGSC0003DMT400093936	Potato	plasma membrane	76.13	55.88
VIT_05s0020g04390.t01	Wine grape	plastid	61.44	54.94
VIT_05s0020g04380.t01	Wine grape	plasma membrane	60.99	54.55
VIT_05s0020g04300.t01	Wine grape	plasma membrane	62.1	53.63
VIT_05s0020g04240.t01	Wine grape	plasma membrane	55.8	52.71
KRG93759	Soybean	plastid	59.89	52.67
CDY40822	Canola	plasma membrane	58.9	52.46
VIT_05s0020g04280.t01	Wine grape	plastid	61.44	52.01
CDY34219	Canola	plasma membrane	58.23	51.82
Bra023790.1-P	Field mustard	plasma membrane	58.23	51.82
CDY10680	Canola	plasma membrane	57.68	51.48
Bra033900.1-P	Field mustard	plasma membrane	57.35	51.13
AT3G22910.1	Thale cress	plasma membrane	57.24	50.93
CDY10319	Canola	plasma membrane	57.24	50.54
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	58.67	49.81
Zm00001d043925_P001	Maize	plasma membrane	33.15	47.77
PGSC0003DMT400050008	Potato	plasma membrane	52.49	47.22
HORVU1Hr1G076950.3	Barley	plastid	48.95	43.09
TraesCS1D01G335500.1	Wheat	plastid	48.29	42.97
TraesCS1B01G346400.1	Wheat	plastid	48.18	42.75
TraesCSU01G003600.1	Wheat	plastid	47.96	42.72
GSMUA_Achr7P25650_001	Banana	plasma membrane	34.92	42.7
TraesCS1D01G335400.1	Wheat	plastid	47.96	42.55
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	47.62	42.5
TraesCS1A01G332800.1	Wheat	plastid	48.07	42.48
GSMUA_Achr4P10650_001	Banana	mitochondrion	37.13	42.42
EER91614	Sorghum	plasma membrane	47.18	42.19
Os10t0418100-01	Rice	golgi	47.96	41.93
PGSC0003DMT400062826	Potato	plasma membrane	15.8	40.97
PGSC0003DMT400096083	Potato	plasma membrane	14.03	40.84
TraesCS1D01G066500.1	Wheat	mitochondrion	37.57	40.28
VIT_19s0014g01620.t01	Wine grape	plasma membrane	25.52	40.03
HORVU0Hr1G016220.1	Barley	peroxisome, plasma membrane	36.57	38.22
TraesCS4B01G007200.1	Wheat	cytosol, peroxisome, plasma membrane	37.68	35.19
PGSC0003DMT400097702	Potato	plasma membrane	13.7	34.73
PGSC0003DMT400094259	Potato	plasma membrane	34.25	34.41
PGSC0003DMT400021028	Potato	plasma membrane	35.36	34.04
PGSC0003DMT400048740	Potato	plastid	37.57	33.07
PGSC0003DMT400033064	Potato	plasma membrane	35.91	31.07
PGSC0003DMT400033890	Potato	cytosol, peroxisome, plasma membrane	34.14	30.38
PGSC0003DMT400055386	Potato	plasma membrane	33.92	30.22
PGSC0003DMT400055192	Potato	plasma membrane	33.37	29.7
TraesCS1A01G161100.1	Wheat	mitochondrion	23.2	28.34
VIT_05s0020g04270.t01	Wine grape	plasma membrane	55.58	28.15
VIT_05s0020g04220.t01	Wine grape	plastid	62.32	27.43
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	61.66	27.21
VIT_05s0020g04350.t01	Wine grape	plasma membrane	8.73	24.84
PGSC0003DMT400000352	Potato	peroxisome	21.88	18.89
PGSC0003DMT400040184	Potato	plasma membrane	21.55	18.38

Protein Annotations

MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C
InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810
GO:GO:0006811	GO:GO:0006816	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0070588	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299
UniProt:M1DHY7	InterPro:P-type_ATPase_IIB	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF00702
EnsemblPlantsGene:PGSC0003DMG400038907	PGSC:PGSC0003DMG400038907	EnsemblPlants:PGSC0003DMT400089336	PRINTS:PR00119	PRINTS:PR00121	ScanProsite:PS00154
PANTHER:PTHR24093	PANTHER:PTHR24093:SF414	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517	TMHMM:TMhelix	UniParc:UPI0002957C5B
SEG:seg	:	:	:	:	:

Description

Autoinhibited calcium ATPase [Source:PGSC_GENE;Acc:PGSC0003DMG400038907]

Coordinates

chr9:-:54695867..54698678

Molecular Weight (calculated)

99638.2 Da

IEP (calculated)

7.822

GRAVY (calculated)

-0.078

Length

905 amino acids

Sequence
(BLAST)

001: MNRITTDLSK EIETSNKKRW HLAFATIYCS RAFKTAYSHG SPAYNPRKIL CVSNDTIAID VVQHHPFFSG IDQSSLAKLV KDKNFDELAN IGGVQGVAAS
101: LKSDTTNGVS GDSEDVARRH EAFGSNTYRK APTKSFFVFV WESFKDPTII ILLLCAALSL GFGIKEHGLK EGWYDGGSIY VAVFLVIAVS SISNFRQNRQ
201: FDKLSKVSKN IPVEAVRKGR RQQISIFEIV VGDVICLKIG DQVPADGILV EGHSLQVDES SMTGESDHVA INISQNPFLI SGTKVVDGYG MMLVISVGMN
301: TTWGEMMSQI SSNSNEQTPL QERLNKLTTS IGKVGLLVAF LVLVVLLVRY FTGTTKDENG NKEFNGSKTS SDDVINAVVG IVAAAVTIVV VAIPEGLPLA
401: VTLTLAYSMK RMMADQAMVR KLSACETMGS ATTICTDKTG TLTLNKMTVT KFFLGKQHVK AESHTSISAK VHELFHQGVG LNTTGSVFKS SDPSSSFEFS
501: GSPTEKAILS WAVMELNMEM DQIKRNFNIL HVEAFNSEKK KSGVLIKNIS DGTIHAHWKG AAEMISRMCS HYYDLEGNVK PLEESDKEEC DRIIEGMAAS
601: SLRCIAFAHK QVSKAEQKDN EHMHGNVPDN SFILLGFVGL KDPCRPGVKK AVEACQSAGV NIKMITGDNV FTAKAIATEC GILHPNQEVD EGAVIEGEEF
701: RNLTDEVRME RVEKIRVMAR SSPFDKLLMV QCLRKKGHVV AVTGDGTNDA PALKEADIGL SMGIQGTDDR EANRGTHEEE TSRGESIFGV SKRVNDTLIF
801: NTFVLCQVFN EFNARNLEKK NVFKGIHKNK LFMAIIGITL VLQVVMVEFL KKFANTERLN WGQWGICIGF AAASWPIGWL VKCINVPERP FFSYLRLNYL
901: KALFK

Best Arabidopsis Sequence Match ( AT3G22910.1 )
(BLAST)

0001: MRRNVSDHAE KKDKVGVEVL LELPKTLSKS NKKWQLALIK LYCSRTLLNC AKHAIRKPGL FPRSLSYTAI DLDHHHGDDH FKIDTETLND LVKNKNQEKL
0101: ESLGGPNGLV SALKSNTRLG INEEGDEIQR RRSTFGSNTY TRQPSKGLFH FVVEAFKDLT ILILLGCATL SLGFGIKEHG LKEGWYDGGS IFVAVFLVVA
0201: VSAVSNFRQN RQFDKLSKVS SNIKIDVVRN GRRQEISIFD IVVGDIVCLN IGDQVPADGV FVEGHLLHVD ESSMTGESDH VEVSLTGNTF LFSGTKIADG
0301: FGKMAVTSVG MNTAWGQMMS HISRDTNEQT PLQSRLDKLT SSIGKVGLLV AFLVLLVLLI RYFTGTTKDE SGNREYNGKT TKSDEIVNAV VKMVAAAVTI
0401: IVVAIPEGLP LAVTLTLAYS MKRMMKDNAM VRKLSACETM GSATVICTDK TGTLTLNQMK VTDFWFGLES GKASSVSQRV VELFHQGVAM NTTGSVFKAK
0501: AGTEYEFSGS PTEKAILSWA VEELEMGMEK VIEEHDVVHV EGFNSEKKRS GVLMKKKGVN TENNVVHWKG AAEKILAMCS TFCDGSGVVR EMKEDDKIQF
0601: EKIIQSMAAK SLRCIAFAYS EDNEDNKKLK EEKLSLLGII GIKDPCRPGV KKAVEDCQFA GVNIKMITGD NIFTARAIAV ECGILTPEDE MNSEAVLEGE
0701: KFRNYTQEER LEKVERIKVM ARSSPFDKLL MVKCLKELGH VVAVTGDGTN DAPALKEADI GLSMGIQGTE VAKESSDIVI LDDNFASVAT VLKWGRCVYN
0801: NIQKFIQFQL TVNVAALVIN FVAAVSAGDV PLTAVQLLWV NLIMDTLGAL ALATEKPTND LMKKKPIGRV APLITNIMWR NLLAQAFYQI SVLLVLQFRG
0901: RSIFNVTEKV KNTLIFNTFV LCQVFNEFNA RSLEKKNVFK GLHKNRLFIG IIVVTVVLQV VMVEFLKRFA DTERLNLGQW GVCIAIAAAS WPIGWLVKSV
1001: PVPERHFFSY LKWKKRS

Arabidopsis Description

ACA13Putative calcium-transporting ATPase 13, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.