Factsheet for PGSC0003DMT400040184

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
endoplasmic reticulum 2
peroxisome 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g072880.1.1	Tomato	nucleus, plastid, unclear	97.55	97.55
CDY06279	Canola	plasma membrane	29.97	84.8
VIT_06s0004g03900.t01	Wine grape	plasma membrane	83.32	83.32
Os05t0120700-01	Rice	plasma membrane	21.68	81.85
AT1G07810.1	Thale cress	plasma membrane	80.96	80.96
KRG95874	Soybean	endoplasmic reticulum	80.87	80.94
AT1G07670.2	Thale cress	plasma membrane	80.77	80.77
CDX95122	Canola	cytosol, plasma membrane, vacuole	23.28	80.72
KRH67591	Soybean	endoplasmic reticulum	80.21	80.28
Bra031583.1-P	Field mustard	plasma membrane	72.48	79.77
CDY06268	Canola	plasma membrane	76.63	79.71
CDY09907	Canola	plasma membrane	76.44	79.67
Bra031593.1-P	Field mustard	plasma membrane	79.55	79.62
CDY28053	Canola	plasma membrane	78.23	76.29
CDY22720	Canola	peroxisome, plasma membrane	71.91	75.77
TraesCS1D01G047900.1	Wheat	plasma membrane	75.02	75.52
TraesCS1B01G060700.1	Wheat	golgi	75.21	75.5
TraesCS1A01G047000.1	Wheat	plasma membrane	75.21	75.5
HORVU1Hr1G007310.1	Barley	plasma membrane	74.55	75.41
Zm00001d028687_P001	Maize	extracellular, mitochondrion	75.4	75.4
EER92445	Sorghum	plasma membrane	75.4	75.4
Zm00001d047769_P001	Maize	plasma membrane	75.12	75.05
Os03t0281600-01	Rice	plasma membrane	59.75	75.03
CDY35928	Canola	plasma membrane	73.42	74.76
GSMUA_Achr6P15410_001	Banana	plasma membrane	63.05	74.75
TraesCS4B01G201500.2	Wheat	golgi	74.65	74.58
TraesCS4A01G103000.2	Wheat	unclear	74.65	74.58
TraesCS4D01G202200.2	Wheat	plasma membrane	74.55	74.48
GSMUA_Achr2P16100_001	Banana	plasma membrane	63.81	74.4
EES18919	Sorghum	plasma membrane	73.7	73.91
Zm00001d011013_P001	Maize	plasma membrane	72.86	73.48
CDY68458	Canola	cytosol, peroxisome, plasma membrane	45.43	72.37
HORVU4Hr1G058210.4	Barley	plastid	71.91	70.45
Bra029645.1-P	Field mustard	plasma membrane, plastid	79.08	70.27
GSMUA_Achr3P17740_001	Banana	plasma membrane	67.2	69.97
GSMUA_Achr10P...	Banana	plasma membrane	58.53	69.62
CDY61305	Canola	cytosol	31.39	68.38
PGSC0003DMT400000352	Potato	peroxisome	66.26	67.08
PGSC0003DMT400062826	Potato	plasma membrane	11.03	33.52
PGSC0003DMT400096083	Potato	plasma membrane	9.52	32.48
PGSC0003DMT400097702	Potato	plasma membrane	9.99	29.69
PGSC0003DMT400021028	Potato	plasma membrane	26.01	29.36
PGSC0003DMT400055386	Potato	plasma membrane	27.52	28.74
PGSC0003DMT400055192	Potato	plasma membrane	27.43	28.61
PGSC0003DMT400033890	Potato	cytosol, peroxisome, plasma membrane	27.05	28.22
PGSC0003DMT400050008	Potato	plasma membrane	26.58	28.03
PGSC0003DMT400033064	Potato	plasma membrane	26.96	27.34
PGSC0003DMT400096782	Potato	plasma membrane	16.21	26.54
PGSC0003DMT400094259	Potato	plasma membrane	19.7	23.2
PGSC0003DMT400089589	Potato	plasma membrane	16.49	22.24
PGSC0003DMT400089336	Potato	plasma membrane	18.38	21.55
PGSC0003DMT400048740	Potato	plastid	20.74	21.4
PGSC0003DMT400093936	Potato	plasma membrane	24.79	21.33

Protein Annotations

Gene3D:1.20.1110.10	EntrezGene:102605714	Gene3D:2.70.150.10	MapMan:24.1.2.2.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
InterPro:IPR023299	UniProt:M1B9H1	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF00702
EnsemblPlantsGene:PGSC0003DMG400015546	PGSC:PGSC0003DMG400015546	EnsemblPlants:PGSC0003DMT400040184	PRINTS:PR00119	ScanProsite:PS00154	PANTHER:PTHR42861
PANTHER:PTHR42861:SF3	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660
SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TMHMM:TMhelix	UniParc:UPI00029608A3	RefSeq:XP_006363343.1	SEG:seg

Description

Endoplasmic reticulum [ER]-type calcium ATPase [Source:PGSC_GENE;Acc:PGSC0003DMG400015546]

Coordinates

chr11:-:45053368..45060627

Molecular Weight (calculated)

116073.0 Da

IEP (calculated)

5.141

GRAVY (calculated)

0.037

Length

1061 amino acids

Sequence
(BLAST)

0001: MGKGGENYGK RENLGGKSVS DKEVFPAWSK DVKECEEKFE VKRDYGLSED EVVKRRQIYG FNELEKHEGQ SILKLILDQF NDTLVRILLG AAVISFVLAW
0101: LDGEEGGEKE ITAFVEPLVI FLILIVNAAV GVWQESNAEK ALEALKEIQS ETACVIRDGK RISSLPAKEL VPGDIVELKV GDKVPADMRV LRLISSTLRL
0201: EQGSLTGESE AVSKTTKAVA EDVDIQGKKC MVFAGTTVVN GNCICLVTQI GMDTEIGKVH SQIHEAAQEE EDTPLKKKLN EFGEALTVII GIICALVWLI
0301: NVKYFLTWEI VDGWPRNFKF SFEKCTYYFE IAVALAVAAI PEGLPAVITT CLALGTRKMA AKNALVRKLP SVETLGCTTV ICSDKTGTLT TNQMAVSKLV
0401: ALGAKANTVR SFNVEGTSYD PFDGKIQDWP MGHMDANLEM IAKIAAVCND SGVEKSGQHY VASGLPTEAA LKVLVEKMGL PDRVSSISSS SDKDGLRCSY
0501: TWNKIEKRIG TLEFDRDRKS MGVITSSTSG RKSLLVKGAV ENLLERSSYV QLQDGSVVEL DSSSRNHILQ SLHEMSSKAL RVLGFAYKED LQEFTTYNGD
0601: EDHPAHQLLL NPANYPSIES KLIFVGLAGI RDPPRKEVRG AIEDCREAGI RVMVITGDNK NTAEAICREI GVFGSHEDIS SRSLTGKEFM ELANPKAHIR
0701: QSGGLLFSRA EPRHKQDIVR LLKDDGEVVA MTGDGVNDAP ALKLADIGIA MGIAGTEVAK EASDMVLADD NFSTIVAAVG EGRSIYNNMK AFIRYMISSN
0801: IGEVASIFLT AALGIPEGLI PVQLLWVNLV TDGPPATALG FNPPDKDIMK KQPRRSDDSL ISAWILFRYL VIGLYVGVAT VGVFIIWFTH DSFLGIDLSK
0901: DGHSLVTYSQ LANWGQCKTW NNFTASPYTA GSEVISFDNP CDYFVEGKVK AMTLSLSVLV AIEMFNSLNA LSEDGSLLSM PPWVNPWLLL AMSVSFGLHF
1001: LILYVPFLAQ IFGIVPLSLN EWLLVLAVAL PVILIDEILK FIGRCTSGIR SGRSRTKQKE E

Best Arabidopsis Sequence Match ( AT1G07810.1 )
(BLAST)

0001: MGKGSEDLVK KESLNSTPVN SDTFPAWAKD VAECEEHFVV SREKGLSSDE VLKRHQIYGL NELEKPEGTS IFKLILEQFN DTLVRILLAA AVISFVLAFF
0101: DGDEGGEMGI TAFVEPLVIF LILIVNAIVG IWQETNAEKA LEALKEIQSQ QATVMRDGTK VSSLPAKELV PGDIVELRVG DKVPADMRVV ALISSTLRVE
0201: QGSLTGESEA VSKTTKHVDE NADIQGKKCM VFAGTTVVNG NCICLVTDTG MNTEIGRVHS QIQEAAQHEE DTPLKKKLNE FGEVLTMIIG LICALVWLIN
0301: VKYFLSWEYV DGWPRNFKFS FEKCTYYFEI AVALAVAAIP EGLPAVITTC LALGTRKMAQ KNALVRKLPS VETLGCTTVI CSDKTGTLTT NQMAVSKLVA
0401: MGSRIGTLRS FNVEGTSFDP RDGKIEDWPM GRMDANLQMI AKIAAICNDA NVEQSDQQFV SRGMPTEAAL KVLVEKMGFP EGLNEASSDG DVLRCCRLWS
0501: ELEQRIATLE FDRDRKSMGV MVDSSSGNKL LLVKGAVENV LERSTHIQLL DGSKRELDQY SRDLILQSLR DMSLSALRCL GFAYSDVPSD FATYDGSEDH
0601: PAHQQLLNPS NYSSIESNLI FVGFVGLRDP PRKEVRQAIA DCRTAGIRVM VITGDNKSTA EAICREIGVF EADEDISSRS LTGIEFMDVQ DQKNHLRQTG
0701: GLLFSRAEPK HKQEIVRLLK EDGEVVAMTG DGVNDAPALK LADIGVAMGI SGTEVAKEAS DMVLADDNFS TIVAAVGEGR SIYNNMKAFI RYMISSNIGE
0801: VASIFLTAAL GIPEGMIPVQ LLWVNLVTDG PPATALGFNP PDKDIMKKPP RRSDDSLITA WILFRYMVIG LYVGVATVGV FIIWYTHSSF MGIDLSQDGH
0901: SLVSYSQLAH WGQCSSWEGF KVSPFTAGSQ TFSFDSNPCD YFQQGKIKAS TLSLSVLVAI EMFNSLNALS EDGSLVTMPP WVNPWLLLAM AVSFGLHFVI
1001: LYVPFLAQVF GIVPLSLNEW LLVLAVSLPV ILIDEVLKFV GRCTSGYRYS PRTLSTKQKE E

Arabidopsis Description

ECA1Calcium-transporting ATPase 1, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:P92939]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.