Factsheet for GSMUA_Achr10P13400_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
endoplasmic reticulum 1
golgi 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P15410_001	Banana	plasma membrane	72.31	72.07
GSMUA_Achr3P17740_001	Banana	plasma membrane	79.82	69.87
GSMUA_Achr2P16100_001	Banana	plasma membrane	70.07	68.68
CDY06279	Canola	plasma membrane	26.68	63.47
CDX95122	Canola	cytosol, plasma membrane, vacuole	20.85	60.78
VIT_08s0040g02830.t01	Wine grape	plasma membrane	72.42	60.77
VIT_06s0004g03900.t01	Wine grape	plasma membrane	72.09	60.6
KRG95874	Soybean	endoplasmic reticulum	71.86	60.47
KRH67591	Soybean	endoplasmic reticulum	71.64	60.28
AT1G07810.1	Thale cress	plasma membrane	70.85	59.57
AT1G07670.2	Thale cress	plasma membrane	70.74	59.47
CDY09907	Canola	plasma membrane	67.38	59.04
Bra031583.1-P	Field mustard	plasma membrane	63.79	59.02
Bra031593.1-P	Field mustard	plasma membrane	69.96	58.87
Solyc11g072880.1.1	Tomato	nucleus, plastid, unclear	69.96	58.81
CDY06268	Canola	plasma membrane	67.15	58.73
PGSC0003DMT400040184	Potato	plasma membrane	69.62	58.53
CDY22720	Canola	peroxisome, plasma membrane	65.58	58.09
CDY28053	Canola	plasma membrane	68.16	55.88
CDY35928	Canola	plasma membrane	65.02	55.66
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	23.88	55.04
GSMUA_Achr1P04000_001	Banana	plasma membrane	56.28	54.39
Bra029645.1-P	Field mustard	plasma membrane, plastid	69.62	52.01
CDY68458	Canola	cytosol, peroxisome, plasma membrane	38.23	51.2
GSMUA_AchrUn_...	Banana	peroxisome, plasma membrane, vacuole	30.38	50.28
CDY61305	Canola	cytosol	26.68	48.87
GSMUA_Achr6P23080_001	Banana	plasma membrane	42.04	38.07
GSMUA_AchrUn_...	Banana	mitochondrion, plasma membrane	10.43	28.97
GSMUA_Achr7P25650_001	Banana	plasma membrane	22.2	26.76
GSMUA_Achr6P16920_001	Banana	cytosol	23.09	26.75
GSMUA_Achr4P32520_001	Banana	plasma membrane	24.78	26.72
GSMUA_Achr4P10650_001	Banana	mitochondrion	22.31	25.13
GSMUA_Achr4P10940_001	Banana	cytosol	24.22	24.19
GSMUA_Achr9P17740_001	Banana	plasma membrane	21.64	23.8
GSMUA_Achr5P08080_001	Banana	plasma membrane	22.31	23.49
GSMUA_AchrUn_...	Banana	plasma membrane	23.21	23.42
GSMUA_Achr1P23580_001	Banana	plasma membrane	26.57	21.96
GSMUA_AchrUn_...	Banana	plasma membrane	26.23	20.35
GSMUA_AchrUn_...	Banana	plasma membrane	11.55	19.51
GSMUA_Achr4P05790_001	Banana	plasma membrane, plastid	25.11	19.46
GSMUA_Achr3P30070_001	Banana	cytosol, nucleus, plasma membrane	26.57	14.67

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr10G13400_001	EnsemblPlants:GSMUA_Achr10P13400_001	EnsemblPlants:GSMUA_Achr10T13400_001
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	UniProt:M0RHW6	PFAM:PF00122
PFAM:PF00689	PFAM:PF00690	PFAM:PF00702	PFAM:PF13246	PRINTS:PR00119	ScanProsite:PS00154
PANTHER:PTHR42861	PANTHER:PTHR42861:SF3	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TMHMM:TMhelix	UniParc:UPI0002957CB2	SEG:seg

Description

Calcium-transporting ATPase 1, endoplasmic reticulum-type [Source:GMGC_GENE;Acc:GSMUA_Achr10G13400_001]

Coordinates

chr10:+:22058878..22065359

Molecular Weight (calculated)

97574.2 Da

IEP (calculated)

5.145

GRAVY (calculated)

0.137

Length

892 amino acids

Sequence
(BLAST)

001: MGKGGQDEGK KGGLEPPTSN FPAWARTVHE CEAEFVVSAH DGLRSEEVVK LREIYGLNEL SKHSGPSIWQ LVLEQFNDTL VRILLVAAVV SFVLAWYDGD
101: EENNAEKALE ALKEIQSEHA SVRRNGELIP NLPAKELVPG DIVELKSEDI DIQGKECMVF AGTTVVNGSC ICLVIQTGMN TEIGKIHSQI HEASQSEDDT
201: PLKKKLNEFG EVLTAIIGVI CAVVWLINCT YYFEIAVALA VAAIPEGLPA VITTCLALGT RKMAQKNALV RKLPSVETLG CTTVICSDKT GTLTTNQMSA
301: VRLVAMGRWA DTLRTFKIAA VCNDASVNHS AHQFVTSGMP TEAALKVRTS IRTIVKSEID LVRNYTEPKR LCKCICEYNR LESNSFVYFV LVEKMGLPGG
401: YETSSLDSDE ILRCCKWWNG KAQRVATLEF DRSRKSMGVI VKSKSGTNSL LVKLCYSSYI SYCFSLQLIL IIEVILKIYA TDGQITILFV PTLGTLVHPH
501: SPGAVENLLE RSAYVQLLDG SVVVLDDRSK KFATYDGEDH PAHKILLDPS NYSSIETGLV FVGLVGLRDP PRSEVYKAIE DCRAAGIRVM VITGDNKETA
601: EAICRDIGVF TPDEEIHSKS LTGKEIVRLL REDGEVVAMT GDGVNDAPAL KMADIGIAMG IAGTEVAKEA SDMVLADDNF SSIVAAVGEG RSIYNNMKAF
701: IRYMISSNIG EVASIFLTAA LGIPEGLIPV QLLWVNLVTD GPPATALGFN PPDKDIMKKP PRRSDDSLIT AWILFRYMVI GLYVGIATVG IFIIWYTHEC
801: SSWEGFKAMT LSLSVLVAIE MFNSLNALSE DGSLLSMPPW ANPWLLLAIF KEWLLVLAVA FPVILIDEVL KFVGRHTSSS GAKNWSAKHK DE

Best Arabidopsis Sequence Match ( AT1G07810.1 )
(BLAST)

0001: MGKGSEDLVK KESLNSTPVN SDTFPAWAKD VAECEEHFVV SREKGLSSDE VLKRHQIYGL NELEKPEGTS IFKLILEQFN DTLVRILLAA AVISFVLAFF
0101: DGDEGGEMGI TAFVEPLVIF LILIVNAIVG IWQETNAEKA LEALKEIQSQ QATVMRDGTK VSSLPAKELV PGDIVELRVG DKVPADMRVV ALISSTLRVE
0201: QGSLTGESEA VSKTTKHVDE NADIQGKKCM VFAGTTVVNG NCICLVTDTG MNTEIGRVHS QIQEAAQHEE DTPLKKKLNE FGEVLTMIIG LICALVWLIN
0301: VKYFLSWEYV DGWPRNFKFS FEKCTYYFEI AVALAVAAIP EGLPAVITTC LALGTRKMAQ KNALVRKLPS VETLGCTTVI CSDKTGTLTT NQMAVSKLVA
0401: MGSRIGTLRS FNVEGTSFDP RDGKIEDWPM GRMDANLQMI AKIAAICNDA NVEQSDQQFV SRGMPTEAAL KVLVEKMGFP EGLNEASSDG DVLRCCRLWS
0501: ELEQRIATLE FDRDRKSMGV MVDSSSGNKL LLVKGAVENV LERSTHIQLL DGSKRELDQY SRDLILQSLR DMSLSALRCL GFAYSDVPSD FATYDGSEDH
0601: PAHQQLLNPS NYSSIESNLI FVGFVGLRDP PRKEVRQAIA DCRTAGIRVM VITGDNKSTA EAICREIGVF EADEDISSRS LTGIEFMDVQ DQKNHLRQTG
0701: GLLFSRAEPK HKQEIVRLLK EDGEVVAMTG DGVNDAPALK LADIGVAMGI SGTEVAKEAS DMVLADDNFS TIVAAVGEGR SIYNNMKAFI RYMISSNIGE
0801: VASIFLTAAL GIPEGMIPVQ LLWVNLVTDG PPATALGFNP PDKDIMKKPP RRSDDSLITA WILFRYMVIG LYVGVATVGV FIIWYTHSSF MGIDLSQDGH
0901: SLVSYSQLAH WGQCSSWEGF KVSPFTAGSQ TFSFDSNPCD YFQQGKIKAS TLSLSVLVAI EMFNSLNALS EDGSLVTMPP WVNPWLLLAM AVSFGLHFVI
1001: LYVPFLAQVF GIVPLSLNEW LLVLAVSLPV ILIDEVLKFV GRCTSGYRYS PRTLSTKQKE E

Arabidopsis Description

ECA1Calcium-transporting ATPase 1, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:P92939]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.