Factsheet for GSMUA_Achr6P23080_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 6
plastid 1
golgi 4
extracellular 3
endoplasmic reticulum 3
vacuole 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plasma membrane
iPSORT:	plastid
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g08850.t01	Wine grape	plasma membrane	79.9	84.9
Solyc07g022790.2.1	Tomato	plasma membrane	34.11	84.85
KXG37640	Sorghum	plasma membrane	85.28	84.0
Zm00001d033886_P001	Maize	mitochondrion	82.33	83.95
HORVU4Hr1G010200.3	Barley	plasma membrane	84.87	83.6
TraesCS4D01G060900.1	Wheat	plasma membrane	84.67	83.4
TraesCS4B01G061900.1	Wheat	plasma membrane	84.57	83.3
TraesCS4A01G253500.1	Wheat	peroxisome	84.57	83.3
KRH61432	Soybean	plasma membrane	83.65	82.32
Os03t0730800-01	Rice	plasma membrane	53.1	81.72
CDX94924	Canola	plasma membrane	67.92	80.7
CDY70305	Canola	plasma membrane	20.1	80.49
Solyc07g022780.2.1	Tomato	mitochondrion	29.75	80.05
AT1G10130.1	Thale cress	plasma membrane	80.81	79.76
CDY22604	Canola	plasma membrane	79.7	78.66
CDY53835	Canola	nucleus, plasma membrane, plastid	22.64	72.4
Bra031701.1-P	Field mustard	plasma membrane	78.68	71.43
Bra019960.1-P	Field mustard	plasma membrane	72.18	68.04
CDX93457	Canola	cytosol, nucleus, plasma membrane	71.37	58.34
GSMUA_Achr2P16100_001	Banana	plasma membrane	42.23	45.71
GSMUA_AchrUn_...	Banana	peroxisome, plasma membrane, vacuole	24.57	44.9
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	17.06	43.41
GSMUA_Achr6P15410_001	Banana	plasma membrane	39.39	43.35
GSMUA_Achr10P...	Banana	plasma membrane	38.07	42.04
GSMUA_Achr3P17740_001	Banana	plasma membrane	41.83	40.43
GSMUA_Achr1P04000_001	Banana	plasma membrane	37.87	40.41
GSMUA_AchrUn_...	Banana	mitochondrion, plasma membrane	10.25	31.46
GSMUA_Achr4P32520_001	Banana	plasma membrane	23.45	27.93
GSMUA_Achr9P17740_001	Banana	plasma membrane	22.23	27.0
GSMUA_AchrUn_...	Banana	plasma membrane	23.96	26.7
GSMUA_Achr7P25650_001	Banana	plasma membrane	20.0	26.62
GSMUA_Achr4P10650_001	Banana	mitochondrion	21.02	26.14
GSMUA_Achr6P16920_001	Banana	cytosol	20.3	25.97
GSMUA_Achr5P08080_001	Banana	plasma membrane	21.52	25.03
GSMUA_Achr4P10940_001	Banana	cytosol	22.23	24.52
GSMUA_Achr1P23580_001	Banana	plasma membrane	26.7	24.37
GSMUA_AchrUn_...	Banana	plasma membrane	26.19	22.43
GSMUA_Achr4P05790_001	Banana	plasma membrane, plastid	24.67	21.11
GSMUA_AchrUn_...	Banana	plasma membrane	10.96	20.45
GSMUA_Achr3P30070_001	Banana	cytosol, nucleus, plasma membrane	24.47	14.91

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.60.120.1500	MapMan:24.1.2.2.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005783
GO:GO:0005794	GO:GO:0005802	GO:GO:0006810	GO:GO:0006811	GO:GO:0006816	GO:GO:0007275
GO:GO:0008150	GO:GO:0012505	GO:GO:0015410	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0033017	GO:GO:0048364	GO:GO:0055071	GO:GO:0070588	GO:GO:0071421	GO:GO:0099132
EnsemblPlantsGene:GSMUA_Achr6G23080_001	EnsemblPlants:GSMUA_Achr6P23080_001	EnsemblPlants:GSMUA_Achr6T23080_001	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
InterPro:IPR023299	UniProt:M0T9F6	InterPro:P-type_ATPase_IIA	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690
PFAM:PF00702	PFAM:PF13246	PRINTS:PR00119	ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF6
InterPro:P_typ_ATPase	InterPro:SERCA3	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665
SignalP:SignalP-TM	TIGRFAMs:TIGR01116	TIGRFAMs:TIGR01494	TMHMM:TMhelix	UniParc:UPI000294A0EC	SEG:seg

Description

Calcium-transporting ATPase 3, endoplasmic reticulum-type [Source:GMGC_GENE;Acc:GSMUA_Achr6G23080_001]

Coordinates

chr6:-:23110086..23163022

Molecular Weight (calculated)

108149.0 Da

IEP (calculated)

7.060

GRAVY (calculated)

0.269

Length

985 amino acids

Sequence
(BLAST)

001: MSSKILGLFL VILSNLKAGR SLLKECTPFW KRVLNQFDDL LVKILIAAAI VSFLLALING ETGLTAFLEP SVIFMILAAN AAVGVITETN AEKALVELRA
101: YQADVATVLR NGCFSILPAT ELVPGDIVEV GVGCKVPADM RMVEMLSSQL RVDQAILTGE SCSVAKDLES TVATNAVYQD KTNILFSGTV VVAGRARAIV
201: VGVGSNTAMG SIRDAMLRTV DEATPLKKKL DEFGTFLAKV IAGICVLVWV VNIGHFRDPS HGGFMRGAIH YFKIAVALAV AAIPEGLPAV VTTCLALGTK
301: RMARLNAIVR SLPSVETLGC TTVICSDKTG TLTTNMMSVS KVCVVQSVHR GPITNDYAVT GTTFAPEGMI FDSAGMQLEF PAQFPCLLHI AMCSALCNES
401: ILQYNPDKKN YDKIGESTEV ALRVLVEKVG LPGFDSMPSA LNILSKHERA SYCNRYWEHQ FKKICVLEFS RDRKMMSVLC SRKQQEIMFS KGAPESIITR
501: CTHILCNEDG SSIPLTTDIR NELDERFKSF AGKDTLRCLA LALKRMPMGQ QTICHEDETN LTFIGLVGML DPPREEVRNA ILSCMSAGIR VIVVTGDNKT
601: TAESLCRRIG AFEHLGDFTG YSYTASEFEE LPPLQQTLAL QRMVLFTRYI KPLVEPSHKK MLVEALQNQN EVVAMTGDGV NDAPALKKAD IGIAMGSGTA
701: VAKSASDMVL ADDNFASIVA AVAEGRAIYN NTKQFIRYMI SSNIGEVVCI FVAAVLGMPD TLVPVQLLWV NLVTDGLPAT AIGFNKQDTD VMMAKPRKVS
801: EAVVTGWLFF RYLVIGAYVG LATITGFVWW FVYSDKGPKL PYYELVNFDS CPTRETSYPC SIFDDRHPST VSMTVLVVVE MFNALNNLSE NQSLLVIPPW
901: SNPWLLASIA LTMLLHVVIL YVEPLSMLFS VTPLSWTEWT IVMYLSFPVI IIDEVLKFFS RNSRGRRFGF RFRRPDALPR EARDK

Best Arabidopsis Sequence Match ( AT1G10130.1 )
(BLAST)

001: MEDAYARSVS EVLDFFGVDP TKGLSDSQVV HHSRLYGRNV LPEEKRTPFW KLVLKQFDDL LVKILIVAAI VSFVLALANG ETGLTAFLEP FVILLILAAN
101: AAVGVITETN AEKALEELRA YQANIATVLR NGCFSILPAT ELVPGDIVEV TVGCKIPADL RMIEMSSNTF RVDQAILTGE SCSVEKDVDC TLTTNAVYQD
201: KKNILFSGTD VVAGRGRAVV IGVGSNTAMG SIHDSMLQTD DEATPLKKKL DEFGSFLAKV IAGICVLVWV VNIGHFSDPS HGGFFKGAIH YFKIAVALAV
301: AAIPEGLPAV VTTCLALGTK KMARLNAIVR SLPSVETLGC TTVICSDKTG TLTTNMMSVS KICVVQSAEH GPMINEFTVS GTTYAPEGTV FDSNGMQLDL
401: PAQSPCLHHL AMCSSLCNDS ILQYNPDKDS YEKIGESTEV ALRVLAEKVG LPGFDSMPSA LNMLSKHERA SYCNHYWENQ FKKVYVLEFT RDRKMMSVLC
501: SHKQMDVMFS KGAPESIIAR CNKILCNGDG SVVPLTAAGR AELESRFYSF GDETLRCLAL AFKTVPHGQQ TISYDNENDL TFIGLVGMLD PPREEVRDAM
601: LACMTAGIRV IVVTGDNKST AESLCRKIGA FDNLVDFSGM SYTASEFERL PAVQQTLALR RMTLFSRVEP SHKRMLVEAL QKQNEVVAMT GDGVNDAPAL
701: KKADIGIAMG SGTAVAKSAS DMVLADDNFA SIVAAVAEGR AIYNNTKQFI RYMISSNIGE VVCIFVAAVL GIPDTLAPVQ LLWVNLVTDG LPATAIGFNK
801: QDSDVMKAKP RKVGEAVVTG WLFFRYLVIG VYVGLATVAG FIWWFVYSDG GPKLTYSELM NFETCALRET TYPCSIFEDR HPSTVAMTVL VVVEMFNALN
901: NLSENQSLLV ITPRSNLWLV GSIILTMLLH VLILYVHPLA VLFSVTPLSW AEWTAVLYLS FPVIIIDELL KFLSRNTGMR FRFRLRKADL LPKDRRDK

Arabidopsis Description

ECA3Calcium-transporting ATPase 3, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:Q9SY55]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.