Factsheet for Zm00001d033886_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	peroxisome, secretory
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37640	Sorghum	plasma membrane	98.55	95.2
TraesCS4D01G060900.1	Wheat	plasma membrane	94.62	91.4
HORVU4Hr1G010200.3	Barley	plasma membrane	94.51	91.3
TraesCS4B01G061900.1	Wheat	plasma membrane	94.2	91.0
TraesCS4A01G253500.1	Wheat	peroxisome	94.2	91.0
Os03t0730800-01	Rice	plasma membrane	58.49	88.28
GSMUA_Achr6P23080_001	Banana	plasma membrane	83.95	82.33
Solyc07g022790.2.1	Tomato	plasma membrane	33.64	82.07
KRH61432	Soybean	plasma membrane	82.3	79.42
VIT_18s0001g08850.t01	Wine grape	plasma membrane	76.19	79.4
CDY70305	Canola	plasma membrane	19.88	78.05
AT1G10130.1	Thale cress	plasma membrane	80.23	77.66
CDY22604	Canola	plasma membrane	79.19	76.65
CDX94924	Canola	plasma membrane	64.39	75.03
CDY53835	Canola	nucleus, plasma membrane, plastid	22.88	71.75
Solyc07g022780.2.1	Tomato	mitochondrion	27.12	71.58
Bra031701.1-P	Field mustard	plasma membrane	78.05	69.49
Bra019960.1-P	Field mustard	plasma membrane	71.74	66.32
CDX93457	Canola	cytosol, nucleus, plasma membrane	68.53	54.94
Zm00001d011013_P001	Maize	plasma membrane	48.34	44.39
Zm00001d028687_P001	Maize	extracellular, mitochondrion	48.03	43.73
Zm00001d047769_P001	Maize	plasma membrane	48.03	43.69
Zm00001d052457_P001	Maize	plasma membrane	26.6	25.93
Zm00001d023258_P002	Maize	plasma membrane	27.74	25.62
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	26.71	25.44
Zm00001d052856_P001	Maize	plasma membrane	26.4	25.0
Zm00001d033334_P001	Maize	plastid	26.71	24.95
Zm00001d031341_P001	Maize	plasma membrane	6.63	24.9
Zm00001d030893_P004	Maize	plasma membrane	26.29	24.9
Zm00001d011896_P001	Maize	cytosol, nucleus, plasma membrane	26.92	24.83
Zm00001d002396_P012	Maize	nucleus, plasma membrane, plastid	27.85	24.79
Zm00001d038576_P001	Maize	plasma membrane, plastid	26.71	24.78
Zm00001d031340_P001	Maize	cytosol	20.19	24.68
Zm00001d042164_P002	Maize	cytosol, nucleus, plasma membrane	26.4	24.4
Zm00001d028093_P001	Maize	plasma membrane	26.29	24.05
Zm00001d020985_P002	Maize	cytosol, peroxisome, plasma membrane	27.43	23.16
Zm00001d031543_P005	Maize	cytosol	26.6	23.13
Zm00001d043925_P001	Maize	plasma membrane	14.91	22.93
Zm00001d026253_P002	Maize	peroxisome, plasma membrane, plastid	25.98	22.74
Zm00001d015446_P016	Maize	plasma membrane	26.29	22.6

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	UniProt:A0A1D6L337
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0006810	GO:GO:0007275	GO:GO:0008150
GO:GO:0012505	GO:GO:0015410	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0048364
GO:GO:0055071	GO:GO:0070588	GO:GO:0071421	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	InterPro:IPR023299	ProteinID:ONM08877.1	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690
PFAM:PF00702	PRINTS:PR00119	ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF18	InterPro:P_typ_ATPase
SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494
TMHMM:TMhelix	UniParc:UPI00084570B9	EnsemblPlantsGene:Zm00001d033886	EnsemblPlants:Zm00001d033886_P001	EnsemblPlants:Zm00001d033886_T001	SEG:seg

Description

calcium pump4 calcium pump4

Coordinates

chr1:-:277447305..277479291

Molecular Weight (calculated)

105754.0 Da

IEP (calculated)

5.908

GRAVY (calculated)

0.219

Length

966 amino acids

Sequence
(BLAST)

001: MEDAYAKSVA EVLEAFGVDQ TKGLSDSQVE QHARLYGKNV LPQEESTPFW KLVLKQFDDL LVKILIAAAV ISFLLARMNG ETGLSAFLEP SVIFMILAAN
101: AAVGVITETN AEKALEELRA YQADIATVLR NGCFSILPAT ELVPGDIVEV GVGCKVPADM RMVEMLSHQL RVDQAILTGE SCSVAKEVES TPAMNAVYQD
201: KTNILFSGTV VVAGRARAIV IGIGSNTAMG SIRDAMLRTE DEATPLKKKL DEFGTFLAKV IAGICILVWV VNIGHFRDPS HGGFVRGAIH YFKVAVALAV
301: AAIPEGLPAV VTTCLALGTK RMARLNAIVR SLPSVETLGC TTVICSDKTG TLTTNMMSVS KVCVVRSVHQ RPMTDEYSIS GTTFAPDGFI YDADGLQLEF
401: PPQSPCLLHL AMCSALCNES TLQYNPDKKS YEKIGESTEV ALRVLVEKIS VLEFSRDRKM MSVLCSRKHQ EIMFSKGAPE SIMARCTHIL CNDDGSSVPL
501: TMDIRNELEA RFQSFAGKDT LRCLALALKR MPAGQQSICY GDEANLTFIG LVGMLDPPRE EVWDAIHSCM SAGIRVIVVT GDNKSTAESL CRQIGAFEHL
601: NDFSGYSYTA SEFEGLPPLE RTNALQRMVL FSRVEPSHKK MLVEALQAHN EVVAMTGDGV NDAPALKKAD IGIAMGSGTA VAKSASDMVL ADDNFATIVA
701: AVAEGRAIYN NTKQFIRYMI SSNIGEVVCI FVAAVLGMPD TLIPVQLLWV NLVTDGLPAT AIGFNKPDGN IMSVKPRKVN EAVVSGWLFF RYLVIGAYVG
801: LATIAGFVWW FVYSDNGPKL PYSELVNFDS CSTRQTSYSC SIFEDRHPST VSMTVLVVVE MFNALNNLSE NQSLLVIHPW SNLWLVGSII LTMLLHVAVL
901: YIEPLSALFS VSPLSWVEWK IVLYLSFPVI LIDEVLKFFS RRSPRGRRFP LRLWRREILP KESRDN

Best Arabidopsis Sequence Match ( AT1G10130.1 )
(BLAST)

001: MEDAYARSVS EVLDFFGVDP TKGLSDSQVV HHSRLYGRNV LPEEKRTPFW KLVLKQFDDL LVKILIVAAI VSFVLALANG ETGLTAFLEP FVILLILAAN
101: AAVGVITETN AEKALEELRA YQANIATVLR NGCFSILPAT ELVPGDIVEV TVGCKIPADL RMIEMSSNTF RVDQAILTGE SCSVEKDVDC TLTTNAVYQD
201: KKNILFSGTD VVAGRGRAVV IGVGSNTAMG SIHDSMLQTD DEATPLKKKL DEFGSFLAKV IAGICVLVWV VNIGHFSDPS HGGFFKGAIH YFKIAVALAV
301: AAIPEGLPAV VTTCLALGTK KMARLNAIVR SLPSVETLGC TTVICSDKTG TLTTNMMSVS KICVVQSAEH GPMINEFTVS GTTYAPEGTV FDSNGMQLDL
401: PAQSPCLHHL AMCSSLCNDS ILQYNPDKDS YEKIGESTEV ALRVLAEKVG LPGFDSMPSA LNMLSKHERA SYCNHYWENQ FKKVYVLEFT RDRKMMSVLC
501: SHKQMDVMFS KGAPESIIAR CNKILCNGDG SVVPLTAAGR AELESRFYSF GDETLRCLAL AFKTVPHGQQ TISYDNENDL TFIGLVGMLD PPREEVRDAM
601: LACMTAGIRV IVVTGDNKST AESLCRKIGA FDNLVDFSGM SYTASEFERL PAVQQTLALR RMTLFSRVEP SHKRMLVEAL QKQNEVVAMT GDGVNDAPAL
701: KKADIGIAMG SGTAVAKSAS DMVLADDNFA SIVAAVAEGR AIYNNTKQFI RYMISSNIGE VVCIFVAAVL GIPDTLAPVQ LLWVNLVTDG LPATAIGFNK
801: QDSDVMKAKP RKVGEAVVTG WLFFRYLVIG VYVGLATVAG FIWWFVYSDG GPKLTYSELM NFETCALRET TYPCSIFEDR HPSTVAMTVL VVVEMFNALN
901: NLSENQSLLV ITPRSNLWLV GSIILTMLLH VLILYVHPLA VLFSVTPLSW AEWTAVLYLS FPVIIIDELL KFLSRNTGMR FRFRLRKADL LPKDRRDK

Arabidopsis Description

ECA3Calcium-transporting ATPase 3, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:Q9SY55]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.